Gene description for RPL3
Gene name ribosomal protein L3
Gene symbol RPL3
Other names/aliases ASC-1
L3
TARBP-B
Species Homo sapiens
 Database cross references - RPL3
ExoCarta ExoCarta_6122
Vesiclepedia VP_6122
Entrez Gene 6122
HGNC 10332
MIM 604163
UniProt P39023  
 RPL3 identified in sEVs derived from the following tissue/cell type
B cells 20458337    
B cells 20458337    
B cells 20458337    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Foreskin fibroblasts 34108659    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocytes 26054723    
Lymphoma cells 34108659    
Mammary cancer-associated fibroblasts 34108659    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Mesenchymal stem cells 36408942    
Monocytic leukemia cells 34108659    
Neuroblastoma cells 25944692    
Normal mammary epithelial cells 34108659    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pluripotent stem cells 34108659    
Squamous carcinoma cells 20124223    
T lymphocytes 34108659    
Thymus 23844026    
 Gene ontology annotations for RPL3
Molecular Function
    RNA binding GO:0003723 HDA
    RNA binding GO:0003723 IBA
    structural constituent of ribosome GO:0003735 IBA
    structural constituent of ribosome GO:0003735 IDA
    structural constituent of ribosome GO:0003735 NAS
    protein binding GO:0005515 IPI
Biological Process
    cytoplasmic translation GO:0002181 IC
    translation GO:0006412 IBA
    translation GO:0006412 NAS
    cellular response to interleukin-4 GO:0071353 IEA
Subcellular Localization
    nucleus GO:0005634 HDA
    nucleolus GO:0005730 HDA
    nucleolus GO:0005730 IDA
    cytoplasm GO:0005737 HDA
    cytosol GO:0005829 IDA
    cytosol GO:0005829 TAS
    focal adhesion GO:0005925 HDA
    cytosolic large ribosomal subunit GO:0022625 HDA
    cytosolic large ribosomal subunit GO:0022625 IBA
    cytosolic large ribosomal subunit GO:0022625 IDA
    cytosolic ribosome GO:0022626 IDA
    cytosolic ribosome GO:0022626 IDA
    protein-containing complex GO:0032991 IDA
    extracellular exosome GO:0070062 HDA
 Experiment description of studies that identified RPL3 in sEVs
1
Experiment ID 79
MISEV standards
✘ Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 1
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
2
Experiment ID 80
MISEV standards
✘ Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis -Sample 2
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
3
Experiment ID 81
MISEV standards
✘ Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 3
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
4
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
6
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
7
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
8
Experiment ID 412
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MCF7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
9
Experiment ID 414
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
10
Experiment ID 426
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
11
Experiment ID 427
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
12
Experiment ID 494
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD151|CD63|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Osteoarthritic cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
13
Experiment ID 496
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Healthy cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
14
Experiment ID 497
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
15
Experiment ID 498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
16
Experiment ID 207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DKO-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
17
Experiment ID 208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name Dks-8
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
18
Experiment ID 209
MISEV standards
✘ Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DLD-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
19
Experiment ID 407
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
20
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
21
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
22
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
23
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
24
Experiment ID 405
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Foreskin fibroblasts
Sample name BJ
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
25
Experiment ID 363
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
26
Experiment ID 364
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
27
Experiment ID 365
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
28
Experiment ID 234
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-C3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
29
Experiment ID 235
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
30
Experiment ID 236
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name MHCC97L
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
31
Experiment ID 237
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
32
Experiment ID 417
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Lymphoma cells
Sample name Raji
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
33
Experiment ID 411
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Mammary cancer-associated fibroblasts
Sample name mCAF
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
34
Experiment ID 254
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name MNT-1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
35
Experiment ID 255
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name G1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
36
Experiment ID 256
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 501mel
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
37
Experiment ID 257
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name Daju
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
38
Experiment ID 258
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name SKMEL28
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
39
Experiment ID 259
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name A375M
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
40
Experiment ID 488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
41
Experiment ID 418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
42
Experiment ID 224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25944692    
Organism Homo sapiens
Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name Oncotarget
Publication year 2015
Sample Neuroblastoma cells
Sample name SH-SY5Y
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
43
Experiment ID 413
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Normal mammary epithelial cells
Sample name MCF10A
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
44
Experiment ID 211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
45
Experiment ID 212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
46
Experiment ID 406
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name BxPC3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
47
Experiment ID 415
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
48
Experiment ID 434
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
49
Experiment ID 435
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
50
Experiment ID 408
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPDE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
51
Experiment ID 409
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPNE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
52
Experiment ID 416
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pluripotent stem cells
Sample name PSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
53
Experiment ID 191
MISEV standards
✘ Biophysical techniques
✔
Alix|CD81|CD9
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20124223    
Organism Homo sapiens
Experiment description Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors "Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK."
