Gene description for RPS16
Gene name ribosomal protein S16
Gene symbol RPS16
Other names/aliases S16
Species Homo sapiens
 Database cross references - RPS16
ExoCarta ExoCarta_6217
Vesiclepedia VP_6217
Entrez Gene 6217
HGNC 10396
MIM 603675
UniProt P62249  
 RPS16 identified in exosomes derived from the following tissue/cell type
B cells 20458337    
B cells 20458337    
B cells 20458337    
Bladder cancer cells 20224111    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Colorectal cancer cells 19837982    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Colorectal cancer cells 34887515    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Foreskin fibroblasts 34108659    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocytes 26054723    
Keratinocytes 19530224    
Keratinocytes 19530224    
Lymphoma cells 34108659    
Mammary cancer-associated fibroblasts 34108659    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Mesenchymal stem cells Unpublished / Not applicable
Mesenchymal stem cells 36408942    
Monocytic leukemia cells 34108659    
Neuroblastoma cells 25944692    
Normal mammary epithelial cells 34108659    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pluripotent stem cells 34108659    
Squamous carcinoma cells 20124223    
T lymphocytes 34108659    
Thymus 23844026    
 Gene ontology annotations for RPS16
Molecular Function
    RNA binding GO:0003723 HDA
    RNA binding GO:0003723 IBA
    RNA binding GO:0003723 IDA
    structural constituent of ribosome GO:0003735 HDA
    structural constituent of ribosome GO:0003735 IBA
    structural constituent of ribosome GO:0003735 IDA
    structural constituent of ribosome GO:0003735 IMP
    protein binding GO:0005515 IPI
Biological Process
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000462 IBA
    cytoplasmic translation GO:0002181 IC
    cytoplasmic translation GO:0002181 NAS
    rRNA processing GO:0006364 IMP
    translation GO:0006412 IC
    translation GO:0006412 NAS
    ribosomal small subunit biogenesis GO:0042274 IDA
    ribosomal small subunit biogenesis GO:0042274 IMP
    cellular response to leukemia inhibitory factor GO:1990830 IEA
Subcellular Localization
    nucleoplasm GO:0005654 TAS
    nucleolus GO:0005730 IEA
    cytoplasm GO:0005737 NAS
    cytosol GO:0005829 TAS
    focal adhesion GO:0005925 HDA
    small ribosomal subunit GO:0015935 HDA
    membrane GO:0016020 HDA
    cytosolic ribosome GO:0022626 IDA
    cytosolic small ribosomal subunit GO:0022627 HDA
    cytosolic small ribosomal subunit GO:0022627 IBA
    cytosolic small ribosomal subunit GO:0022627 IDA
    cytosolic small ribosomal subunit GO:0022627 NAS
    small-subunit processome GO:0032040 IDA
    synapse GO:0045202 IEA
    extracellular exosome GO:0070062 HDA
 Experiment description of studies that identified RPS16 in exosomes
1
Experiment ID 79
MISEV standards
Biophysical techniques
CD81|MHCII
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 1
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
2
Experiment ID 80
MISEV standards
Biophysical techniques
CD81|MHCII
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis -Sample 2
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
3
Experiment ID 81
MISEV standards
Biophysical techniques
CD81|MHCII
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 3
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
4
Experiment ID 76
MISEV standards
EM
Biophysical techniques
TSG101|GAPDH|HSP90|CD81|CD9|CD63|LAMP1|MHCI
Enriched markers
HSP90B1
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20224111    
Organism Homo sapiens
Experiment description Proteomics analysis of bladder cancer exosomes.
Authors "Welton JL, Khanna S, Giles PJ, Brennan P, Brewis IA, Staffurth J, Mason MD, Clayton A."
Journal name MCP
Publication year 2010
Sample Bladder cancer cells
Sample name HT1376
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.10-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [MALDI TOF/TOF]
Western blotting
FACS
5
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
6
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
7
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
8
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
9
Experiment ID 412
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX|ACTB
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MCF7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
10
Experiment ID 414
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
11
Experiment ID 426
MISEV standards
Biophysical techniques
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
12
Experiment ID 427
MISEV standards
Biophysical techniques
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
13
Experiment ID 494
MISEV standards
EM
Biophysical techniques
CD9|CD81|CD151|CD63|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Osteoarthritic cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
14
Experiment ID 496
MISEV standards
Biophysical techniques
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Healthy cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
15
Experiment ID 497
MISEV standards
Biophysical techniques
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
16
Experiment ID 498
MISEV standards
EM
Biophysical techniques
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
17
Experiment ID 21
MISEV standards
EM|IEM
Biophysical techniques
Alix|TSG101|HSP70|CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method
Mass spectrometry   
PubMed ID 19837982    
Organism Homo sapiens
Experiment description Proteomic and bioinformatic analysis of immunoaffinity-purified exosomes derived from the human colon tumor cell line LIM1215.
Authors "Suresh Mathivanan, Justin W.E. Lim, Bow J. Tauro, Hong Ji, Robert L. Moritz and Richard J. Simpson"
Journal name MCP
Publication year 2009
Sample Colorectal cancer cells
Sample name LIM1215
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.10-1.12 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [Orbitrap]
Western blotting
18
Experiment ID 207
MISEV standards
EM
Biophysical techniques
TSG101|HSP70|FLOT1
Enriched markers
VDAC
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DKO-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
19
Experiment ID 208
MISEV standards
EM
Biophysical techniques
TSG101|HSP70|FLOT1
Enriched markers
VDAC
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name Dks-8
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
20
Experiment ID 209
MISEV standards
Biophysical techniques
TSG101|HSP70|FLOT1
Enriched markers
VDAC
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DLD-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
21
Experiment ID 282
MISEV standards
CEM
Biophysical techniques
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
Negative markers
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Ultracentrifugation - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
22
Experiment ID 283
MISEV standards
CEM
Biophysical techniques
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
Negative markers
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Ultracentrifugation - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
23
Experiment ID 285
MISEV standards
CEM
Biophysical techniques
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
Negative markers
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Sequential centrifugal ultrafiltration - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Sequential centrifugal ultrafiltration
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
24
Experiment ID 286
MISEV standards
CEM
Biophysical techniques
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
Negative markers
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Sequential centrifugal ultrafiltration - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Sequential centrifugal ultrafiltration
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
25
Experiment ID 1203
MISEV standards
EM
Biophysical techniques
SDCBP|FLOT1|CD9|CD81|CD63|EPCAM|GAPDH|LAMP1|TFRC|CD151|CD82|LAMP2|RAB35|TSG101|FLOT2|RAB5B|ICAM1|RAB5A
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 34887515    
Organism Homo sapiens
Experiment description Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets
Authors "Zhang Q, Jeppesen DK, Higginbotham JN, Graves-Deal R, Trinh VQ, Ramirez MA, Sohn Y, Neininger AC, Taneja N, McKinley ET, Niitsu H, Cao Z, Evans R, Glass SE, Ray KC, Fissell WH, Hill S, Rose KL, Huh WJ, Washington MK, Ayers GD, Burnette DT, Sharma S, Rome LH, Franklin JL, Lee YA, Liu Q, Coffey RJ."
