Gene description for RPS24
Gene name ribosomal protein S24
Gene symbol RPS24
Other names/aliases DBA3
S24
Species Homo sapiens
 Database cross references - RPS24
ExoCarta ExoCarta_6229
Vesiclepedia VP_6229
Entrez Gene 6229
HGNC 10411
MIM 602412
UniProt P62847  
 RPS24 identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Chondrocytes 35931686    
Chondrocytes 35931686    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Foreskin fibroblasts 34108659    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Lymphoma cells 34108659    
Mammary cancer-associated fibroblasts 34108659    
Melanoma cells 25950383    
Melanoma cells 25950383    
Mesenchymal stem cells Unpublished / Not applicable
Mesenchymal stem cells 36408942    
Monocytic leukemia cells 34108659    
Neuroblastoma cells 25944692    
Normal mammary epithelial cells 34108659    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pluripotent stem cells 34108659    
Retinal pigment epithelial cells 35333565    
Retinal pigment epithelial cells 35333565    
Squamous carcinoma cells 20124223    
T lymphocytes 34108659    
Thymus 23844026    
 Gene ontology annotations for RPS24
Molecular Function
    RNA binding GO:0003723 HDA
    structural constituent of ribosome GO:0003735 HDA
    structural constituent of ribosome GO:0003735 IDA
    structural constituent of ribosome GO:0003735 IMP
    structural constituent of ribosome GO:0003735 NAS
    translation initiation factor binding GO:0031369 ISS
Biological Process
    cytoplasmic translation GO:0002181 IC
    cytoplasmic translation GO:0002181 NAS
    rRNA processing GO:0006364 IMP
    translation GO:0006412 IC
    erythrocyte homeostasis GO:0034101 IMP
    ribosomal small subunit biogenesis GO:0042274 IDA
    ribosomal small subunit biogenesis GO:0042274 IMP
Subcellular Localization
    nucleus GO:0005634 HDA
    nucleoplasm GO:0005654 TAS
    nucleolus GO:0005730 IEA
    cytoplasm GO:0005737 NAS
    endoplasmic reticulum GO:0005783 IDA
    cytosol GO:0005829 IDA
    cytosol GO:0005829 TAS
    small ribosomal subunit GO:0015935 HDA
    membrane GO:0016020 HDA
    cytosolic ribosome GO:0022626 IDA
    cytosolic small ribosomal subunit GO:0022627 HDA
    cytosolic small ribosomal subunit GO:0022627 IDA
    cytosolic small ribosomal subunit GO:0022627 NAS
    small-subunit processome GO:0032040 IDA
 Experiment description of studies that identified RPS24 in exosomes
1
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 412
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MCF7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
6
Experiment ID 414
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
7
Experiment ID 426
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
8
Experiment ID 427
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
9
Experiment ID 497
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
10
Experiment ID 498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
11
Experiment ID 207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DKO-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
12
Experiment ID 208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name Dks-8
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
13
Experiment ID 209
MISEV standards
✘ Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DLD-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
14
Experiment ID 282
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘ Negative markers
✔
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Ultracentrifugation - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
15
Experiment ID 283
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘ Negative markers
✔
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Ultracentrifugation - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
16
Experiment ID 407
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
17
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
18
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
19
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
20
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
21
Experiment ID 405
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Foreskin fibroblasts
Sample name BJ
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
22
Experiment ID 363
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
23
Experiment ID 364
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
24
Experiment ID 365
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
25
Experiment ID 234
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-C3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
26
Experiment ID 235
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
27
Experiment ID 236
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name MHCC97L
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
28
Experiment ID 417
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Lymphoma cells
Sample name Raji
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
29
Experiment ID 411
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Mammary cancer-associated fibroblasts
Sample name mCAF
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
30
Experiment ID 255
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name G1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
31
Experiment ID 256
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 501mel
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
32
Experiment ID 126
MISEV standards
✘ Biophysical techniques
✔
GAPDH
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry [LTQ-FT Ultra]
PubMed ID Unpublished / Not applicable
Organism Homo sapiens
Experiment description Mesenchymal Stem Cell Exosomes: The Future MSC-based Therapy?