Journal name Mol Cell Proteomics
Publication year 2010
Sample Squamous carcinoma cells
Sample name Squamous carcinoma cell (A431)
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
54
Experiment ID 410
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample T lymphocytes
Sample name Jurkat
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
55
Experiment ID 217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RPL3
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Mdm2  
Affinity Capture-MS Mus musculus
2 SPATS2  
Affinity Capture-MS Homo sapiens
3 ISG15 9636
Reconstituted Complex Homo sapiens
4 TRMT1L 81627
Affinity Capture-MS Homo sapiens
5 ZNF771  
Affinity Capture-MS Homo sapiens
6 UBL4A 8266
Affinity Capture-MS Homo sapiens
7 ZBTB11  
Affinity Capture-MS Homo sapiens
8 AATF  
Affinity Capture-MS Homo sapiens
9 ZNF346  
Affinity Capture-MS Homo sapiens
10 TBC1D4  
Co-fractionation Homo sapiens
11 SRPK2 6733
Affinity Capture-MS Homo sapiens
12 CSNK1A1 1452
Affinity Capture-MS Homo sapiens
13 ACTC1 70
Affinity Capture-MS Homo sapiens
14 BRCA1 672
Affinity Capture-MS Homo sapiens
15 NMNAT1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
16 KIF20A 10112
Affinity Capture-MS Homo sapiens
17 PNMAL1  
Affinity Capture-MS Homo sapiens
18 IGFBP4 3487
Affinity Capture-MS Homo sapiens
19 UTP3 57050
Affinity Capture-MS Homo sapiens
20 SOX2  
Affinity Capture-MS Homo sapiens
21 APEX1 328
Affinity Capture-MS Homo sapiens
22 NOL8  
Affinity Capture-MS Homo sapiens
23 CUL7 9820
Affinity Capture-MS Homo sapiens
24 PBRM1 55193
Affinity Capture-MS Homo sapiens
25 GPATCH4 54865
Affinity Capture-MS Homo sapiens
26 NKRF 55922
Affinity Capture-MS Homo sapiens
27 WHSC1 7468
Affinity Capture-MS Homo sapiens
28 DARS 1615
Co-fractionation Homo sapiens
29 KIF23 9493
Affinity Capture-MS Homo sapiens
30 NDRG1 10397
Affinity Capture-MS Homo sapiens
31 SF3B1 23451
Affinity Capture-RNA Homo sapiens
Affinity Capture-MS Homo sapiens
32 CDH2 1000
Co-fractionation Homo sapiens
33 METAP2 10988
Affinity Capture-MS Homo sapiens
34 BHLHA15  
Affinity Capture-MS Homo sapiens
35 RPS9 6203
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
36 GSPT1 2935
Affinity Capture-MS Homo sapiens
37 RPF2 84154
Affinity Capture-MS Homo sapiens
38 CENPQ  
Affinity Capture-MS Homo sapiens
39 METTL18  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
40 ARIH2 10425
Affinity Capture-MS Homo sapiens
41 RPS11 6205
Co-fractionation Homo sapiens
42 SREK1 140890
Affinity Capture-MS Homo sapiens
43 RPL19 6143
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
44 KIF14 9928
Affinity Capture-MS Homo sapiens
45 EMC9  
Affinity Capture-MS Homo sapiens
46 TFB1M  
Affinity Capture-MS Homo sapiens
47 CHMP4C 92421
Affinity Capture-MS Homo sapiens
48 LIN28B  
Affinity Capture-MS Homo sapiens
49 GTPBP10  
Affinity Capture-MS Homo sapiens
50 IFIT5 24138
Affinity Capture-MS Homo sapiens
51 TARBP2  
Affinity Capture-MS Homo sapiens
52 RRP9 9136
Affinity Capture-MS Homo sapiens
53 RBM4B  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
54 TUFM 7284
Co-fractionation Homo sapiens
55 HIST1H2AM 8336
Affinity Capture-MS Homo sapiens
56 RPL18A 6142
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
57 PABPC1 26986
Co-fractionation Homo sapiens
58 Srp72  
Affinity Capture-MS Mus musculus
59 TRIM21 6737
Affinity Capture-MS Homo sapiens
60 OGT 8473
Reconstituted Complex Homo sapiens
61 RPL31 6160
Co-fractionation Homo sapiens
62 GTF3C2  
Affinity Capture-MS Homo sapiens
63 CBX6  
Affinity Capture-MS Homo sapiens
64 HIST1H1C 3006
Affinity Capture-MS Homo sapiens
65 ZFP91 80829
Affinity Capture-MS Homo sapiens
66 CUL2 8453
Affinity Capture-MS Homo sapiens
67 RRP1B 23076
Affinity Capture-MS Homo sapiens
68 SRPK3  
Affinity Capture-MS Homo sapiens
69 MAGEB2 4113
Affinity Capture-MS Homo sapiens
70 RPS26P11  
Affinity Capture-MS Homo sapiens
71 SEC61B 10952
Affinity Capture-MS Homo sapiens
72 SRPK1 6732
Affinity Capture-MS Homo sapiens
73 CPNE4 131034
Affinity Capture-MS Homo sapiens
74 CD3EAP  
Proximity Label-MS Homo sapiens
75 CNBP 7555
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
76 ANLN 54443
Affinity Capture-MS Homo sapiens
77 PHLPP1  
Proximity Label-MS Homo sapiens
78 BRD7  
Affinity Capture-MS Homo sapiens
79 TMPO 7112
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
80 RBM39 9584
Affinity Capture-MS Homo sapiens
81 ABT1 29777
Affinity Capture-MS Homo sapiens
82 SIRT7  
Affinity Capture-MS Homo sapiens