Journal name Nat Cell Biol
Publication year 2021
Sample Colorectal cancer cells
Sample name DiFi
Isolation/purification methods Differential centrifugation
Filtration
Centrifugal ultrafiltration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
miRNA
Methods used in the study Western blotting
Mass spectrometry
RNA sequencing
26
Experiment ID 407
MISEV standards
EM
Biophysical techniques
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
27
Experiment ID 419
MISEV standards
Biophysical techniques
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
28
Experiment ID 419
MISEV standards
Biophysical techniques
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
29
Experiment ID 420
MISEV standards
Biophysical techniques
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
30
Experiment ID 420
MISEV standards
Biophysical techniques
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
31
Experiment ID 405
MISEV standards
EM
Biophysical techniques
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Foreskin fibroblasts
Sample name BJ
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
32
Experiment ID 363
MISEV standards
Biophysical techniques
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
DCLK1
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
33
Experiment ID 364
MISEV standards
Biophysical techniques
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
DCLK1
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
34
Experiment ID 365
MISEV standards
Biophysical techniques
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
DCLK1
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
35
Experiment ID 234
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-C3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
36
Experiment ID 235
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
37
Experiment ID 236
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name MHCC97L
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
38
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
39
Experiment ID 189
MISEV standards
EM
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19530224    
Organism Homo sapiens
Experiment description Profile of exosomes related proteins released by differentiated and undifferentiated human keratinocytes.
Authors "Chavez-Muñoz C, Kilani RT, Ghahary A."
Journal name J Cell Physiol
Publication year 2009
Sample Keratinocytes
Sample name Keratinocytes - Differentiated
Isolation/purification methods Differential centrifugation
Filtration
Sucrose cushion
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
40
Experiment ID 190
MISEV standards
EM
Biophysical techniques
HSC70
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19530224    
Organism Homo sapiens
Experiment description Profile of exosomes related proteins released by differentiated and undifferentiated human keratinocytes.
Authors "Chavez-Muñoz C, Kilani RT, Ghahary A."
Journal name J Cell Physiol
Publication year 2009
Sample Keratinocytes
Sample name Keratinocytes - Undifferentiated
Isolation/purification methods Differential centrifugation
Filtration
Sucrose cushion
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
41
Experiment ID 417
MISEV standards
EM
Biophysical techniques
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX|ACTB
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Lymphoma cells
Sample name Raji
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
42
Experiment ID 411
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Mammary cancer-associated fibroblasts
Sample name mCAF
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
43
Experiment ID 254
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1|CD81
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name MNT-1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
44
Experiment ID 255
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name G1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
45
Experiment ID 256
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 501mel
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
46
Experiment ID 257
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name Daju
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
47
Experiment ID 258
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1|CD81
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name SKMEL28
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
48
Experiment ID 259
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name A375M
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
49
Experiment ID 260
MISEV standards
EM
Biophysical techniques
TSG101|FLOT1|CD81
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 1205Lu
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
50
Experiment ID 126
MISEV standards
Biophysical techniques
GAPDH
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [LTQ-FT Ultra]
PubMed ID Unpublished / Not applicable
Organism Homo sapiens
Experiment description Mesenchymal Stem Cell Exosomes: The Future MSC-based Therapy?
Authors "Ruenn Chai Lai, Ronne Wee Yeh Yeo, Soon Sim Tan, Bin Zhang, Yijun Yin, Newman Siu Kwan Sze, Andre Choo, and Sai Kiang Lim"
Journal name Mesenchymal Stem Cell Therapy
Publication year 2011
Sample Mesenchymal stem cells
Sample name huES9.E1
Isolation/purification methods HPLC
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Antobody array
Mass spectrometry
51
Experiment ID 488
MISEV standards
EM
Biophysical techniques
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
52
Experiment ID 418
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
53
Experiment ID 224
MISEV standards
EM|AFM
Biophysical techniques
Alix|TSG101|CD63|CD81
Enriched markers
GOLGA2
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25944692    
Organism Homo sapiens
Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name Oncotarget
Publication year 2015
Sample Neuroblastoma cells
Sample name SH-SY5Y
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
54
Experiment ID 413
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Normal mammary epithelial cells
Sample name MCF10A
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
55
Experiment ID 211
MISEV standards
EM
Biophysical techniques
TSG101|Alix|EpCAM|TFRC
Enriched markers
cytochrome c|GOLGA2
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
56
Experiment ID 212
MISEV standards
CEM
Biophysical techniques
TSG101|Alix|EpCAM|TFRC
Enriched markers
Cytochrome C|GOLGA2
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
57
Experiment ID 406
MISEV standards
EM
Biophysical techniques
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name BxPC3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
58
Experiment ID 415
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
59
Experiment ID 434
MISEV standards
Biophysical techniques
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
60
Experiment ID 435
MISEV standards
Biophysical techniques
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
CANX
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
61
Experiment ID 408
MISEV standards
EM
Biophysical techniques
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX|ACTB
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPDE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
62
Experiment ID 409
MISEV standards
EM
Biophysical techniques
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPNE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
63
Experiment ID 416
MISEV standards
EM
Biophysical techniques
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pluripotent stem cells
Sample name PSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
64
Experiment ID 191
MISEV standards
Biophysical techniques
Alix|CD81|CD9
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20124223    
Organism Homo sapiens
Experiment description Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors "Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK."