Authors "Ruenn Chai Lai, Ronne Wee Yeh Yeo, Soon Sim Tan, Bin Zhang, Yijun Yin, Newman Siu Kwan Sze, Andre Choo, and Sai Kiang Lim"
Journal name Mesenchymal Stem Cell Therapy
Publication year 2011
Sample Mesenchymal stem cells
Sample name huES9.E1
Isolation/purification methods HPLC
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Antobody array
Mass spectrometry
33
Experiment ID 488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
34
Experiment ID 418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
35
Experiment ID 224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25944692    
Organism Homo sapiens
Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name Oncotarget
Publication year 2015
Sample Neuroblastoma cells
Sample name SH-SY5Y
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
36
Experiment ID 413
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Normal mammary epithelial cells
Sample name MCF10A
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
37
Experiment ID 211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
38
Experiment ID 212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
39
Experiment ID 406
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name BxPC3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
40
Experiment ID 415
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
41
Experiment ID 434
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
42
Experiment ID 435
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
43
Experiment ID 408
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPDE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
44
Experiment ID 409
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPNE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
45
Experiment ID 416
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pluripotent stem cells
Sample name PSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
46
Experiment ID 834
MISEV standards
✔
EM
Biophysical techniques
✔
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35333565    
Organism Homo sapiens
Experiment description LAMP2A regulates the loading of proteins into exosomes
Authors "Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name Sci Adv
Publication year 2022
Sample Retinal pigment epithelial cells
Sample name ARPE-19
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
47
Experiment ID 835
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35333565    
Organism Homo sapiens
Experiment description LAMP2A regulates the loading of proteins into exosomes
Authors "Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name Sci Adv
Publication year 2022
Sample Retinal pigment epithelial cells
Sample name ARPE-19
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
48
Experiment ID 191
MISEV standards
✘ Biophysical techniques
✔
Alix|CD81|CD9
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20124223    
Organism Homo sapiens
Experiment description Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors "Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK."
Journal name Mol Cell Proteomics
Publication year 2010
Sample Squamous carcinoma cells
Sample name Squamous carcinoma cell (A431)
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
49
Experiment ID 410
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample T lymphocytes
Sample name Jurkat
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
50
Experiment ID 217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RPS24
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 RPSAP58 388524
Affinity Capture-MS Homo sapiens
2 PAH 5053
Two-hybrid Homo sapiens
3 UBL4A 8266
Affinity Capture-MS Homo sapiens
4 AATF  
Proximity Label-MS Homo sapiens
5 ZNF346  
Affinity Capture-MS Homo sapiens
6 EIF3C 8663
Co-fractionation Homo sapiens
7 TOP2B 7155
Proximity Label-MS Homo sapiens
8 NOP14 8602
Proximity Label-MS Homo sapiens
9 ACTC1 70
Affinity Capture-MS Homo sapiens