83 IFI16 3428
Affinity Capture-MS Homo sapiens
84 MRPL16  
Affinity Capture-MS Homo sapiens
85 NPM3 10360
Affinity Capture-MS Homo sapiens
86 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
87 WDR55  
Affinity Capture-MS Homo sapiens
88 MTNR1A  
Two-hybrid Homo sapiens
89 EBNA1BP2 10969
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
90 PAPD5 64282
Affinity Capture-MS Homo sapiens
91 NOM1  
Affinity Capture-MS Homo sapiens
92 RPL7L1 285855
Affinity Capture-MS Homo sapiens
93 NIP7 51388
Affinity Capture-MS Homo sapiens
94 FN1 2335
Affinity Capture-MS Homo sapiens
95 TBP  
Affinity Capture-MS Homo sapiens
96 ZNF512  
Affinity Capture-MS Homo sapiens
97 HIST1H1B 3009
Affinity Capture-MS Homo sapiens
98 PCBP1 5093
Affinity Capture-MS Homo sapiens
99 RPA3 6119
Proximity Label-MS Homo sapiens
100 SIK1  
Two-hybrid Homo sapiens
101 MAGEB10  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
102 RPL35A 6165
Co-fractionation Homo sapiens
103 DDX54 79039
Affinity Capture-MS Homo sapiens
104 HIST1H1A 3024
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
105 PEX3 8504
Proximity Label-MS Homo sapiens
106 MRPL18 29074
Affinity Capture-MS Homo sapiens
107 DDX55  
Affinity Capture-MS Homo sapiens
108 NGDN  
Affinity Capture-MS Homo sapiens
109 RPS16 6217
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
110 YBX1 4904
Affinity Capture-MS Homo sapiens
111 GRK5 2869
Affinity Capture-MS Homo sapiens
112 C8orf33 65265
Affinity Capture-MS Homo sapiens
113 NVL  
Affinity Capture-MS Homo sapiens
114 RRS1 23212
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
115 ZEB1  
Affinity Capture-MS Homo sapiens
116 MRPS18C  
Affinity Capture-MS Homo sapiens
117 RRP1 8568
Affinity Capture-MS Homo sapiens
118 C9orf114  
Affinity Capture-MS Homo sapiens
119 DIMT1 27292
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
120 G3BP2 9908
Affinity Capture-MS Homo sapiens
121 H2AFB3  
Affinity Capture-MS Homo sapiens
122 TAF1D  
Affinity Capture-MS Homo sapiens
123 RPS15A 6210
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
124 KRR1 11103
Affinity Capture-MS Homo sapiens
125 LARP7 51574
Affinity Capture-MS Homo sapiens
126 NEIL1  
Affinity Capture-MS Homo sapiens
127 RPS24 6229
Co-fractionation Homo sapiens
128 NCL 4691
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
129 ATG4B 23192
Affinity Capture-MS Homo sapiens
130 ZNF768 79724
Affinity Capture-MS Homo sapiens
131 RPL23AP32 56969
Affinity Capture-MS Homo sapiens
132 C14orf169  
Affinity Capture-MS Homo sapiens
133 PPAN 56342
Affinity Capture-MS Homo sapiens
134 MATN2 4147
Affinity Capture-MS Homo sapiens
135 MRPL28 10573
Affinity Capture-MS Homo sapiens
136 NOP10 55505
Affinity Capture-MS Homo sapiens
137 REPIN1  
Affinity Capture-MS Homo sapiens
138 H1FOO 132243
Affinity Capture-MS Homo sapiens
139 ZBTB41  
Affinity Capture-MS Homo sapiens
140 EXOSC8  
Two-hybrid Homo sapiens
141 HERC5 51191
Affinity Capture-MS Homo sapiens
142 SEC61A1 29927
Co-fractionation Homo sapiens
143 EIF2S3 1968
Affinity Capture-MS Homo sapiens
144 KIAA0020 9933
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
145 RSL24D1  
Affinity Capture-MS Homo sapiens
146 TARDBP 23435
Affinity Capture-MS Homo sapiens
147 BTF3 689
Affinity Capture-MS Homo sapiens
148 VPRBP 9730
Affinity Capture-MS Homo sapiens
149 URB1 9875
Affinity Capture-MS Homo sapiens
150 NOP56 10528
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
151 HSP90AB1 3326
Co-fractionation Homo sapiens
152 NENF 29937
Co-fractionation Homo sapiens
153 CAND1 55832
Affinity Capture-MS Homo sapiens
154 RSBN1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
155 RBM34  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
156 RPS3 6188
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
157 RPS18 6222
Co-fractionation Homo sapiens
158 SURF2  
Affinity Capture-MS Homo sapiens
159 ZNF189  
Affinity Capture-MS Homo sapiens
160 RNPS1 10921
Co-fractionation Homo sapiens
161 PRR11  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
162 B3GNT2 10678
Affinity Capture-MS Homo sapiens
163 HSP90AA1 3320
Co-fractionation Homo sapiens
164 DDX24 57062
Affinity Capture-MS Homo sapiens
165 RRP12 23223
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
166 PRC1 9055
Affinity Capture-MS Homo sapiens
167 NPM1 4869
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
168 RECQL4  
Affinity Capture-MS Homo sapiens
169 OBSL1 23363
Affinity Capture-MS Homo sapiens
170 PAK1IP1  