Journal name Mol Cell Proteomics
Publication year 2010
Sample Squamous carcinoma cells
Sample name Squamous carcinoma cell (A431)
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
65
Experiment ID 410
MISEV standards
EM
Biophysical techniques
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample T lymphocytes
Sample name Jurkat
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
66
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RPS16
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 EIF3A 8661
Affinity Capture-MS Homo sapiens
2 RPSAP58 388524
Affinity Capture-MS Homo sapiens
3 HDAC4  
Affinity Capture-MS Homo sapiens
4 WDR6 11180
Affinity Capture-MS Homo sapiens
5 TRMT1L 81627
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
6 UBL4A 8266
Affinity Capture-MS Homo sapiens
7 ZBTB11  
Affinity Capture-MS Homo sapiens
8 ZNF346  
Affinity Capture-MS Homo sapiens
9 SKIV2L 6499
Affinity Capture-MS Homo sapiens
10 EIF3C 8663
Affinity Capture-MS Homo sapiens
11 RIN3  
Affinity Capture-MS Homo sapiens
12 SKI 6497
Affinity Capture-MS Homo sapiens
13 ZNF668  
Affinity Capture-MS Homo sapiens
14 TOP3B 8940
Affinity Capture-MS Homo sapiens
15 EBNA-LP  
Affinity Capture-MS
16 KIF20A 10112
Affinity Capture-MS Homo sapiens
17 CSNK2A1 1457
Affinity Capture-MS Homo sapiens
18 ZNF92  
Affinity Capture-MS Homo sapiens
19 UTP3 57050
Affinity Capture-MS Homo sapiens
20 SOX2  
Affinity Capture-MS Homo sapiens
21 RIOK1 83732
Co-crystal Structure Homo sapiens
22 DDX23 9416
Affinity Capture-MS Homo sapiens
23 RPS2 6187
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
24 IGF2BP3 10643
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
25 RBM28 55131
Affinity Capture-MS Homo sapiens
26 DARS 1615
Affinity Capture-MS Homo sapiens
27 KIF23 9493
Affinity Capture-MS Homo sapiens
28 NDRG1 10397
Affinity Capture-MS Homo sapiens
29 CDH2 1000
Co-fractionation Homo sapiens
30 METAP2 10988
Affinity Capture-MS Homo sapiens
31 BHLHA15  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
32 RPS9 6203
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
33 GSPT1 2935
Affinity Capture-MS Homo sapiens
34 EIF3E 3646
Affinity Capture-MS Homo sapiens
35 FAM207A  
Co-crystal Structure Homo sapiens
Affinity Capture-MS Homo sapiens
36 EXOSC4 54512
Affinity Capture-MS Homo sapiens
37 CENPQ  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
38 SFN 2810
Affinity Capture-MS Homo sapiens
39 ZNF598 90850
Affinity Capture-MS Homo sapiens
40 MECP2 4204
Affinity Capture-MS Homo sapiens
41 ARIH2 10425
Affinity Capture-MS Homo sapiens
42 NMT1 4836
Affinity Capture-MS Homo sapiens
43 RPS11 6205
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
44 MLEC 9761
Co-fractionation Homo sapiens
45 RPL19 6143
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
46 SRPK2 6733
Affinity Capture-MS Homo sapiens
47 KIF14 9928
Affinity Capture-MS Homo sapiens
48 EXOSC9 5393
Affinity Capture-MS Homo sapiens
49 EMC9  
Affinity Capture-MS Homo sapiens
50 TFB1M  
Affinity Capture-MS Homo sapiens
51 CHMP4C 92421
Affinity Capture-MS Homo sapiens
52 AURKA 6790
Affinity Capture-MS Homo sapiens
53 RPL17 6139
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
54 TSR1 55720
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
55 LIN28B  
Affinity Capture-MS Homo sapiens
56 SRPRB 58477
Affinity Capture-MS Homo sapiens
57 ANKRD17 26057
Affinity Capture-MS Homo sapiens
58 MEPCE 56257
Affinity Capture-MS Homo sapiens
59 TARBP2  
Affinity Capture-MS Homo sapiens
60 YBX2 51087
Affinity Capture-MS Homo sapiens
61 TUFM 7284
Co-fractionation Homo sapiens
62 PURG  
Affinity Capture-MS Homo sapiens
63 HIST1H2AM 8336
Affinity Capture-MS Homo sapiens
64 RPL18A 6142
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
65 ESRRB  
Affinity Capture-MS Homo sapiens
66 PABPC1 26986
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
67 Srp72  
Affinity Capture-MS Mus musculus
68 YAP1 10413
Affinity Capture-MS Homo sapiens
69 SRBD1  
Affinity Capture-MS Homo sapiens
70 TRIM21 6737
Affinity Capture-MS Homo sapiens
71 SLX4  
Affinity Capture-MS Homo sapiens
72 RPL31 6160
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
73 NOC4L 79050
Affinity Capture-MS Homo sapiens
74 NOB1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
75 RFC4 5984
Affinity Capture-MS Homo sapiens
76 HECTD1 25831
Affinity Capture-MS Homo sapiens
77 CUL2 8453
Affinity Capture-MS Homo sapiens
78 RRP1B 23076
Affinity Capture-MS Homo sapiens
79 MAGEB2 4113
Affinity Capture-MS Homo sapiens
80 SND1 27044
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
81 SEC61B 10952
Affinity Capture-MS Homo sapiens
82 SRPK1 6732
Affinity Capture-MS Homo sapiens
83 CCNT1  
Affinity Capture-MS Homo sapiens
84 DYNLT3 6990
Co-fractionation Homo sapiens
85 SSR4 6748
Affinity Capture-MS Homo sapiens
86 TXN2 25828
Co-fractionation Homo sapiens
87 CNBP 7555
Affinity Capture-MS Homo sapiens
88 ANLN 54443
Affinity Capture-MS Homo sapiens
89 EIF3G 8666
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
90 HSPA5 3309
Co-fractionation Homo sapiens
91 GTF3C3 9330
Affinity Capture-MS Homo sapiens
92 RBM39 9584
Affinity Capture-MS Homo sapiens
93 DNAJC21  
Affinity Capture-MS Homo sapiens
94 ABT1 29777
Affinity Capture-MS Homo sapiens
95 LRRC59 55379
Affinity Capture-MS Homo sapiens
96 SIRT7  
Affinity Capture-MS Homo sapiens
97 SRSF4 6429
Affinity Capture-MS Homo sapiens
98 ZNF622 90441
Affinity Capture-MS Homo sapiens
99 ACAD11 84129
Affinity Capture-MS Homo sapiens
100 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
101 EBNA1BP2 10969
Affinity Capture-MS Homo sapiens
102 LRRC47 57470
Affinity Capture-MS Homo sapiens
103 EIF4E 1977
Affinity Capture-MS Homo sapiens
104 EPRS 2058
Affinity Capture-MS Homo sapiens