10 GTF2F1 2962
Proximity Label-MS Homo sapiens
11 KIF20A 10112
Affinity Capture-MS Homo sapiens
12 CSNK2A1 1457
Affinity Capture-MS Homo sapiens
13 NHP2L1 4809
Co-fractionation Homo sapiens
14 FAM32A  
Proximity Label-MS Homo sapiens
15 WDR26 80232
Co-fractionation Homo sapiens
16 UTP3 57050
Proximity Label-MS Homo sapiens
17 RPL26L1 51121
Affinity Capture-MS Homo sapiens
18 MRPS18C  
Affinity Capture-MS Homo sapiens
19 NOL8  
Proximity Label-MS Homo sapiens
20 GPATCH4 54865
Proximity Label-MS Homo sapiens
21 EIF3CL 728689
Co-fractionation Homo sapiens
22 DHX33  
Proximity Label-MS Homo sapiens
23 KIF23 9493
Affinity Capture-MS Homo sapiens
24 METAP2 10988
Affinity Capture-MS Homo sapiens
25 RCBTB2  
Affinity Capture-MS Homo sapiens
26 FBL 2091
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
27 ATAD5  
Proximity Label-MS Homo sapiens
28 RPS9 6203
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
29 GSPT1 2935
Affinity Capture-MS Homo sapiens
30 FAM207A  
Co-crystal Structure Homo sapiens
Proximity Label-MS Homo sapiens
31 HERC2 8924
Affinity Capture-MS Homo sapiens
32 ZNF598 90850
Proximity Label-MS Homo sapiens
33 ARIH2 10425
Affinity Capture-MS Homo sapiens
34 BUD31 8896
Proximity Label-MS Homo sapiens
35 RPS11 6205
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
36 RPL19 6143
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
37 KIF14 9928
Affinity Capture-MS Homo sapiens
38 EMC9  
Affinity Capture-MS Homo sapiens
39 CHMP4C 92421
Affinity Capture-MS Homo sapiens
40 UTP14A 10813
Proximity Label-MS Homo sapiens
41 HIST1H2AG 8969
Cross-Linking-MS (XL-MS) Homo sapiens
42 TUFM 7284
Co-fractionation Homo sapiens
43 RPL18A 6142
Co-fractionation Homo sapiens
44 Srp72  
Affinity Capture-MS Mus musculus
45 YAP1 10413
Affinity Capture-MS Homo sapiens
46 TRIM21 6737
Affinity Capture-MS Homo sapiens
47 OGT 8473
Reconstituted Complex Homo sapiens
48 RPL31 6160
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
49 DDX10  
Proximity Label-MS Homo sapiens
50 WDR43 23160
Proximity Label-MS Homo sapiens
51 SDAD1  
Proximity Label-MS Homo sapiens
52 CUL2 8453
Affinity Capture-MS Homo sapiens
53 RRP1B 23076
Proximity Label-MS Homo sapiens
54 MAGEB2 4113
Affinity Capture-MS Homo sapiens
55 PRPF31 26121
Proximity Label-MS Homo sapiens
56 SND1 27044
Proximity Label-MS Homo sapiens
57 GTPBP4 23560
Proximity Label-MS Homo sapiens
58 SLC25A5 292
Co-fractionation Homo sapiens
59 ANLN 54443
Affinity Capture-MS Homo sapiens
60 HIST1H2AD 3013
Co-fractionation Homo sapiens
61 RBM39 9584
Affinity Capture-MS Homo sapiens
62 NOC3L 64318
Proximity Label-MS Homo sapiens
63 SIRT7  
Affinity Capture-MS Homo sapiens
64 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
65 EBNA1BP2 10969
Proximity Label-MS Homo sapiens
66 NOM1  
Proximity Label-MS Homo sapiens
67 DHX37  
Proximity Label-MS Homo sapiens
68 ANP32E 81611
Proximity Label-MS Homo sapiens
69 WIBG 84305
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
70 RRP15  
Proximity Label-MS Homo sapiens
71 FN1 2335
Affinity Capture-MS Homo sapiens
72 MFAP1  
Proximity Label-MS Homo sapiens
73 RPA3 6119
Proximity Label-MS Homo sapiens
74 LTV1  
Affinity Capture-MS Homo sapiens
75 DCC  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
76 HIST1H1A 3024
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
77 Rpl35 66489
Affinity Capture-MS Mus musculus
78 CTNNA1 1495
Cross-Linking-MS (XL-MS) Homo sapiens
79 HEATR1 55127
Proximity Label-MS Homo sapiens
80 GNL3 26354
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
81 DDX55  
Proximity Label-MS Homo sapiens
82 NGDN  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
83 RPS16 6217
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
84 TLX1  
Affinity Capture-MS Homo sapiens
85 YBX1 4904
Affinity Capture-MS Homo sapiens
86 RPS27A 6233
Co-fractionation Homo sapiens
87 RRP36 88745
Proximity Label-MS Homo sapiens
88 RRS1 23212
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