Affinity Capture-MS Homo sapiens
171 GRWD1 83743
Affinity Capture-MS Homo sapiens
172 VCAM1 7412
Affinity Capture-MS Homo sapiens
173 E4F1  
Affinity Capture-MS Homo sapiens
174 MRPS7 51081
Affinity Capture-MS Homo sapiens
175 Eif3a 13669
Affinity Capture-MS Mus musculus
176 CUL1 8454
Affinity Capture-MS Homo sapiens
177 RBM42  
Affinity Capture-MS Homo sapiens
178 OASL 8638
Affinity Capture-MS Homo sapiens
179 ZNF184  
Affinity Capture-MS Homo sapiens
180 RPL10L 140801
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
181 POP1 10940
Affinity Capture-MS Homo sapiens
182 HIST2H2AB 317772
Affinity Capture-MS Homo sapiens
183 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
184 DDX21 9188
Affinity Capture-MS Homo sapiens
185 RPL4 6124
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
186 RBM28 55131
Affinity Capture-MS Homo sapiens
187 DRG1 4733
Affinity Capture-MS Homo sapiens
188 PPT2  
Co-fractionation Homo sapiens
189 GLE1 2733
Affinity Capture-MS Homo sapiens
190 ZBTB48  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
191 VRK1 7443
Affinity Capture-MS Homo sapiens
192 DDX10  
Affinity Capture-MS Homo sapiens
193 MRPL51 51258
Affinity Capture-MS Homo sapiens
194 ZNF711  
Affinity Capture-MS Homo sapiens
195 REXO4  
Affinity Capture-MS Homo sapiens
196 RLIM 51132
Affinity Capture-MS Homo sapiens
197 GAPDH 2597
Cross-Linking-MS (XL-MS) Homo sapiens
198 LYAR 55646
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
199 Rrbp1  
Affinity Capture-MS Mus musculus
200 MAGOH 4116
Affinity Capture-MS Homo sapiens
201 RPLP0 6175
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
202 RPLP0P6 220717
Co-fractionation Homo sapiens
203 TRIM31  
Affinity Capture-MS Homo sapiens
204 DDX27 55661
Affinity Capture-MS Homo sapiens
205 CYLD  
Affinity Capture-MS Homo sapiens
206 NFX1  
Affinity Capture-MS Homo sapiens
207 C7orf50 84310
Affinity Capture-MS Homo sapiens
208 KDF1  
Affinity Capture-MS Homo sapiens
209 RSL1D1 26156
Affinity Capture-MS Homo sapiens
210 FGFBP1 9982
Affinity Capture-MS Homo sapiens
211 CENPN  
Affinity Capture-MS Homo sapiens
212 PPAN-P2RY11  
Affinity Capture-MS Homo sapiens
213 RPL32 6161
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
214 ZNF770 54989
Affinity Capture-MS Homo sapiens
215 RPS2 6187
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
216 MRPS35 60488
Affinity Capture-MS Homo sapiens
217 EIF6 3692
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
218 RC3H2  
Affinity Capture-MS Homo sapiens
219 UBE2L6 9246
Affinity Capture-MS Homo sapiens
220 TAF1B  
Affinity Capture-MS Homo sapiens
221 SRSF5 6430
Affinity Capture-MS Homo sapiens
222 EGFR 1956
Affinity Capture-MS Homo sapiens
Negative Genetic Homo sapiens
223 FAM90A1  
Affinity Capture-MS Homo sapiens
224 ZCCHC7  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
225 RPS27 6232
Co-fractionation Homo sapiens
226 CDK2 1017
Affinity Capture-MS Homo sapiens
227 CEP250 11190
Affinity Capture-MS Homo sapiens
228 MAP2K3 5606
Affinity Capture-MS Homo sapiens
229 MYC  
Affinity Capture-MS Homo sapiens
230 BAG1 573
Affinity Capture-MS Homo sapiens
231 CEBPZ  
Affinity Capture-MS Homo sapiens
232 ZCCHC6 79670
Affinity Capture-MS Homo sapiens
233 GZF1  
Affinity Capture-MS Homo sapiens
234 RAI1 10743
Affinity Capture-MS Homo sapiens
235 SART3 9733
Affinity Capture-MS Homo sapiens
236 RPL23A 6147
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Co-fractionation Homo sapiens
237 DDRGK1 65992
Affinity Capture-MS Homo sapiens
238 RHOB 388
Proximity Label-MS Homo sapiens
239 NOP16 51491
Affinity Capture-MS Homo sapiens
240 H2AFB2  
Affinity Capture-MS Homo sapiens
241 MRPS17 51373
Affinity Capture-MS Homo sapiens
242 CCDC140  
Affinity Capture-MS Homo sapiens
243 HIST1H1T 3010
Affinity Capture-MS Homo sapiens
244 RPL26 6154
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
245 FTSJ3 117246
Affinity Capture-MS Homo sapiens
246 HUWE1 10075
Affinity Capture-MS Homo sapiens
247 EEF1A1 1915
Co-fractionation Homo sapiens
248 RPL13 6137
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
249 SURF6  
Affinity Capture-MS Homo sapiens
250 RAC1 5879
Affinity Capture-MS Homo sapiens
251 MKRN1 23608
Affinity Capture-MS Homo sapiens
252 RNF151  
Affinity Capture-MS Homo sapiens
253 TOE1 114034
Affinity Capture-MS Homo sapiens
254 PARP1 142
Proximity Label-MS Homo sapiens
255 ILF3 3609
Co-fractionation Homo sapiens
Affinity Capture-RNA Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