105 EIF2S2 8894
Affinity Capture-MS Homo sapiens
106 WIBG 84305
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
107 NIP7 51388
Affinity Capture-MS Homo sapiens
108 FN1 2335
Affinity Capture-MS Homo sapiens
109 HIST1H1B 3009
Affinity Capture-MS Homo sapiens
110 PCBP1 5093
Affinity Capture-MS Homo sapiens
111 CMSS1  
Affinity Capture-MS Homo sapiens
112 RPA3 6119
Proximity Label-MS Homo sapiens
113 LTV1  
Affinity Capture-MS Homo sapiens
114 EIF2D 1939
Affinity Capture-MS Homo sapiens
115 RPL35A 6165
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
116 HIST1H1A 3024
Affinity Capture-MS Homo sapiens
117 PATZ1  
Affinity Capture-MS Homo sapiens
118 Rpl35 66489
Affinity Capture-MS Mus musculus
119 GNL3 26354
Affinity Capture-MS Homo sapiens
120 DDX55  
Affinity Capture-MS Homo sapiens
121 U2SURP 23350
Affinity Capture-MS Homo sapiens
122 YBX1 4904
Affinity Capture-MS Homo sapiens
123 EIF1AD 84285
Affinity Capture-MS Homo sapiens
124 RPS27A 6233
Co-fractionation Homo sapiens
125 PRDM10  
Affinity Capture-MS Homo sapiens
126 IARS 3376
Affinity Capture-MS Homo sapiens
127 RRS1 23212
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
128 USP1 7398
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
129 EIF3I 8668
Affinity Capture-MS Homo sapiens
130 ZEB1  
Affinity Capture-MS Homo sapiens
131 SRSF9 8683
Affinity Capture-MS Homo sapiens
132 EMC4 51234
Affinity Capture-MS Homo sapiens
133 DCTN2 10540
Affinity Capture-MS Homo sapiens
134 CAPZB 832
Affinity Capture-MS Homo sapiens
135 TBL3 10607
Affinity Capture-MS Homo sapiens
136 G3BP2 9908
Affinity Capture-MS Homo sapiens
137 H2AFB3  
Affinity Capture-MS Homo sapiens
138 TRA2B 6434
Affinity Capture-MS Homo sapiens
139 PDCD2 5134
Affinity Capture-MS Homo sapiens
140 KRR1 11103
Affinity Capture-MS Homo sapiens
141 LARP7 51574
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
142 NEIL1  
Affinity Capture-MS Homo sapiens
143 RPS24 6229
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
144 NCL 4691
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
145 ALYREF 10189
Affinity Capture-MS Homo sapiens
146 EIF4B 1975
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
147 ATG4B 23192
Affinity Capture-MS Homo sapiens
148 PRPF4 9128
Affinity Capture-MS Homo sapiens
149 RPL23A 6147
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
150 CRNKL1 51340
Affinity Capture-MS Homo sapiens
151 ASB14  
Affinity Capture-MS Homo sapiens
152 SEC61A1 29927
Affinity Capture-MS Homo sapiens
153 LLPH  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
154 CKMT2  
Affinity Capture-MS Homo sapiens
155 EXOSC7 23016
Affinity Capture-MS Homo sapiens
156 SPRTN  
Affinity Capture-MS Homo sapiens
157 WDR3  
Affinity Capture-MS Homo sapiens
158 EIF2S3 1968
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
159 EIF3K 27335
Affinity Capture-MS Homo sapiens
160 RPS17 6218
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
161 NAA40  
Affinity Capture-MS Homo sapiens
162 TARDBP 23435
Affinity Capture-MS Homo sapiens
163 FMR1 2332
Affinity Capture-MS Homo sapiens
164 BTF3 689
Affinity Capture-MS Homo sapiens
165 NOP56 10528
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
166 SRPR 6734
Affinity Capture-MS Homo sapiens
167 ZFR 51663
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
168 RPL14 9045
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
169 EIF4A1 1973
Affinity Capture-MS Homo sapiens
170 CAND1 55832
Affinity Capture-MS Homo sapiens
171 RSBN1  
Affinity Capture-MS Homo sapiens
172 MPHOSPH10 10199
Affinity Capture-MS Homo sapiens
173 RPS3 6188
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
174 RPS18 6222
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
175 ASCC3 10973
Affinity Capture-MS Homo sapiens
176 B3GNT2 10678
Affinity Capture-MS Homo sapiens
177 EXOSC2 23404
Affinity Capture-MS Homo sapiens
178 HSP90AA1 3320
Co-fractionation Homo sapiens
179 H1FX 8971
Affinity Capture-MS Homo sapiens
180 RRP12 23223
Affinity Capture-MS Homo sapiens
181 PRC1 9055
Affinity Capture-MS Homo sapiens
182 NPM1 4869
Affinity Capture-MS Homo sapiens
183 FGF17  
Affinity Capture-MS Homo sapiens
184 KRI1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
185 HELZ2  
Affinity Capture-MS Homo sapiens
186 TBC1D15 64786
Affinity Capture-MS Homo sapiens
187 VCAM1 7412
Affinity Capture-MS Homo sapiens
188 E4F1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
189 Eif3a 13669
Affinity Capture-MS Mus musculus
190 CUL1 8454
Affinity Capture-MS Homo sapiens
191 RBM42  
Affinity Capture-MS Homo sapiens
192 ATP5I 521
Co-fractionation Homo sapiens
193 RPL10L 140801
Co-fractionation Homo sapiens
194 ZCRB1  
Affinity Capture-MS Homo sapiens
195 ATXN2 6311
Affinity Capture-MS Homo sapiens
196 POP1 10940
Affinity Capture-MS Homo sapiens
197 ACTA2 59
Co-fractionation Homo sapiens
198 PHF10  
Affinity Capture-MS Homo sapiens
199 HNRNPA0 10949
Affinity Capture-MS Homo sapiens
200 DDX21 9188
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
201 NFRKB  
Affinity Capture-MS Homo sapiens
202 CDKN1A  
Affinity Capture-MS Homo sapiens
203 RPL4 6124
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
204 WHSC1 7468
Affinity Capture-MS Homo sapiens
205 DRG1 4733
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
206 EIF2B5 8893
Affinity Capture-MS Homo sapiens
207 PPT2  
Co-fractionation Homo sapiens
208 EIF2A 83939
Co-fractionation Homo sapiens
209 VRK1 7443
Affinity Capture-MS Homo sapiens
210 DDX10  
Affinity Capture-MS Homo sapiens
211 CDK13 8621
Affinity Capture-MS Homo sapiens
212 NKRF 55922
Affinity Capture-MS Homo sapiens
213 EXOSC5 56915
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
214 CTNNB1 1499
Affinity Capture-MS Homo sapiens