89 RGPD8  
Affinity Capture-MS Homo sapiens
90 TCEB3 6924
Proximity Label-MS Homo sapiens
91 PNISR  
Two-hybrid Homo sapiens
92 TBL3 10607
Proximity Label-MS Homo sapiens
93 G3BP2 9908
Affinity Capture-MS Homo sapiens
94 RPS15A 6210
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
95 DYNC1H1 1778
Co-fractionation Homo sapiens
96 DDX27 55661
Proximity Label-MS Homo sapiens
97 KRR1 11103
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
98 LARP7 51574
Proximity Label-MS Homo sapiens
99 NEIL1  
Affinity Capture-MS Homo sapiens
100 NCL 4691
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
101 EIF4B 1975
Affinity Capture-MS Homo sapiens
102 ACO2 50
Affinity Capture-MS Homo sapiens
103 RPL23A 6147
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
104 VANGL1 81839
Affinity Capture-MS Homo sapiens
105 PHF8  
Proximity Label-MS Homo sapiens
106 NVL  
Proximity Label-MS Homo sapiens
107 SPRTN  
Affinity Capture-MS Homo sapiens
108 WDR3  
Proximity Label-MS Homo sapiens
109 EIF2S3 1968
Affinity Capture-MS Homo sapiens
110 KIAA0020 9933
Proximity Label-MS Homo sapiens
111 RPS17 6218
Co-fractionation Homo sapiens
112 TARDBP 23435
Affinity Capture-MS Homo sapiens
113 BTF3 689
Affinity Capture-MS Homo sapiens
114 VPRBP 9730
Affinity Capture-MS Homo sapiens
115 URB1 9875
Proximity Label-MS Homo sapiens
116 NOP56 10528
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
117 RPL14 9045
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
118 RIOK3 8780
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
119 CAND1 55832
Affinity Capture-MS Homo sapiens
120 DIEXF  
Proximity Label-MS Homo sapiens
121 PWP2 5822
Proximity Label-MS Homo sapiens
122 MPHOSPH10 10199
Proximity Label-MS Homo sapiens
123 RPS3 6188
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
124 RPS18 6222
Co-fractionation Homo sapiens
125 PSIP1 11168
Co-fractionation Homo sapiens
126 B3GNT2 10678
Affinity Capture-MS Homo sapiens
127 DDX24 57062
Proximity Label-MS Homo sapiens
128 H1FX 8971
Proximity Label-MS Homo sapiens
129 RRP12 23223
Proximity Label-MS Homo sapiens
130 PCBD1 5092
Reconstituted Complex Homo sapiens
131 PRC1 9055
Affinity Capture-MS Homo sapiens
132 NPM1 4869
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
133 KRI1  
Proximity Label-MS Homo sapiens
134 KLF4  
Affinity Capture-MS Homo sapiens
135 VCAM1 7412
Affinity Capture-MS Homo sapiens
136 E4F1  
Affinity Capture-MS Homo sapiens
137 Eif3a 13669
Affinity Capture-MS Mus musculus
138 CUL1 8454
Affinity Capture-MS Homo sapiens
139 RBM42  
Affinity Capture-MS Homo sapiens
140 RRP7A 27341
Proximity Label-MS Homo sapiens
141 DHX36 170506
Cross-Linking-MS (XL-MS) Homo sapiens
Affinity Capture-MS Homo sapiens
142 RPL10L 140801
Co-fractionation Homo sapiens
143 PES1 23481
Proximity Label-MS Homo sapiens
144 Nup188  
Affinity Capture-MS Mus musculus
145 VRK3 51231
Affinity Capture-MS Homo sapiens
146 DDX21 9188
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
147 RPL4 6124
Co-fractionation Homo sapiens
148 RBM28 55131
Proximity Label-MS Homo sapiens
149 DRG1 4733
Affinity Capture-MS Homo sapiens
150 MSX2  
Affinity Capture-MS Homo sapiens
151 EIF2A 83939
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
152 VRK1 7443
Affinity Capture-MS Homo sapiens
153 NFIA 4774
Co-fractionation Homo sapiens
154 NCAPD3 23310
Proximity Label-MS Homo sapiens
155 NKRF 55922
Proximity Label-MS Homo sapiens
156 REXO4  
Proximity Label-MS Homo sapiens
157 STK17B 9262
Two-hybrid Homo sapiens
158 UBTF 7343
Proximity Label-MS Homo sapiens
159 LYAR 55646
Proximity Label-MS Homo sapiens
160 Rrbp1  
Affinity Capture-MS Mus musculus
161 MAGOH 4116
Affinity Capture-MS Homo sapiens
162 RPLP0 6175
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
163 RPLP0P6 220717
Co-fractionation Homo sapiens
164 KLF12  
Proximity Label-MS Homo sapiens
165 CYLD  
Affinity Capture-MS Homo sapiens
166 RSL1D1 26156
Proximity Label-MS Homo sapiens
167 PPAN-P2RY11  