256 TP53 7157
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
257 FOLR1 2348
Affinity Capture-MS Homo sapiens
258 PURA 5813
Affinity Capture-MS Homo sapiens
259 SRP19 6728
Affinity Capture-MS Homo sapiens
260 KNOP1 400506
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
261 RPS4X 6191
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
262 UTP23  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
263 CAPRIN1 4076
Affinity Capture-MS Homo sapiens
264 TSPYL1 7259
Affinity Capture-MS Homo sapiens
265 RPS5 6193
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
266 NIFK 84365
Affinity Capture-MS Homo sapiens
267 ESR1  
Affinity Capture-MS Homo sapiens
268 BAG5 9529
Affinity Capture-MS Homo sapiens
269 STX3 6809
Cross-Linking-MS (XL-MS) Homo sapiens
270 RPL7A 6130
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
271 ARF1 375
Proximity Label-MS Homo sapiens
272 GLYR1 84656
Affinity Capture-MS Homo sapiens
273 KRAS 3845
Affinity Capture-MS Homo sapiens
Negative Genetic Homo sapiens
274 ZNF845  
Affinity Capture-MS Homo sapiens
275 ATOH1  
Affinity Capture-MS Homo sapiens
276 TEX10 54881
Affinity Capture-MS Homo sapiens
277 PRMT1 3276
Affinity Capture-MS Homo sapiens
278 PRKRIR  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
279 MECP2 4204
Affinity Capture-MS Homo sapiens
280 NUPL2 11097
Affinity Capture-MS Homo sapiens
281 ZNF668  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
282 RPSA 3921
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
283 SENP3 26168
Affinity Capture-MS Homo sapiens
284 RPL26L1 51121
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
285 ZSCAN25  
Affinity Capture-MS Homo sapiens
286 CENPC  
Affinity Capture-MS Homo sapiens
287 SDAD1  
Affinity Capture-MS Homo sapiens
288 EPB41L5 57669
Affinity Capture-MS Homo sapiens
289 RPS19 6223
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
290 SSB 6741
Affinity Capture-MS Homo sapiens
291 ATG13 9776
Affinity Capture-MS Homo sapiens
292 CAPZB 832
Affinity Capture-MS Homo sapiens
293 PARK2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
294 RPL10A 4736
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
295 LLPH  
Affinity Capture-MS Homo sapiens
296 MCM2 4171
Affinity Capture-MS Homo sapiens
297 WDR74 54663
Affinity Capture-MS Homo sapiens
298 WDR89  
Affinity Capture-MS Homo sapiens
299 CCDC137  
Affinity Capture-MS Homo sapiens
300 SPAG9 9043
Cross-Linking-MS (XL-MS) Homo sapiens
301 MPHOSPH10 10199
Affinity Capture-MS Homo sapiens
302 ANOS1 3730
Affinity Capture-MS Homo sapiens
303 TRIM56 81844
Affinity Capture-MS Homo sapiens
304 POLR1E  
Proximity Label-MS Homo sapiens
305 ZNF2  
Affinity Capture-MS Homo sapiens
306 SRP14 6727
Affinity Capture-MS Homo sapiens
307 MRS2  
Affinity Capture-MS Homo sapiens
308 HIST2H2AC 8338
Affinity Capture-MS Homo sapiens
309 STXBP3 6814
Two-hybrid Homo sapiens
310 DDX18 8886
Affinity Capture-MS Homo sapiens
311 FAM111A 63901
Affinity Capture-MS Homo sapiens
312 RBM8A 9939
Affinity Capture-MS Homo sapiens
313 RBM19 9904
Affinity Capture-MS Homo sapiens
314 HSPA8 3312
Affinity Capture-MS Homo sapiens
315 LIN28A  
Affinity Capture-MS Homo sapiens
316 BRIX1 55299
Affinity Capture-MS Homo sapiens
317 RPS4Y2 140032
Affinity Capture-MS Homo sapiens
318 NF2 4771
Affinity Capture-MS Homo sapiens
319 RPL27 6155
Co-fractionation Homo sapiens
320 DDX31  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
321 CDKN2AIP  
Affinity Capture-MS Homo sapiens
322 FOXA1  
Affinity Capture-MS Homo sapiens
323 YTHDF1 54915
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
324 RPL9 6133
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
325 PINX1  
Affinity Capture-MS Homo sapiens
326 CUL4B 8450
Affinity Capture-MS Homo sapiens
327 PLEKHO1 51177
Affinity Capture-MS Homo sapiens
328 COPE 11316
Affinity Capture-MS Homo sapiens
329 RPS10 6204
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
330 XRN1 54464
Affinity Capture-MS Homo sapiens
331 TUBGCP4 27229
Affinity Capture-MS Homo sapiens
332 NOP2 4839
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
333 RPL5 6125
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
334 CHMP4B 128866
Affinity Capture-MS Homo sapiens
335 NUMB 8650
Two-hybrid Homo sapiens
336 NTRK1 4914
Affinity Capture-MS Homo sapiens
337 HIST1H1E 3008
Affinity Capture-MS Homo sapiens
338 RPL36 25873
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
339 LOC101929876 101929876
Co-fractionation Homo sapiens