215 NOMO3 408050
Affinity Capture-MS Homo sapiens
216 LYAR 55646
Affinity Capture-MS Homo sapiens
217 RPLP0 6175
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
218 RPLP0P6 220717
Co-fractionation Homo sapiens
219 DDX27 55661
Affinity Capture-MS Homo sapiens
220 Ksr1  
Affinity Capture-MS Mus musculus
221 RAD21 5885
Affinity Capture-Western Homo sapiens
222 LOC101929876 101929876
Co-fractionation Homo sapiens
223 GPATCH11  
Affinity Capture-MS Homo sapiens
224 RSL1D1 26156
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
225 RPL32 6161
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
226 SGPL1 8879
Affinity Capture-MS Homo sapiens
227 DHX36 170506
Affinity Capture-MS Homo sapiens
228 EMC8 10328
Affinity Capture-MS Homo sapiens
229 XPO1 7514
Affinity Capture-MS Homo sapiens
230 RC3H2  
Affinity Capture-MS Homo sapiens
231 ZBTB24  
Affinity Capture-MS Homo sapiens
232 SRSF5 6430
Affinity Capture-MS Homo sapiens
233 EGFR 1956
Negative Genetic Homo sapiens
234 HSP90AA5P 730211
Co-fractionation Homo sapiens
235 LARS 51520
Affinity Capture-MS Homo sapiens
236 RPS27 6232
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
237 CDK2 1017
Affinity Capture-MS Homo sapiens
238 CEP250 11190
Affinity Capture-MS Homo sapiens
239 MYC  
Affinity Capture-MS Homo sapiens
240 ZCCHC6 79670
Affinity Capture-MS Homo sapiens
241 NOL12 79159
Affinity Capture-MS Homo sapiens
242 CSNK2A2 1459
Affinity Capture-MS Homo sapiens
243 FOCAD 54914
Affinity Capture-MS Homo sapiens
244 PPAN 56342
Affinity Capture-MS Homo sapiens
245 DDRGK1 65992
Affinity Capture-MS Homo sapiens
246 EDF1 8721
Affinity Capture-MS Homo sapiens
247 H2AFB2  
Affinity Capture-MS Homo sapiens
248 NOG 9241
Affinity Capture-MS Homo sapiens
249 CCDC140  
Affinity Capture-MS Homo sapiens
250 RPL26 6154
Co-fractionation Homo sapiens
251 FTSJ3 117246
Affinity Capture-MS Homo sapiens
252 LARP4 113251
Affinity Capture-MS Homo sapiens
253 HUWE1 10075
Affinity Capture-MS Homo sapiens
254 EIF3H 8667
Affinity Capture-MS Homo sapiens
255 EEF1A1 1915
Co-fractionation Homo sapiens
256 PA2G4 5036
Affinity Capture-MS Homo sapiens
257 RPL13 6137
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
258 SURF6  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
259 SPOP  
Affinity Capture-MS Homo sapiens
260 PRRC2A 7916
Affinity Capture-MS Homo sapiens
261 TOE1 114034
Affinity Capture-MS Homo sapiens
262 ILF3 3609
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
263 TP53 7157
Affinity Capture-MS Homo sapiens
264 UBA5 79876
Affinity Capture-MS Homo sapiens
265 FOLR1 2348
Affinity Capture-MS Homo sapiens
266 FXR1 8087
Affinity Capture-MS Homo sapiens
267 SRP19 6728
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
268 KNOP1 400506
Affinity Capture-MS Homo sapiens
269 RPS4X 6191
Reconstituted Complex Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
270 RPS10P5 93144
Co-fractionation Homo sapiens
271 THAP11 57215
Affinity Capture-MS Homo sapiens
272 TSPYL1 7259
Affinity Capture-MS Homo sapiens
273 RPS5 6193
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
274 NIFK 84365
Affinity Capture-MS Homo sapiens
275 RPS26 6231
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
276 RIOK2 55781
Affinity Capture-MS Homo sapiens
277 EIF3J 8669
Affinity Capture-MS Homo sapiens
278 EIF3M 10480
Affinity Capture-MS Homo sapiens
279 TEFM  
Affinity Capture-MS Homo sapiens
280 YBX3 8531
Affinity Capture-MS Homo sapiens
281 RPL7A 6130
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
282 ARF1 375
Proximity Label-MS Homo sapiens
283 EIF2AK2 5610
Affinity Capture-MS Homo sapiens
284 GLYR1 84656
Affinity Capture-MS Homo sapiens
285 KRAS 3845
Negative Genetic Homo sapiens
286 CASC3  
Affinity Capture-MS Homo sapiens
287 CKAP4 10970
Affinity Capture-MS Homo sapiens
288 PRKRIR  
Affinity Capture-MS Homo sapiens
289 NOP14 8602
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
290 RPSA 3921
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
291 RPL26L1 51121
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
292 UTP14A 10813
Affinity Capture-MS Homo sapiens
293 EEF1G 1937
Affinity Capture-MS Homo sapiens
294 CNOT2  
Affinity Capture-MS Homo sapiens
295 SDAD1  
Affinity Capture-MS Homo sapiens
296 RPS19 6223
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
297 BYSL 705
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-crystal Structure Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
298 UQCRB 7381
Co-fractionation Homo sapiens
299 SSB 6741
Affinity Capture-MS Homo sapiens
300 HNRNPR 10236
Affinity Capture-MS Homo sapiens
301 Ktn1  
Affinity Capture-MS Mus musculus
302 FAU 2197
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
303 ATG13 9776
Affinity Capture-MS Homo sapiens
304 DIMT1 27292
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
305 RPL10A 4736
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
306 UFM1 51569
Affinity Capture-MS Homo sapiens
307 PRKCDBP 112464
Co-fractionation Homo sapiens
308 MCM2 4171
Affinity Capture-MS Homo sapiens
309 FAM98A 25940
Affinity Capture-MS Homo sapiens
310 CCDC137  
Affinity Capture-MS Homo sapiens
311 NMD3 51068
Affinity Capture-MS Homo sapiens
312 EIF3B 8662
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
313 LSG1  
Affinity Capture-MS Homo sapiens
314 GTF3C5 9328
Affinity Capture-MS Homo sapiens
315 MARS 4141
Affinity Capture-MS Homo sapiens
316 ITGA4 3676
Affinity Capture-MS Homo sapiens
317 CCDC47 57003
Affinity Capture-MS Homo sapiens
318 RPL29 6159
Co-fractionation Homo sapiens
319 MTDH 92140
Affinity Capture-MS Homo sapiens
320 TFCP2 7024
Affinity Capture-MS Homo sapiens
321 CYLD  
Affinity Capture-MS Homo sapiens
322 PABPC4 8761
Affinity Capture-MS Homo sapiens
323 RBM8A 9939
