Gene description for RPL4
Gene name ribosomal protein L4
Gene symbol RPL4
Other names/aliases L4
Species Homo sapiens
 Database cross references - RPL4
ExoCarta ExoCarta_6124
Vesiclepedia VP_6124
Entrez Gene 6124
HGNC 10353
MIM 180479
UniProt P36578  
 RPL4 identified in sEVs derived from the following tissue/cell type
B cells 20458337    
B cells 20458337    
B cells 20458337    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Colorectal cancer cells 25890246    
Colorectal cancer cells 34887515    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Foreskin fibroblasts 34108659    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Hepatocellular carcinoma cells 26054723    
Hepatocellular carcinoma cells 26054723    
Hepatocytes 26054723    
Lymphoma cells 34108659    
Mammary cancer-associated fibroblasts 34108659    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Mesenchymal stem cells 36408942    
Monocytic leukemia cells 34108659    
Neuroblastoma cells 25944692    
Normal mammary epithelial cells 34108659    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pluripotent stem cells 34108659    
Prostate cancer cells 25844599    
Prostate cancer cells 25844599    
T lymphocytes 34108659    
Thymus 23844026    
 Gene ontology annotations for RPL4
Molecular Function
    RNA binding GO:0003723 HDA
    RNA binding GO:0003723 IBA
    structural constituent of ribosome GO:0003735 IBA
    structural constituent of ribosome GO:0003735 IDA
    structural constituent of ribosome GO:0003735 NAS
    protein binding GO:0005515 IPI
Biological Process
    cytoplasmic translation GO:0002181 IC
    cytoplasmic translation GO:0002181 NAS
    translation GO:0006412 NAS
Subcellular Localization
    nucleus GO:0005634 HDA
    nucleus GO:0005634 IDA
    nucleolus GO:0005730 HDA
    cytoplasm GO:0005737 HDA
    cytoplasm GO:0005737 NAS
    rough endoplasmic reticulum GO:0005791 IDA
    cytosol GO:0005829 TAS
    focal adhesion GO:0005925 HDA
    membrane GO:0016020 HDA
    cytosolic large ribosomal subunit GO:0022625 HDA
    cytosolic large ribosomal subunit GO:0022625 IBA
    cytosolic large ribosomal subunit GO:0022625 IDA
    cytosolic large ribosomal subunit GO:0022625 IPI
    cytosolic ribosome GO:0022626 IDA
    extracellular exosome GO:0070062 HDA
    ribonucleoprotein complex GO:1990904 IDA
 Experiment description of studies that identified RPL4 in sEVs
1
Experiment ID 79
MISEV standards
✘ Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 1
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
2
Experiment ID 80
MISEV standards
✘ Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis -Sample 2
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
3
Experiment ID 81
MISEV standards
✘ Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 3
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
4
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
6
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
7
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
8
Experiment ID 412
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MCF7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
9
Experiment ID 414
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
10
Experiment ID 426
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
11
Experiment ID 427
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
12
Experiment ID 494
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD151|CD63|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Osteoarthritic cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
13
Experiment ID 496
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Healthy cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
14
Experiment ID 497
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
15
Experiment ID 498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
16
Experiment ID 282
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘ Negative markers
✔
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Ultracentrifugation - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
17
Experiment ID 283
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘ Negative markers
✔
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Ultracentrifugation - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
18
Experiment ID 285
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘ Negative markers
✔
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Sequential centrifugal ultrafiltration - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Sequential centrifugal ultrafiltration
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
19
Experiment ID 286
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘ Negative markers
✔
DLS
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25890246    
Organism Homo sapiens
Experiment description Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors "Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name Methods
Publication year 2015
Sample Colorectal cancer cells
Sample name LIM1863 - Sequential centrifugal ultrafiltration - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Sequential centrifugal ultrafiltration
Centrifugal concentration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
20
Experiment ID 1203
MISEV standards
✔
EM
Biophysical techniques
✔
SDCBP|FLOT1|CD9|CD81|CD63|EPCAM|GAPDH|LAMP1|TFRC|CD151|CD82|LAMP2|RAB35|TSG101|FLOT2|RAB5B|ICAM1|RAB5A
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 34887515    
Organism Homo sapiens
Experiment description Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets
Authors "Zhang Q, Jeppesen DK, Higginbotham JN, Graves-Deal R, Trinh VQ, Ramirez MA, Sohn Y, Neininger AC, Taneja N, McKinley ET, Niitsu H, Cao Z, Evans R, Glass SE, Ray KC, Fissell WH, Hill S, Rose KL, Huh WJ, Washington MK, Ayers GD, Burnette DT, Sharma S, Rome LH, Franklin JL, Lee YA, Liu Q, Coffey RJ."