340 RPA4  
Proximity Label-MS Homo sapiens
341 DHFRL1  
Proximity Label-MS Homo sapiens
342 CDKN2AIPNL  
Affinity Capture-MS Homo sapiens
343 ENY2 56943
Affinity Capture-MS Homo sapiens
344 PELP1 27043
Affinity Capture-MS Homo sapiens
345 HDAC5 10014
Affinity Capture-MS Homo sapiens
346 DNTTIP2  
Affinity Capture-MS Homo sapiens
347 HMGB2 3148
Affinity Capture-MS Homo sapiens
348 RPL11 6135
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
349 Brwd3  
Affinity Capture-MS Mus musculus
350 SLX4  
Affinity Capture-MS Homo sapiens
351 SPATS2L 26010
Affinity Capture-MS Homo sapiens
352 KMT2A  
Affinity Capture-MS Homo sapiens
353 METTL14  
Affinity Capture-MS Homo sapiens
354 CHERP 10523
Affinity Capture-MS Homo sapiens
355 GTPBP4 23560
Affinity Capture-MS Homo sapiens
356 ECT2 1894
Affinity Capture-MS Homo sapiens
357 ZNF354A  
Affinity Capture-MS Homo sapiens
358 PHLPP2  
Affinity Capture-MS Homo sapiens
359 RPL14 9045
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
360 RPL21 6144
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
361 ISG20L2 81875
Affinity Capture-MS Homo sapiens
362 URB2  
Affinity Capture-MS Homo sapiens
363 ACE2 59272
Affinity Capture-MS Homo sapiens
364 PDCD11 22984
Affinity Capture-MS Homo sapiens
365 BUD13  
Affinity Capture-MS Homo sapiens
366 NCAPH 23397
Affinity Capture-MS Homo sapiens
367 PSPC1 55269
Affinity Capture-MS Homo sapiens
368 HJURP  
Affinity Capture-MS Homo sapiens
369 RPS13 6207
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
370 RPS14 6208
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
371 TP63  
Affinity Capture-MS Homo sapiens
372 RPL12 6136
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
373 RPL22 6146
Co-fractionation Homo sapiens
374 HP1BP3 50809
Affinity Capture-MS Homo sapiens
375 PPP6C 5537
Affinity Capture-MS Homo sapiens
376 RPLP1 6176
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
377 RPL18 6141
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
378 RNF2  
Affinity Capture-MS Homo sapiens
379 ZC3HAV1 56829
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
380 Eif3e 16341
Affinity Capture-MS Mus musculus
381 H2AFY 9555
Affinity Capture-MS Homo sapiens
382 TAF1A  
Affinity Capture-MS Homo sapiens
383 C3orf17  
Affinity Capture-MS Homo sapiens
384 ZNF574  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
385 DDX50 79009
Affinity Capture-MS Homo sapiens
386 RPL3L 6123
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
387 RPS25 6230
Co-fractionation Homo sapiens
388 EPB41L4B 54566
Affinity Capture-MS Homo sapiens
389 FBXL6  
Affinity Capture-MS Homo sapiens
390 RPL6 6128
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
391 PRDM15  
Affinity Capture-MS Homo sapiens
392 ICT1 3396
Co-fractionation Homo sapiens
393 USP36  
Affinity Capture-MS Homo sapiens
394 ZNF445  
Affinity Capture-MS Homo sapiens
395 ZZEF1 23140
Affinity Capture-MS Homo sapiens
396 PDHA1 5160
Proximity Label-MS Homo sapiens
397 G3BP1 10146
Affinity Capture-MS Homo sapiens
398 ZNF335 63925
Affinity Capture-MS Homo sapiens
399 C11orf52 91894
Proximity Label-MS Homo sapiens
400 MYBBP1A 10514
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
401 RPL34 6164
Co-fractionation Homo sapiens
402 PDZD8 118987
Affinity Capture-MS Homo sapiens
403 UFL1 23376
Affinity Capture-MS Homo sapiens
404 ZNF317 57693
Affinity Capture-MS Homo sapiens
405 RPL38 6169
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
406 API5 8539
Affinity Capture-MS Homo sapiens
407 SLC1A2  
Co-fractionation Homo sapiens
408 IL17B 27190
Affinity Capture-MS Homo sapiens
409 NEDD1 121441
Affinity Capture-MS Homo sapiens
410 GLI4  
Affinity Capture-MS Homo sapiens
411 RPS7 6201
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
412 RPL8 6132
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
413 TAF1C  
Affinity Capture-MS Homo sapiens
414 RPL28 6158
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
415 AR 367
Affinity Capture-MS Homo sapiens
416 RPL36AL 6166
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
417 RC3H1 149041
Affinity Capture-MS Homo sapiens
418 PURB 5814
Affinity Capture-MS Homo sapiens
419 DDX56  
Affinity Capture-MS Homo sapiens
420 HIST1H2AE 3012
Affinity Capture-MS Homo sapiens
421 BOP1 23246
Affinity Capture-MS Homo sapiens
422 GNL2 29889
Affinity Capture-MS Homo sapiens
423 UBE2H 7328
Affinity Capture-MS Homo sapiens
424 RPS12 6206
Co-fractionation Homo sapiens
425 RIT1 6016
Negative Genetic Homo sapiens