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
324 RBM19 9904
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
325 FOXP1 27086
Protein-RNA Homo sapiens
326 BRIX1 55299
Affinity Capture-MS Homo sapiens
327 RPS4Y2 140032
Affinity Capture-MS Homo sapiens
328 RPL27 6155
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
329 TTC37 9652
Affinity Capture-MS Homo sapiens
330 NSUN2 54888
Affinity Capture-MS Homo sapiens
331 PNO1 56902
Affinity Capture-MS Homo sapiens
332 ZCCHC9  
Affinity Capture-MS Homo sapiens
333 RPL9 6133
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
334 ADAR 103
Affinity Capture-MS Homo sapiens
335 PINX1  
Affinity Capture-MS Homo sapiens
336 CUL4B 8450
Affinity Capture-MS Homo sapiens
337 PARK2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
338 IGF1R 3480
Affinity Capture-MS Homo sapiens
339 RPS10 6204
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
340 BTF3L4 91408
Affinity Capture-MS Homo sapiens
341 XRN1 54464
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
342 BLM 641
Affinity Capture-MS Homo sapiens
343 TUBGCP4 27229
Affinity Capture-MS Homo sapiens
344 NOP2 4839
Affinity Capture-MS Homo sapiens
345 RPL5 6125
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
346 ABCF2 10061
Affinity Capture-MS Homo sapiens
347 BZW2 28969
Affinity Capture-MS Homo sapiens
348 CHMP4B 128866
Affinity Capture-MS Homo sapiens
349 LAS1L 81887
Affinity Capture-MS Homo sapiens
350 HIST1H1E 3008
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
351 RPL36 25873
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
352 RPA4  
Proximity Label-MS Homo sapiens
353 RPLP1 6176
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
354 DHX9 1660
Affinity Capture-MS Homo sapiens
355 ENY2 56943
Affinity Capture-MS Homo sapiens
356 SEC61G 23480
Affinity Capture-MS Homo sapiens
357 HNRNPA3 220988
Affinity Capture-MS Homo sapiens
358 MTHFD1L 25902
Affinity Capture-MS Homo sapiens
359 HMGB2 3148
Affinity Capture-MS Homo sapiens
360 RPL11 6135
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
361 LARP1 23367
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
362 CKAP5 9793
Affinity Capture-MS Homo sapiens
363 FGF8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
364 SPATS2L 26010
Affinity Capture-MS Homo sapiens
365 METTL14  
Affinity Capture-MS Homo sapiens
366 CHERP 10523
Affinity Capture-MS Homo sapiens
367 ECT2 1894
Affinity Capture-MS Homo sapiens
368 EXOSC10 5394
Affinity Capture-MS Homo sapiens
369 EEF2 1938
Co-fractionation Homo sapiens
370 USP16  
Affinity Capture-MS Homo sapiens
371 HSP90AB1 3326
Co-fractionation Homo sapiens
372 DCAF13 25879
Affinity Capture-MS Homo sapiens
373 RPL21 6144
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
374 ZC3H8  
Affinity Capture-MS Homo sapiens
375 RIOK3 8780
Affinity Capture-MS Homo sapiens
376 FAM195B 348262
Affinity Capture-MS Homo sapiens
377 HNRNPUL1 11100
Affinity Capture-MS Homo sapiens
378 PDCD11 22984
Affinity Capture-MS Homo sapiens
379 RFC1 5981
Affinity Capture-MS Homo sapiens
380 PDCD4 27250
Affinity Capture-MS Homo sapiens
381 PRR3  
Affinity Capture-MS Homo sapiens
382 NCAPH 23397
Affinity Capture-MS Homo sapiens
383 PSPC1 55269
Affinity Capture-MS Homo sapiens
384 FXR2 9513
Affinity Capture-MS Homo sapiens
385 RPS13 6207
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
386 RPS14 6208
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
387 RPL12 6136
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
388 RPL22 6146
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
389 HP1BP3 50809
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
390 SPAST 6683
Affinity Capture-MS Homo sapiens
391 HDLBP 3069
Affinity Capture-MS Homo sapiens
392 RPL18 6141
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
393 RRBP1 6238
Affinity Capture-MS Homo sapiens
394 KTN1 3895
Affinity Capture-MS Homo sapiens
395 Eif3e 16341
Affinity Capture-MS Mus musculus
396 NEUROG3  
Affinity Capture-MS Homo sapiens
397 C3orf17  
Affinity Capture-MS Homo sapiens
398 ZNF574  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
399 PIP5K1A 8394
Affinity Capture-MS Homo sapiens
400 AHSA1 10598
Affinity Capture-MS Homo sapiens
401 EIF2S1 1965
Affinity Capture-MS Homo sapiens
402 DDX50 79009
Affinity Capture-MS Homo sapiens
403 POP7  
Affinity Capture-MS Homo sapiens
404 TOP2B 7155
Affinity Capture-MS Homo sapiens
405 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
406 RPL3L 6123
Co-fractionation Homo sapiens
407 RPS25 6230
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
408 AVEN 57099
Affinity Capture-MS Homo sapiens
409 RPL6 6128
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
410 PRDM15  
Affinity Capture-MS Homo sapiens
411 RPS21 6227
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
412 HOXD13  
Affinity Capture-MS Homo sapiens
413 DDX3X 1654
Affinity Capture-MS Homo sapiens
414 PRRC2C 23215
Affinity Capture-MS Homo sapiens
415 SON 6651
Affinity Capture-MS Homo sapiens
416 HNRNPM 4670
Co-fractionation Homo sapiens
417 PBRM1 55193
Affinity Capture-MS Homo sapiens
418 MTHFD1 4522
Affinity Capture-MS Homo sapiens
419 DDX58 23586
Affinity Capture-RNA Homo sapiens
420 PRRC2B  
Affinity Capture-MS Homo sapiens
421 MYBBP1A 10514
Affinity Capture-MS Homo sapiens
422 RPL34 6164
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
423 PDZD8 118987
Affinity Capture-MS Homo sapiens
424 UFL1 23376
Affinity Capture-MS Homo sapiens
425 RPL38 6169
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
426 API5 8539
Affinity Capture-MS Homo sapiens
427 GTPBP4 23560
Affinity Capture-MS Homo sapiens
428 RNMTL1  
Affinity Capture-MS Homo sapiens
429 RTCB 51493
Affinity Capture-MS Homo sapiens
430 GLI4  