Journal name Nat Cell Biol
Publication year 2021
Sample Colorectal cancer cells
Sample name DiFi
Isolation/purification methods Differential centrifugation
Filtration
Centrifugal ultrafiltration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
miRNA
Methods used in the study Western blotting
Mass spectrometry
RNA sequencing
21
Experiment ID 407
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
22
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
23
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
24
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
25
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
26
Experiment ID 405
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Foreskin fibroblasts
Sample name BJ
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
27
Experiment ID 363
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
28
Experiment ID 364
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
29
Experiment ID 365
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
30
Experiment ID 235
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
31
Experiment ID 236
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name MHCC97L
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
32
Experiment ID 237
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
33
Experiment ID 417
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Lymphoma cells
Sample name Raji
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
34
Experiment ID 411
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Mammary cancer-associated fibroblasts
Sample name mCAF
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
35
Experiment ID 254
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name MNT-1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
36
Experiment ID 255
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name G1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
37
Experiment ID 256
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 501mel
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
38
Experiment ID 257
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name Daju
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
39
Experiment ID 258
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name SKMEL28
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
40
Experiment ID 259
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name A375M
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
41
Experiment ID 260
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 1205Lu
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
42
Experiment ID 488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
43
Experiment ID 418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
44
Experiment ID 418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
45
Experiment ID 224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25944692    
Organism Homo sapiens
Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name Oncotarget
Publication year 2015
Sample Neuroblastoma cells
Sample name SH-SY5Y
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
46
Experiment ID 413
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Normal mammary epithelial cells
Sample name MCF10A
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
47
Experiment ID 211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
48
Experiment ID 212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
49
Experiment ID 406
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name BxPC3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
50
Experiment ID 415
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
51
Experiment ID 434
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
52
Experiment ID 435
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
53
Experiment ID 408
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPDE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
54
Experiment ID 409
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPNE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
55
Experiment ID 416
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pluripotent stem cells
Sample name PSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
56
Experiment ID 275
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|RAB5A|CD9|CD82|CD63|CD81
Enriched markers
✔
AIF
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25844599    
Organism Homo sapiens
Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Authors "Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, Ullen A, Yachnin J, Nilsson S, Panaretakis T."
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - Docetaxel sensitive
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.12-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry/Flow cytometry/Western blotting