426 UTP18  
Affinity Capture-MS Homo sapiens
427 ZNF16  
Affinity Capture-MS Homo sapiens
428 CDC42BPB 9578
Affinity Capture-MS Homo sapiens
429 COIL  
Proximity Label-MS Homo sapiens
430 RPS3A 6189
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
431 WWP1 11059
Affinity Capture-MS Homo sapiens
432 RPL30 6156
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
433 PPIE 10450
Affinity Capture-MS Homo sapiens
434 ZNF324B  
Affinity Capture-MS Homo sapiens
435 RPL13A 23521
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
436 RPL37A 6168
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
437 DHX8 1659
Affinity Capture-MS Homo sapiens
438 HSPA1L 3305
Co-fractionation Homo sapiens
439 RPL10 6134
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
440 RPL15 6138
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
441 DNAJC25 548645
Affinity Capture-MS Homo sapiens
442 DHX57 90957
Affinity Capture-MS Homo sapiens
443 MRPL52  
Affinity Capture-MS Homo sapiens
444 ZBTB1  
Affinity Capture-MS Homo sapiens
445 DNAJC15  
Affinity Capture-MS Homo sapiens
446 SF3B2 10992
Affinity Capture-MS Homo sapiens
447 PPP1CC 5501
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
448 TOP2A 7153
Affinity Capture-MS Homo sapiens
449 RPS20 6224
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
450 PABPC4L 132430
Affinity Capture-MS Homo sapiens
451 TRIP12 9320
Affinity Capture-MS Homo sapiens
452 COPS5 10987
Affinity Capture-MS Homo sapiens
453 FBXW7  
Affinity Capture-MS Homo sapiens
454 RPL24 6152
Co-fractionation Homo sapiens
455 WDR12 55759
Affinity Capture-MS Homo sapiens
456 H2AFY2 55506
Affinity Capture-MS Homo sapiens
457 MRPS26 64949
Affinity Capture-MS Homo sapiens
458 ADARB1 104
Affinity Capture-MS Homo sapiens
459 TTF1  
Affinity Capture-MS Homo sapiens
460 STAU2 27067
Affinity Capture-MS Homo sapiens
461 PRKRA 8575
Affinity Capture-MS Homo sapiens
462 DDX51  
Affinity Capture-MS Homo sapiens
463 DNAJC16  
Affinity Capture-MS Homo sapiens
464 EED  
Affinity Capture-MS Homo sapiens
465 SRP68 6730
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
466 NOC3L 64318
Affinity Capture-MS Homo sapiens
467 RRP8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
468 RAB35 11021
Proximity Label-MS Homo sapiens
469 MYCN  
Affinity Capture-MS Homo sapiens
470 MAK16  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
471 KRI1  
Affinity Capture-MS Homo sapiens
472 CTCF  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
473 RPS26 6231
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
474 MRPL13  
Affinity Capture-MS Homo sapiens
475 SRP9 6726
Affinity Capture-MS Homo sapiens
476 ZKSCAN8  
Affinity Capture-MS Homo sapiens
477 CENPH  
Affinity Capture-MS Homo sapiens
478 RB1CC1 9821
Affinity Capture-MS Homo sapiens
479 STAU1 6780
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
480 SRSF6 6431
Affinity Capture-MS Homo sapiens
481 ZNF22  
Affinity Capture-MS Homo sapiens
482 NOC2L 26155
Affinity Capture-MS Homo sapiens
483 VCP 7415
Affinity Capture-MS Homo sapiens
484 SMAD3 4088
Affinity Capture-MS Homo sapiens
485 SUMO2 6613
Reconstituted Complex Homo sapiens
486 DICER1  
Affinity Capture-MS Homo sapiens
487 RPL27A 6157
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
488 PML 5371
Affinity Capture-MS Homo sapiens
489 BRD4 23476
Affinity Capture-MS Homo sapiens
490 ELOVL5 60481
Proximity Label-MS Homo sapiens
491 MRPS14  
Affinity Capture-MS Homo sapiens
492 FGF13  
Affinity Capture-MS Homo sapiens
493 GLTSCR2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
494 ST13 6767
Cross-Linking-MS (XL-MS) Homo sapiens
495 RPF1  
Affinity Capture-MS Homo sapiens
496 CCDC59  
Affinity Capture-MS Homo sapiens
497 RBM5  
Affinity Capture-MS Homo sapiens
498 DDX6 1656
Affinity Capture-MS Homo sapiens
499 BMS1  
Affinity Capture-MS Homo sapiens
500 PRPF4B 8899
Affinity Capture-MS Homo sapiens
501 RPLP2 6181
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
502 FANCD2  
Affinity Capture-MS Homo sapiens
503 RPL23 9349
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
504 PANX1 24145
Proximity Label-MS Homo sapiens
505 DNAJC2 27000
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
506 RPL35 11224
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
507 NAT10 55226
Affinity Capture-MS Homo sapiens
508 CTNNB1 1499
Affinity Capture-MS Homo sapiens
509 SRSF1 6426
Affinity Capture-MS Homo sapiens
510 RPS6 6194
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