Affinity Capture-MS Homo sapiens
431 RPS7 6201
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
432 RPL8 6132
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
433 C14orf166 51637
Affinity Capture-MS Homo sapiens
434 RPL28 6158
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
435 RPS27L 51065
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
436 SERBP1 26135
Affinity Capture-MS Homo sapiens
437 AR 367
Affinity Capture-MS Homo sapiens
438 RPL36AL 6166
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
439 RC3H1 149041
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
440 ATXN3 4287
Affinity Capture-MS Homo sapiens
441 NEMF 9147
Affinity Capture-MS Homo sapiens
442 DDX56  
Affinity Capture-MS Homo sapiens
443 HIST1H2AE 3012
Affinity Capture-MS Homo sapiens
444 EIF5 1983
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
445 EIF3L 51386
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
446 GNL2 29889
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
447 UBE2H 7328
Affinity Capture-MS Homo sapiens
448 RPS12 6206
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
449 RIT1 6016
Negative Genetic Homo sapiens
450 IGF2BP1 10642
Affinity Capture-MS Homo sapiens
451 RSBN1L  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
452 QARS 5859
Affinity Capture-MS Homo sapiens
453 RPS3A 6189
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
454 VAPA 9218
Co-fractionation Homo sapiens
455 WWP1 11059
Affinity Capture-MS Homo sapiens
456 RPL30 6156
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
457 YTHDF1 54915
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
458 NOP9 161424
Affinity Capture-MS Homo sapiens
459 HIST1H1D 3007
Affinity Capture-MS Homo sapiens
460 RPL13A 23521
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
461 RPL37A 6168
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
462 RPL10 6134
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
463 RPL15 6138
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
464 KARS 3735
Affinity Capture-MS Homo sapiens
465 PRPF3  
Affinity Capture-MS Homo sapiens
466 SRFBP1  
Affinity Capture-MS Homo sapiens
467 DHX57 90957
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
468 ELAVL1 1994
Affinity Capture-MS Homo sapiens
469 ZBTB1  
Affinity Capture-MS Homo sapiens
470 APP 351
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
471 SF3B2 10992
Affinity Capture-MS Homo sapiens
472 ILF2 3608
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
473 CAPRIN1 4076
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
474 USP36  
Affinity Capture-MS Homo sapiens
475 KIAA1429 25962
Affinity Capture-MS Homo sapiens
476 LARP4B 23185
Affinity Capture-MS Homo sapiens
477 SRP54 6729
Affinity Capture-MS Homo sapiens
478 TOP2A 7153
Affinity Capture-MS Homo sapiens
479 RPS20 6224
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
480 COPS5 10987
Affinity Capture-MS Homo sapiens
481 FBXW7  
Affinity Capture-MS Homo sapiens
482 RPL24 6152
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
483 PSMD9 5715
Affinity Capture-MS Homo sapiens
484 RPS8 6202
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
485 ABCE1 6059
Affinity Capture-MS Homo sapiens
486 STAU2 27067
Affinity Capture-MS Homo sapiens
487 EED  
Affinity Capture-MS Homo sapiens
488 SRP68 6730
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
489 HBS1L 10767
Affinity Capture-MS Homo sapiens
490 CEP57  
Affinity Capture-MS Homo sapiens
491 ATP6V0D1 9114
Co-fractionation Homo sapiens
492 Eif3i 54709
Affinity Capture-MS Mus musculus
493 MYCN  
Affinity Capture-MS Homo sapiens
494 SSR3 6747
Affinity Capture-MS Homo sapiens
495 CHD3 1107
Affinity Capture-MS Homo sapiens
496 ADSS 159
Affinity Capture-MS Homo sapiens
497 ERI1  
Affinity Capture-MS Homo sapiens
498 CTCF  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
499 ESR1  
Affinity Capture-MS Homo sapiens
500 LSM12 124801
Affinity Capture-MS Homo sapiens
501 EIF1B  
Affinity Capture-MS Homo sapiens
502 TBC1D17 79735
Affinity Capture-MS Homo sapiens
503 E2F4  
Affinity Capture-MS Homo sapiens
504 RPS23 6228
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
505 FARS2 10667
Affinity Capture-MS Homo sapiens
506 GEMIN5 25929
Affinity Capture-MS Homo sapiens
507 SRP9 6726
Affinity Capture-MS Homo sapiens
508 ZKSCAN8  
Affinity Capture-MS Homo sapiens
509 RPL39 6170
Affinity Capture-MS Homo sapiens
510 ASCC1 51008
Affinity Capture-MS Homo sapiens
511 STAU1 6780
Affinity Capture-MS Homo sapiens
512 SRSF6 6431
Affinity Capture-MS Homo sapiens
513 ZNF22  
Affinity Capture-MS Homo sapiens
514 ANKHD1 54882
Affinity Capture-MS Homo sapiens
515 DDX5 1655
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
516 RPL27A 6157
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
517 DDX1 1653
Affinity Capture-MS Homo sapiens
518 CEP76  
Affinity Capture-MS Homo sapiens
519 UPF1 5976
Affinity Capture-MS Homo sapiens
520 ZC3H15 55854
Affinity Capture-MS Homo sapiens
521 RPS15A 6210
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
522 FGF13  
Affinity Capture-MS Homo sapiens
523 DAXX  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
524 USP10 9100
Affinity Capture-MS Homo sapiens
525 RPF1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
526 SFPQ 6421
Affinity Capture-MS Homo sapiens
527 DDX6 1656
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
528 BMS1  
Affinity Capture-MS Homo sapiens
529 RPLP2 6181
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
530 FANCD2  
Affinity Capture-MS Homo sapiens
531 RPL23 9349
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
532 ASB15 142685
Affinity Capture-MS Homo sapiens
533 EIF4G1 1981
Affinity Capture-MS Homo sapiens
534 CCDC124 115098