Proximity Label-MS Homo sapiens
168 RPS2 6187
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
169 EIF6 3692
Co-fractionation Homo sapiens
170 RC3H2  
Affinity Capture-MS Homo sapiens
171 IKZF3  
Affinity Capture-MS Homo sapiens
172 SRSF5 6430
Affinity Capture-MS Homo sapiens
173 EGFR 1956
Negative Genetic Homo sapiens
174 IKZF1  
Affinity Capture-MS Homo sapiens
175 RPS27 6232
Co-fractionation Homo sapiens
176 CDK2 1017
Affinity Capture-MS Homo sapiens
177 MYC  
Affinity Capture-MS Homo sapiens
178 CEBPZ  
Proximity Label-MS Homo sapiens
179 SET 6418
Proximity Label-MS Homo sapiens
180 DDRGK1 65992
Affinity Capture-MS Homo sapiens
181 EDF1 8721
Proximity Label-MS Homo sapiens
182 PPM1G 5496
Proximity Label-MS Homo sapiens
183 HIST1H1T 3010
Affinity Capture-MS Homo sapiens
184 FTSJ3 117246
Proximity Label-MS Homo sapiens
185 HUWE1 10075
Affinity Capture-MS Homo sapiens
186 EEF1A1 1915
Co-fractionation Homo sapiens
187 RPL13 6137
Proximity Label-MS Homo sapiens
188 SURF6  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
189 RC3H1 149041
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
190 ILF3 3609
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
191 TP53 7157
Affinity Capture-MS Homo sapiens
192 SRP19 6728
Affinity Capture-MS Homo sapiens
193 KNOP1 400506
Proximity Label-MS Homo sapiens
194 RPS4X 6191
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
195 RPL23 9349
Co-fractionation Homo sapiens
196 RPS10P5 93144
Co-fractionation Homo sapiens
197 CAPRIN1 4076
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
198 RPS5 6193
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
199 NIFK 84365
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
200 POU2F1 5451
Affinity Capture-MS Homo sapiens
201 RPS26 6231
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
202 NOC2L 26155
Proximity Label-MS Homo sapiens
203 EIF3J 8669
Proximity Label-MS Homo sapiens
204 CXorf56  
Proximity Label-MS Homo sapiens
205 C1QBP 708
Proximity Label-MS Homo sapiens
206 KRAS 3845
Negative Genetic Homo sapiens
207 PSMD1 5707
Proximity Label-MS Homo sapiens
208 TEX10 54881
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
209 RALY 22913
Proximity Label-MS Homo sapiens
210 ZNF668  
Affinity Capture-MS Homo sapiens
211 RPSA 3921
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
212 SENP3 26168
Proximity Label-MS Homo sapiens
213 RIOK1 83732
Co-crystal Structure Homo sapiens
214 NOP58 51602
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
215 BBS7 55212
Proximity Label-MS Homo sapiens
216 CENPC  
Proximity Label-MS Homo sapiens
217 GATA2  
Affinity Capture-MS Homo sapiens
218 RPS19 6223
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
219 BYSL 705
Affinity Capture-MS Homo sapiens
Co-crystal Structure Homo sapiens
220 GKAP1  
Proximity Label-MS Homo sapiens
221 XRN2 22803
Proximity Label-MS Homo sapiens
222 Ktn1  
Affinity Capture-MS Mus musculus
223 FAU 2197
Co-fractionation Homo sapiens
224 CDK11A 728642
Proximity Label-MS Homo sapiens
225 ATG13 9776
Affinity Capture-MS Homo sapiens
226 CAPZB 832
Affinity Capture-MS Homo sapiens
227 RPL10A 4736
Co-fractionation Homo sapiens
228 TAF9 6880
Reconstituted Complex Homo sapiens
229 CCDC137  
Proximity Label-MS Homo sapiens
230 EIF3B 8662
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
231 RRP9 9136
Proximity Label-MS Homo sapiens
232 ITGA4 3676
Affinity Capture-MS Homo sapiens
233 RPL29 6159
Co-fractionation Homo sapiens
234 DDX18 8886
Proximity Label-MS Homo sapiens
235 UTP20 27340
Proximity Label-MS Homo sapiens
236 MTDH 92140
Proximity Label-MS Homo sapiens
237 TFCP2 7024
Affinity Capture-MS Homo sapiens
238 RBM8A 9939
Affinity Capture-MS Homo sapiens
239 RBM19 9904
Proximity Label-MS Homo sapiens
240 LIN28A  
Affinity Capture-MS Homo sapiens
241 CCDC168  
Proximity Label-MS Homo sapiens
242 BRIX1 55299
Proximity Label-MS Homo sapiens
243 RPL27 6155
Co-fractionation Homo sapiens
244 DDX31  