57
Experiment ID 274
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|RAB5A|CD9|CD82|CD63|CD81
Enriched markers
✔
AIF
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25844599    
Organism Homo sapiens
Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Authors "Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, Ullen A, Yachnin J, Nilsson S, Panaretakis T."
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - Docetaxel resistant
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.18 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Flow cytometry
Western blotting
58
Experiment ID 410
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample T lymphocytes
Sample name Jurkat
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
59
Experiment ID 217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RPL4
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 EIF3A 8661
Affinity Capture-MS Homo sapiens
2 TRMT1L 81627
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
3 UBL4A 8266
Affinity Capture-MS Homo sapiens
4 ZBTB11  
Affinity Capture-MS Homo sapiens
5 AATF  
Affinity Capture-MS Homo sapiens
6 MCF2L  
Cross-Linking-MS (XL-MS) Homo sapiens
7 ZNF346  
Affinity Capture-MS Homo sapiens
8 RIN3  
Affinity Capture-MS Homo sapiens
9 SKI 6497
Affinity Capture-MS Homo sapiens
10 ZNF668  
Affinity Capture-MS Homo sapiens
11 CSNK1A1 1452
Affinity Capture-MS Homo sapiens
12 HIST1H2BH 8345
Cross-Linking-MS (XL-MS) Homo sapiens
13 NMNAT1  
Affinity Capture-MS Homo sapiens
14 KIF20A 10112
Affinity Capture-MS Homo sapiens
15 CSNK2A1 1457
Affinity Capture-MS Homo sapiens
16 NHP2L1 4809
Co-fractionation Homo sapiens
17 SCAF4 57466
Affinity Capture-MS Homo sapiens
18 PRPF40A 55660
Reconstituted Complex Homo sapiens
19 SOX2  
Affinity Capture-MS Homo sapiens
20 APEX1 328
Affinity Capture-MS Homo sapiens
21 NOL8  
Affinity Capture-MS Homo sapiens
22 CENPU  
Affinity Capture-MS Homo sapiens
23 GPATCH4 54865
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
24 IGF2BP3 10643
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
25 WDR76  
Affinity Capture-MS Homo sapiens
26 DTX3  
Affinity Capture-MS Homo sapiens
27 DARS 1615
Affinity Capture-MS Homo sapiens
28 KIF23 9493
Affinity Capture-MS Homo sapiens
29 NDRG1 10397
Affinity Capture-MS Homo sapiens
30 PALM2-AKAP2 445815
Co-fractionation Homo sapiens
31 METAP2 10988
Affinity Capture-MS Homo sapiens
32 ERC1 23085
Cross-Linking-MS (XL-MS) Homo sapiens
33 FBL 2091
Co-fractionation Homo sapiens
34 RPS9 6203
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
35 GSPT1 2935
Affinity Capture-MS Homo sapiens
36 POLRMT 5442
Affinity Capture-MS Homo sapiens
37 CENPQ  
Affinity Capture-MS Homo sapiens
38 SFN 2810
Affinity Capture-MS Homo sapiens
39 MECP2 4204
Affinity Capture-MS Homo sapiens
40 ARIH2 10425
Affinity Capture-MS Homo sapiens
41 RPS11 6205
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
42 RPL19 6143
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
43 KIF14 9928
Affinity Capture-MS Homo sapiens
44 SORBS1 10580
Two-hybrid Homo sapiens
45 EMC9  
Affinity Capture-MS Homo sapiens
46 CHMP4C 92421
Affinity Capture-MS Homo sapiens
47 CMAS 55907
Affinity Capture-MS Homo sapiens
48 TRIM7  
Affinity Capture-MS Homo sapiens
49 SRPK2 6733
Affinity Capture-MS Homo sapiens
50 TARBP2  
Affinity Capture-MS Homo sapiens
51 RRP9 9136
Affinity Capture-MS Homo sapiens
52 RBM4B  
Affinity Capture-MS Homo sapiens
53 DNAJB7  
Affinity Capture-MS Homo sapiens
54 RPL18A 6142
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
55 PABPC1 26986
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
56 Srp72  
Affinity Capture-MS Mus musculus
57 YAP1 10413
Affinity Capture-MS Homo sapiens
58 SRBD1  
Affinity Capture-MS Homo sapiens
59 TRIM21 6737
Affinity Capture-MS Homo sapiens
60 OGT 8473
Reconstituted Complex Homo sapiens
61 RPL31 6160
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
62 GTF3C2  
Affinity Capture-MS Homo sapiens
63 HECTD1 25831
Affinity Capture-MS Homo sapiens
64 CUL2 8453
Affinity Capture-MS Homo sapiens
65 RRP1B 23076
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
66 MAGEB2 4113
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
67 SND1 27044
Co-fractionation Homo sapiens
68 SEC61B 10952
Affinity Capture-MS Homo sapiens
69 SRPK1 6732
Affinity Capture-MS Homo sapiens
70 SLC25A5 292
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
71 CD3EAP  
Affinity Capture-MS Homo sapiens
72 SSR4 6748
Affinity Capture-MS Homo sapiens
73 CNBP 7555
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
74 ANLN 54443
Affinity Capture-MS Homo sapiens
75 EIF3G 8666
Affinity Capture-MS Homo sapiens
76 STK3 6788
Cross-Linking-MS (XL-MS) Homo sapiens
77 TMPO 7112
Affinity Capture-MS Homo sapiens
78 DNAJC21  
Affinity Capture-MS Homo sapiens
79 ABT1 29777