Affinity Capture-MS Homo sapiens
535 RPL35 11224
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
536 TSPYL2  
Affinity Capture-MS Homo sapiens
537 RLIM 51132
Affinity Capture-MS Homo sapiens
538 DHX29 54505
Affinity Capture-MS Homo sapiens
539 RFC2 5982
Affinity Capture-MS Homo sapiens
540 Rrbp1  
Affinity Capture-MS Mus musculus
541 RPL3 6122
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
542 RPP30 10556
Affinity Capture-MS Homo sapiens
543 BBX 56987
Affinity Capture-MS Homo sapiens
544 RPL7 6129
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
545 SUZ12  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
546 AURKB 9212
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
547 MAP7D1 55700
Affinity Capture-MS Homo sapiens
548 DKC1 1736
Affinity Capture-MS Homo sapiens
549 DHX30 22907
Affinity Capture-MS Homo sapiens
550 INO80B 83444
Affinity Capture-MS Homo sapiens
551 ASPH 444
Affinity Capture-MS Homo sapiens
552 ZNF724P  
Affinity Capture-MS Homo sapiens
553 DHX37  
Affinity Capture-MS Homo sapiens
554 RPS29 6235
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
555 EIF4A2 1974
Affinity Capture-MS Homo sapiens
556 RARS 5917
Affinity Capture-MS Homo sapiens
557 GNB2L1 10399
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Affinity Capture-MS Homo sapiens
558 EIF3D 8664
Affinity Capture-MS Homo sapiens
559 TRIM71  
Affinity Capture-MS Homo sapiens
560 H2AFX 3014
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
561 GTF3C4 9329
Affinity Capture-MS Homo sapiens
562 YTHDC2 64848
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
563 ZNF689  
Affinity Capture-MS Homo sapiens
564 WDR4 10785
Affinity Capture-MS Homo sapiens
565 CCDC86  
Affinity Capture-MS Homo sapiens
566 TUBG1 7283
Affinity Capture-MS Homo sapiens
567 MINA 84864
Affinity Capture-MS Homo sapiens
568 ZNF746  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
569 NUFIP2 57532
Affinity Capture-MS Homo sapiens
570 CUL5 8065
Affinity Capture-MS Homo sapiens
571 SMURF1 57154
Affinity Capture-MS Homo sapiens
572 RPS15 6209
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
573 SRP72 6731
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
574 NSA2  
Affinity Capture-MS Homo sapiens
575 STRBP 55342
Affinity Capture-MS Homo sapiens
576 EIF4A3 9775
Affinity Capture-MS Homo sapiens
577 RPS28 6234
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
578 TERF1 7013
Affinity Capture-MS Homo sapiens
579 TRIP4 9325
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
580 TRIM31  
Affinity Capture-MS Homo sapiens
581 PINK1  
Affinity Capture-MS Homo sapiens
582 RPS6 6194
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
583 ZNF629 23361
Affinity Capture-MS Homo sapiens
584 APOBEC3F 200316
Affinity Capture-MS Homo sapiens
585 HNRNPU 3192
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
586 C9orf72  
Affinity Capture-MS Homo sapiens
587 EXOSC1 51013
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
588 ESYT1 23344
Affinity Capture-MS Homo sapiens
589 NEDD8 4738
Affinity Capture-MS Homo sapiens
590 CDC5L 988
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
591 PARN  
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which RPS16 is involved
PathwayEvidenceSource
Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S TAS Reactome
Axon guidance IEA Reactome
Cap-dependent Translation Initiation TAS Reactome
Cellular response to starvation IEA Reactome
Cellular responses to stimuli IEA Reactome
Cellular responses to stress IEA Reactome
Developmental Biology IEA Reactome
Disease TAS Reactome
Eukaryotic Translation Elongation IEA Reactome
Eukaryotic Translation Initiation TAS Reactome
Eukaryotic Translation Termination IEA Reactome
Formation of a pool of free 40S subunits TAS Reactome
Formation of the ternary complex, and subsequently, the 43S complex TAS Reactome
GTP hydrolysis and joining of the 60S ribosomal subunit TAS Reactome
Infectious disease TAS Reactome
Influenza Infection TAS Reactome
Influenza Viral RNA Transcription and Replication TAS Reactome
L13a-mediated translational silencing of Ceruloplasmin expression TAS Reactome
Major pathway of rRNA processing in the nucleolus and cytosol TAS Reactome
Metabolism IEA Reactome
Metabolism of amino acids and derivatives IEA Reactome
Metabolism of proteins TAS Reactome
Metabolism of proteins IEA Reactome
Metabolism of RNA TAS Reactome
Nervous system development IEA Reactome
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) TAS Reactome
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) TAS Reactome
Nonsense-Mediated Decay (NMD) TAS Reactome
Peptide chain elongation IEA Reactome
Regulation of expression of SLITs and ROBOs IEA Reactome
Response of EIF2AK4 (GCN2) to amino acid deficiency IEA Reactome
Ribosomal scanning and start codon recognition TAS Reactome
rRNA processing TAS Reactome
rRNA processing in the nucleus and cytosol TAS Reactome
SARS-CoV Infections TAS Reactome
SARS-CoV-1 Infection TAS Reactome
SARS-CoV-1 modulates host translation machinery TAS Reactome
SARS-CoV-1-host interactions TAS Reactome
SARS-CoV-2 Infection TAS Reactome
SARS-CoV-2 modulates host translation machinery TAS Reactome
SARS-CoV-2-host interactions TAS Reactome
Selenoamino acid metabolism IEA Reactome
Selenocysteine synthesis IEA Reactome
Signaling by ROBO receptors IEA Reactome
SRP-dependent cotranslational protein targeting to membrane IEA Reactome
SRP-dependent cotranslational protein targeting to membrane TAS Reactome
Translation TAS Reactome
Translation IEA Reactome
Translation initiation complex formation TAS Reactome
Viral Infection Pathways TAS Reactome
Viral mRNA Translation TAS Reactome





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