Proximity Label-MS Homo sapiens
245 PNO1 56902
Co-fractionation Homo sapiens
246 NUP188 23511
Co-fractionation Homo sapiens
247 ZCCHC9  
Affinity Capture-MS Homo sapiens
248 RPL9 6133
Co-fractionation Homo sapiens
249 PINX1  
Proximity Label-MS Homo sapiens
250 CUL4B 8450
Affinity Capture-MS Homo sapiens
251 PHAX  
Affinity Capture-MS Homo sapiens
252 RPS10 6204
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
253 BLM 641
Proximity Label-MS Homo sapiens
254 NOP2 4839
Proximity Label-MS Homo sapiens
255 RPL5 6125
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
256 CHMP4B 128866
Affinity Capture-MS Homo sapiens
257 RRM1 6240
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
258 LAS1L 81887
Proximity Label-MS Homo sapiens
259 U2AF2 11338
Co-fractionation Homo sapiens
260 RPL36 25873
Co-fractionation Homo sapiens
261 RPA4  
Proximity Label-MS Homo sapiens
262 RPLP1 6176
Co-fractionation Homo sapiens
263 DHX9 1660
Co-fractionation Homo sapiens
264 ENY2 56943
Affinity Capture-MS Homo sapiens
265 MYBBP1A 10514
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
266 DNTTIP2  
Proximity Label-MS Homo sapiens
267 RPL11 6135
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
268 HNRNPDL 9987
Proximity Label-MS Homo sapiens
269 SPATS2L 26010
Proximity Label-MS Homo sapiens
270 MSH2 4436
Co-fractionation Homo sapiens
271 TDRD3  
Proximity Label-MS Homo sapiens
272 ECT2 1894
Affinity Capture-MS Homo sapiens
273 EEF2 1938
Co-fractionation Homo sapiens
274 HIST1H1E 3008
Affinity Capture-MS Homo sapiens
275 PHF2  
Proximity Label-MS Homo sapiens
276 RPL21 6144
Co-fractionation Homo sapiens
277 ISG20L2 81875
Proximity Label-MS Homo sapiens
278 URB2  
Proximity Label-MS Homo sapiens
279 PDCD11 22984
Proximity Label-MS Homo sapiens
280 NCAPH 23397
Affinity Capture-MS Homo sapiens
281 PRPF19 27339
Co-fractionation Homo sapiens
282 PSPC1 55269
Affinity Capture-MS Homo sapiens
283 RPS13 6207
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
284 HIST1H1C 3006
Affinity Capture-MS Homo sapiens
285 RPS14 6208
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
286 RPL12 6136
Co-fractionation Homo sapiens
287 RPL22 6146
Co-fractionation Homo sapiens
288 HP1BP3 50809
Co-fractionation Homo sapiens
289 RPL18 6141
Co-fractionation Homo sapiens
290 RNF2  
Affinity Capture-MS Homo sapiens
291 ZC3HAV1 56829
Affinity Capture-MS Homo sapiens
292 KIAA0368 23392
Proximity Label-MS Homo sapiens
293 Eif3e 16341
Affinity Capture-MS Mus musculus
294 TSR1 55720
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
295 H2AFY 9555
Proximity Label-MS Homo sapiens
296 C3orf17  
Proximity Label-MS Homo sapiens
297 DDX50 79009
Proximity Label-MS Homo sapiens
298 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
299 RPS25 6230
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
300 NUP205 23165
Proximity Label-MS Homo sapiens
301 FBXL6  
Affinity Capture-MS Homo sapiens
302 NDUFAF2  
Co-fractionation Homo sapiens
303 RPL6 6128
Co-fractionation Homo sapiens
304 RPS21 6227
Co-fractionation Homo sapiens
305 USP36  
Proximity Label-MS Homo sapiens
306 HNRNPM 4670
Co-fractionation Homo sapiens
307 TUBB3 10381
Affinity Capture-MS Homo sapiens
308 G3BP1 10146
Affinity Capture-MS Homo sapiens
309 FANCI 55215
Proximity Label-MS Homo sapiens
310 PDZD8 118987
Affinity Capture-MS Homo sapiens
311 UFL1 23376
Affinity Capture-MS Homo sapiens
312 SEC61B 10952
Affinity Capture-MS Homo sapiens
313 RPS7 6201
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
314 RPL8 6132
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
315 ANKRD11 29123
Proximity Label-MS Homo sapiens
316 RPS27L 51065
Co-fractionation Homo sapiens
317 SERBP1 26135
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
318 PRUNE2  
Co-fractionation Homo sapiens
319 RBM34  
Proximity Label-MS Homo sapiens
320 NOL9 79707
Proximity Label-MS Homo sapiens
321 DDX56  
Proximity Label-MS Homo sapiens
322 HIST1H2AE 3012
Affinity Capture-MS Homo sapiens