511 RPL7 6129
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
512 ZC3H10  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
513 AURKB 9212
Affinity Capture-MS Homo sapiens
514 MRPL1  
Affinity Capture-MS Homo sapiens
515 PSTPIP1 9051
Affinity Capture-MS Homo sapiens
516 MAP7D1 55700
Affinity Capture-MS Homo sapiens
517 DKC1 1736
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
518 DHX30 22907
Affinity Capture-MS Homo sapiens
519 INO80B 83444
Affinity Capture-MS Homo sapiens
520 BMP4 652
Affinity Capture-MS Homo sapiens
521 ZC3H3  
Affinity Capture-MS Homo sapiens
522 C9orf72  
Affinity Capture-MS Homo sapiens
523 CCDC8  
Affinity Capture-MS Homo sapiens
524 RRP15  
Affinity Capture-MS Homo sapiens
525 YTHDC2 64848
Affinity Capture-MS Homo sapiens
526 ARRB2 409
Affinity Capture-MS Homo sapiens
527 SIRT6  
Affinity Capture-MS Homo sapiens
528 MRPS9 64965
Affinity Capture-MS Homo sapiens
529 GAR1 54433
Affinity Capture-MS Homo sapiens
530 TUBG1 7283
Affinity Capture-MS Homo sapiens
531 MINA 84864
Affinity Capture-MS Homo sapiens
532 NOL10  
Affinity Capture-MS Homo sapiens
533 HECTD3 79654
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
534 ZNF746  
Affinity Capture-MS Homo sapiens
535 CUL5 8065
Affinity Capture-MS Homo sapiens
536 DGCR8  
Affinity Capture-MS Homo sapiens
537 SMNDC1  
Affinity Capture-MS Homo sapiens
538 ZNF48  
Affinity Capture-MS Homo sapiens
539 RPS15 6209
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
540 SRP72 6731
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
541 NSA2  
Affinity Capture-MS Homo sapiens
542 EIF4A3 9775
Affinity Capture-MS Homo sapiens
543 ROR2 4920
Cross-Linking-MS (XL-MS) Homo sapiens
544 RBFOX2 23543
Two-hybrid Homo sapiens
545 RPS23 6228
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
546 ARRB1 408
Affinity Capture-MS Homo sapiens
547 TRIP4 9325
Affinity Capture-MS Homo sapiens
548 MRPL46  
Affinity Capture-MS Homo sapiens
549 RPS8 6202
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
550 GRSF1 2926
Proximity Label-MS Homo sapiens
551 ZNF629 23361
Affinity Capture-MS Homo sapiens
552 DNAJC1 64215
Affinity Capture-MS Homo sapiens
553 HNRNPU 3192
Affinity Capture-MS Homo sapiens
554 GNB2L1 10399
Affinity Capture-MS Homo sapiens
555 MRPS18A  
Affinity Capture-MS Homo sapiens
556 MRPL32 64983
Affinity Capture-MS Homo sapiens
557 RPL17 6139
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
558 CDC5L 988
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which RPL3 is involved
PathwayEvidenceSource
Axon guidance IEA Reactome
Cap-dependent Translation Initiation TAS Reactome
Cellular response to starvation IEA Reactome
Cellular responses to stimuli IEA Reactome
Cellular responses to stress IEA Reactome
Developmental Biology IEA Reactome
Disease TAS Reactome
Eukaryotic Translation Elongation IEA Reactome
Eukaryotic Translation Initiation TAS Reactome
Eukaryotic Translation Termination IEA Reactome
Formation of a pool of free 40S subunits TAS Reactome
GTP hydrolysis and joining of the 60S ribosomal subunit TAS Reactome
Infectious disease TAS Reactome
Influenza Infection TAS Reactome
Influenza Viral RNA Transcription and Replication TAS Reactome
L13a-mediated translational silencing of Ceruloplasmin expression TAS Reactome
Major pathway of rRNA processing in the nucleolus and cytosol TAS Reactome
Metabolism IEA Reactome
Metabolism of amino acids and derivatives IEA Reactome
Metabolism of proteins TAS Reactome
Metabolism of proteins IEA Reactome
Metabolism of RNA TAS Reactome
Nervous system development IEA Reactome
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) TAS Reactome
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) TAS Reactome
Nonsense-Mediated Decay (NMD) TAS Reactome
Peptide chain elongation IEA Reactome
Regulation of expression of SLITs and ROBOs IEA Reactome
Response of EIF2AK4 (GCN2) to amino acid deficiency IEA Reactome
rRNA processing TAS Reactome
rRNA processing in the nucleus and cytosol TAS Reactome
Selenoamino acid metabolism IEA Reactome
Selenocysteine synthesis IEA Reactome
Signaling by ROBO receptors IEA Reactome
SRP-dependent cotranslational protein targeting to membrane IEA Reactome
SRP-dependent cotranslational protein targeting to membrane TAS Reactome
Translation TAS Reactome
Translation IEA Reactome
Viral Infection Pathways TAS Reactome
Viral mRNA Translation TAS Reactome





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