Gene ontology annotations for SKIV2L
Experiment description of studies that identified SKIV2L in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
497
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
6
Experiment ID
498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
7
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
8
Experiment ID
211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
IGROV1
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
9
Experiment ID
212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
OVCAR-3
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
10
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for SKIV2L
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
CBS
875
Co-fractionation
Homo sapiens
2
UBE2H
7328
Affinity Capture-MS
Homo sapiens
3
WDR1
9948
Two-hybrid
Homo sapiens
4
FERMT1
55612
Co-fractionation
Homo sapiens
5
EXOSC10
5394
Two-hybrid
Homo sapiens
6
TNRC17
Two-hybrid
Homo sapiens
7
Eif3a
13669
Affinity Capture-MS
Mus musculus
8
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
9
RHOU
58480
Reconstituted Complex
Homo sapiens
10
PFDN6
10471
Affinity Capture-MS
Homo sapiens
11
LGR4
55366
Affinity Capture-MS
Homo sapiens
12
ITSN1
6453
Co-fractionation
Homo sapiens
13
SLFN11
91607
Affinity Capture-MS
Homo sapiens
14
CDC73
Affinity Capture-MS
Homo sapiens
15
RBM8A
9939
Affinity Capture-MS
Homo sapiens
16
KIF14
9928
Affinity Capture-MS
Homo sapiens
17
EIF2S3
1968
Affinity Capture-MS
Homo sapiens
18
C9orf78
51759
Affinity Capture-MS
Homo sapiens
19
LIN28A
Affinity Capture-MS
Homo sapiens
20
CACNB3
Two-hybrid
Homo sapiens
21
MFSD4
Affinity Capture-MS
Homo sapiens
22
SIRT7
Affinity Capture-MS
Homo sapiens
23
ZNF746
Affinity Capture-MS
Homo sapiens
24
RPA2
6118
Proximity Label-MS
Homo sapiens
25
TTC37
9652
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
26
PRKAA2
5563
Two-hybrid
Homo sapiens
27
SRP9
6726
Affinity Capture-MS
Homo sapiens
28
GPR182
Affinity Capture-MS
Homo sapiens
29
MGARP
Affinity Capture-MS
Homo sapiens
30
RPL10
6134
Affinity Capture-MS
Homo sapiens
31
TRIM33
51592
Affinity Capture-MS
Homo sapiens
32
EGFR
1956
Affinity Capture-MS
Homo sapiens
33
SRP72
6731
Affinity Capture-MS
Homo sapiens
34
CDKL5
Two-hybrid
Homo sapiens
35
CAPRIN1
4076
Affinity Capture-MS
Homo sapiens
36
HSD17B13
Affinity Capture-MS
Homo sapiens
37
PMPCA
23203
Two-hybrid
Homo sapiens
38
PFDN4
5203
Affinity Capture-MS
Homo sapiens
39
FKBP5
2289
Affinity Capture-MS
Homo sapiens
40
XRN1
54464
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
41
CCT7
10574
Affinity Capture-MS
Homo sapiens
42
VBP1
7411
Affinity Capture-MS
Homo sapiens
43
KIAA1429
25962
Affinity Capture-MS
Homo sapiens
44
FBXW4
6468
Affinity Capture-MS
Homo sapiens
45
WDR61
80349
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
46
BSG
682
Affinity Capture-MS
Homo sapiens
47
PFDN2
5202
Affinity Capture-MS
Homo sapiens
48
ALYREF
10189
Co-fractionation
Homo sapiens
49
PSPC1
55269
Affinity Capture-MS
Homo sapiens
50
RPA3
6119
Proximity Label-MS
Homo sapiens
51
NDOR1
Co-fractionation
Homo sapiens
52
RAN
5901
Co-fractionation
Homo sapiens
53
TTC33
Affinity Capture-MS
Homo sapiens
54
NTRK1
4914
Affinity Capture-MS
Homo sapiens
55
GPR45
Affinity Capture-MS
Homo sapiens
56
SRSF7
6432
Affinity Capture-MS
Homo sapiens
57
SPRTN
Affinity Capture-MS
Homo sapiens
58
HIST1H1E
3008
Affinity Capture-MS
Homo sapiens
59
Rrbp1
Affinity Capture-MS
Mus musculus
60
PHF5A
84844
Affinity Capture-MS
Homo sapiens
61
FAM174A
345757
Affinity Capture-MS
Homo sapiens
62
BRD1
23774
Affinity Capture-MS
Homo sapiens
63
HIST1H1C
3006
Affinity Capture-MS
Homo sapiens
64
TRIM66
Affinity Capture-MS
Homo sapiens
65
NPM1
4869
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
66
C9orf72
Affinity Capture-MS
Homo sapiens
67
Rpl35
66489
Affinity Capture-MS
Mus musculus
68
PAF1
54623
Affinity Capture-MS
Homo sapiens
69
RAB4B
53916
Affinity Capture-MS
Homo sapiens
70
FSCN1
6624
Affinity Capture-MS
Homo sapiens
71
PLCG1
5335
Co-fractionation
Homo sapiens
72
TSSK2
Two-hybrid
Homo sapiens
73
GALNT13
114805
Two-hybrid
Homo sapiens
74
PFDN1
5201
Affinity Capture-MS
Homo sapiens
75
PFDN5
5204
Affinity Capture-MS
Homo sapiens
76
CDK11A
728642
Two-hybrid
Homo sapiens
77
EXOSC4
54512
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
78
SNRPB
6628
Two-hybrid
Homo sapiens
79
UBXN6
80700
Affinity Capture-MS
Homo sapiens
80
RPS16
6217
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which SKIV2L is involved