323 EIF5 1983
Affinity Capture-MS Homo sapiens
324 BOP1 23246
Proximity Label-MS Homo sapiens
325 GNL2 29889
Proximity Label-MS Homo sapiens
326 UBE2H 7328
Affinity Capture-MS Homo sapiens
327 SLFN11 91607
Affinity Capture-MS Homo sapiens
328 RIT1 6016
Negative Genetic Homo sapiens
329 NOLC1 9221
Proximity Label-MS Homo sapiens
330 COIL  
Proximity Label-MS Homo sapiens
331 RPS3A 6189
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
332 RPL30 6156
Co-fractionation Homo sapiens
333 SSB 6741
Affinity Capture-MS Homo sapiens
334 RPL37A 6168
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
335 CTNNBL1 56259
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
336 ESF1 51575
Proximity Label-MS Homo sapiens
337 RPL10 6134
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
338 RPL15 6138
Co-fractionation Homo sapiens
339 SRFBP1  
Proximity Label-MS Homo sapiens
340 WDR36 134430
Proximity Label-MS Homo sapiens
341 ILF2 3608
Co-fractionation Homo sapiens
342 PPP1CC 5501
Proximity Label-MS Homo sapiens
343 TOP2A 7153
Affinity Capture-MS Homo sapiens
344 RPS20 6224
Co-fractionation Homo sapiens
345 RNF10  
Proximity Label-MS Homo sapiens
346 C8orf59  
Proximity Label-MS Homo sapiens
347 DYRK1A 1859
Affinity Capture-MS Homo sapiens
348 PABPC4L 132430
Affinity Capture-MS Homo sapiens
349 COPS5 10987
Affinity Capture-MS Homo sapiens
350 FBXW7  
Affinity Capture-MS Homo sapiens
351 RPL24 6152
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
352 RPS12 6206
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
353 MRPS26 64949
Affinity Capture-MS Homo sapiens
354 PRKRA 8575
Affinity Capture-MS Homo sapiens
355 EED  
Affinity Capture-MS Homo sapiens
356 SRP68 6730
Affinity Capture-MS Homo sapiens
357 RRP8  
Proximity Label-MS Homo sapiens
358 CDCA8 55143
Proximity Label-MS Homo sapiens
359 MYCN  
Affinity Capture-MS Homo sapiens
360 MAK16  
Proximity Label-MS Homo sapiens
361 C18orf21  
Proximity Label-MS Homo sapiens
362 CTCF  
Affinity Capture-MS Homo sapiens
363 ESR1  
Affinity Capture-MS Homo sapiens
364 CPEB1  
Affinity Capture-MS Homo sapiens
365 RPS23 6228
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
366 PRPF6 24148
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
367 PPP1CA 5499
Co-fractionation Homo sapiens
368 SRP9 6726
Affinity Capture-MS Homo sapiens
369 LOC255308 255308
Co-fractionation Homo sapiens
370 MOGS 7841
Co-fractionation Homo sapiens
371 SF3B6 51639
Co-fractionation Homo sapiens
372 DDX54 79039
Proximity Label-MS Homo sapiens
373 ZC3H15 55854
Proximity Label-MS Homo sapiens
374 NUSAP1 51203
Proximity Label-MS Homo sapiens
375 FGF13  
Affinity Capture-MS Homo sapiens
376 GLTSCR2  
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
377 U2AF1 7307
Co-fractionation Homo sapiens
378 GNL3L 54552
Proximity Label-MS Homo sapiens
379 NEURL4  
Affinity Capture-MS Homo sapiens
380 CCDC59  
Proximity Label-MS Homo sapiens
381 ZNF644  
Proximity Label-MS Homo sapiens
382 DDX6 1656
Affinity Capture-MS Homo sapiens
383 BMS1  
Proximity Label-MS Homo sapiens
384 RPLP2 6181
Co-fractionation Homo sapiens
385 FANCD2  
Affinity Capture-MS Homo sapiens
386 RPL7A 6130
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
387 OTUD1 220213
Affinity Capture-MS Homo sapiens
388 DNAJC2 27000
Affinity Capture-MS Homo sapiens
389 RPL35 11224
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
390 NAT10 55226
Proximity Label-MS Homo sapiens
391 CTNNB1 1499
Affinity Capture-MS Homo sapiens
392 SRSF1 6426
Affinity Capture-MS Homo sapiens
393 RPS6 6194
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
394 CTTN 2017
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
395 RPL3 6122
Co-fractionation Homo sapiens
396 RPL7 6129
Co-fractionation Homo sapiens
397 AURKB 9212
Affinity Capture-MS Homo sapiens
398 DKC1 1736
Proximity Label-MS Homo sapiens
399 TXNL1 9352
Proximity Label-MS Homo sapiens
400 UPF3B 65109
Proximity Label-MS Homo sapiens
401 RPS29 6235
Co-fractionation Homo sapiens
402 ZC3H3  
Affinity Capture-MS Homo sapiens
403 DDX52  
Proximity Label-MS Homo sapiens
404 GNB2L1 10399
Affinity Capture-MS Homo sapiens
405 DDX49 54555
Proximity Label-MS Homo sapiens
406 MTHFD1L 25902
Cross-Linking-MS (XL-MS) Homo sapiens
407 Cbx1  
Affinity Capture-MS Mus musculus
408 EXOSC10 5394
Proximity Label-MS Homo sapiens
409 SPTAN1 6709
Co-fractionation Homo sapiens
410 SUPT5H 6829
Proximity Label-MS Homo sapiens
411 LARP4B 23185
Proximity Label-MS Homo sapiens
412 NOL10  
Proximity Label-MS Homo sapiens
413 ZNF746  
Affinity Capture-MS Homo sapiens
414 CUL5 8065
Affinity Capture-MS Homo sapiens
415 SMURF1 57154
Affinity Capture-MS Homo sapiens
416 RPS15 6209
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
417 SRP72 6731
Affinity Capture-MS Homo sapiens
418 EIF4A3 9775
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
419 RPS28 6234
Co-fractionation Homo sapiens
420 MOV10 4343
Co-fractionation Homo sapiens
421 ZNF106  
Proximity Label-MS Homo sapiens
422 TRIM31  
Affinity Capture-MS Homo sapiens
423 RPS8 6202
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
424 HNRNPU 3192
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
425 C9orf72  
Affinity Capture-MS Homo sapiens
426 STRBP 55342
Proximity Label-MS Homo sapiens
427 RPL17 6139
Co-fractionation Homo sapiens
428 PARN  
Proximity Label-MS Homo sapiens
View the network image/svg+xml
 Pathways in which RPS24 is involved
PathwayEvidenceSource
Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S TAS Reactome
Axon guidance IEA Reactome
Cap-dependent Translation Initiation TAS Reactome
Cellular response to starvation IEA Reactome
Cellular responses to stimuli IEA Reactome
Cellular responses to stress IEA Reactome
Developmental Biology IEA Reactome
Disease TAS Reactome
Eukaryotic Translation Elongation IEA Reactome
Eukaryotic Translation Initiation TAS Reactome
Eukaryotic Translation Termination IEA Reactome
Formation of a pool of free 40S subunits TAS Reactome
Formation of the ternary complex, and subsequently, the 43S complex TAS Reactome
GTP hydrolysis and joining of the 60S ribosomal subunit TAS Reactome
Infectious disease TAS Reactome
Influenza Infection TAS Reactome
Influenza Viral RNA Transcription and Replication TAS Reactome
L13a-mediated translational silencing of Ceruloplasmin expression TAS Reactome
Major pathway of rRNA processing in the nucleolus and cytosol TAS Reactome
Metabolism IEA Reactome
Metabolism of amino acids and derivatives IEA Reactome
Metabolism of proteins TAS Reactome
Metabolism of proteins IEA Reactome
Metabolism of RNA TAS Reactome
Nervous system development IEA Reactome
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) TAS Reactome
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) TAS Reactome
Nonsense-Mediated Decay (NMD) TAS Reactome
Peptide chain elongation IEA Reactome
Regulation of expression of SLITs and ROBOs IEA Reactome
Response of EIF2AK4 (GCN2) to amino acid deficiency IEA Reactome
Ribosomal scanning and start codon recognition TAS Reactome
rRNA processing TAS Reactome
rRNA processing in the nucleus and cytosol TAS Reactome
SARS-CoV Infections TAS Reactome
SARS-CoV-1 Infection TAS Reactome
SARS-CoV-1 modulates host translation machinery TAS Reactome
SARS-CoV-1-host interactions TAS Reactome
SARS-CoV-2 Infection TAS Reactome
SARS-CoV-2 modulates host translation machinery TAS Reactome
SARS-CoV-2-host interactions TAS Reactome
Selenoamino acid metabolism IEA Reactome
Selenocysteine synthesis IEA Reactome
Signaling by ROBO receptors IEA Reactome
SRP-dependent cotranslational protein targeting to membrane IEA Reactome
SRP-dependent cotranslational protein targeting to membrane TAS Reactome
Translation TAS Reactome
Translation IEA Reactome
Translation initiation complex formation TAS Reactome
Viral Infection Pathways TAS Reactome
Viral mRNA Translation TAS Reactome





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