Affinity Capture-MS Homo sapiens
80 AHDC1  
Affinity Capture-MS Homo sapiens
81 APOE 348
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
82 SIRT7  
Affinity Capture-MS Homo sapiens
83 IFI16 3428
Affinity Capture-MS Homo sapiens
84 GRK5 2869
Affinity Capture-MS Homo sapiens
85 NPM3 10360
Affinity Capture-MS Homo sapiens
86 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
87 EBNA1BP2 10969
Affinity Capture-MS Homo sapiens
88 PAPD5 64282
Affinity Capture-MS Homo sapiens
89 NOM1  
Affinity Capture-MS Homo sapiens
90 RPL7L1 285855
Affinity Capture-MS Homo sapiens
91 NIP7 51388
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
92 FN1 2335
Affinity Capture-MS Homo sapiens
93 ZNF512  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
94 HIST1H1B 3009
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
95 EIF3CL 728689
Affinity Capture-MS Homo sapiens
96 PCBP1 5093
Affinity Capture-MS Homo sapiens
97 RPL17 6139
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
98 SPEN 23013
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
99 RPA3 6119
Proximity Label-MS Homo sapiens
100 MAGEB10  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
101 RPL35A 6165
Co-fractionation Homo sapiens
102 DAP3 7818
Affinity Capture-MS Homo sapiens
103 RPL27A 6157
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
104 NCLN 56926
Affinity Capture-MS Homo sapiens
105 HSPA4 3308
Cross-Linking-MS (XL-MS) Homo sapiens
106 HIST1H1A 3024
Affinity Capture-MS Homo sapiens
107 PATZ1  
Affinity Capture-MS Homo sapiens
108 Rpl35 66489
Affinity Capture-MS Mus musculus
109 CSDE1 7812
Cross-Linking-MS (XL-MS) Homo sapiens
110 RPS15A 6210
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
111 GNL3 26354
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Affinity Capture-MS Homo sapiens
112 NGDN  
Affinity Capture-MS Homo sapiens
113 RPS16 6217
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
114 U2SURP 23350
Affinity Capture-MS Homo sapiens
115 MIEF1  
Cross-Linking-MS (XL-MS) Homo sapiens
116 YBX1 4904
Affinity Capture-MS Homo sapiens
117 DNAJC28  
Affinity Capture-MS Homo sapiens
118 RPS27A 6233
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
119 C8orf33 65265
Affinity Capture-MS Homo sapiens
120 IARS 3376
Affinity Capture-MS Homo sapiens
121 RRS1 23212
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
122 ZEB1  
Affinity Capture-MS Homo sapiens
123 CDC37 11140
Co-fractionation Homo sapiens
124 TBL3 10607
Affinity Capture-MS Homo sapiens
125 G3BP2 9908
Affinity Capture-MS Homo sapiens
126 TAF1D  
Affinity Capture-MS Homo sapiens
127 TARS 6897
Co-fractionation Homo sapiens
128 PPP1R14C  
Cross-Linking-MS (XL-MS) Homo sapiens
129 KRR1 11103
Affinity Capture-MS Homo sapiens
130 MAP1LC3A 84557
Affinity Capture-MS Homo sapiens
131 PIN1 5300
Reconstituted Complex Homo sapiens
132 RPS24 6229
Co-fractionation Homo sapiens
133 NCL 4691
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
134 MRPS33  
Affinity Capture-MS Homo sapiens
135 RPL23AP32 56969
Affinity Capture-MS Homo sapiens
136 C14orf169  
Affinity Capture-MS Homo sapiens
137 PTGES3 10728
Co-fractionation Homo sapiens
138 RPL23A 6147
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
139 MRPL55  
Affinity Capture-MS Homo sapiens
140 PURA 5813
Affinity Capture-MS Homo sapiens
141 LUC7L 55692
Affinity Capture-MS Homo sapiens
142 NVL  
Affinity Capture-MS Homo sapiens
143 HERC5 51191
Affinity Capture-MS Homo sapiens
144 SEC61A1 29927
Affinity Capture-MS Homo sapiens
145 EIF4G3 8672
Affinity Capture-MS Homo sapiens
146 ILKAP 80895
Cross-Linking-MS (XL-MS) Homo sapiens
147 SPRTN  
Affinity Capture-MS Homo sapiens
148 WDR3  
Affinity Capture-MS Homo sapiens
149 EIF2S3 1968
Affinity Capture-MS Homo sapiens
150 KIAA0020 9933
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
151 RPS17 6218
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
152 RSL24D1  
Affinity Capture-MS Homo sapiens
153 TARDBP 23435
Affinity Capture-MS Homo sapiens
154 BTF3 689
Affinity Capture-MS Homo sapiens
155 VPRBP 9730
Affinity Capture-MS Homo sapiens
156 URB1 9875
Affinity Capture-MS Homo sapiens
157 NOP56 10528
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
158 SRPR 6734
Affinity Capture-MS Homo sapiens
159 ZNF638 27332
Affinity Capture-MS Homo sapiens
160 NUMA1 4926
Cross-Linking-MS (XL-MS) Homo sapiens
161 RPL14 9045
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
162 URB2  
Affinity Capture-MS Homo sapiens
163 CAND1 55832
Affinity Capture-MS Homo sapiens
164 RSBN1  
Affinity Capture-MS Homo sapiens
165 PWP2 5822
Affinity Capture-MS Homo sapiens
166 RPS3 6188
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
167 DNAJB6 10049
Affinity Capture-MS Homo sapiens
168 RPS18 6222
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
169 ZNF397  
Affinity Capture-MS Homo sapiens
170 ZNF189  
Affinity Capture-MS Homo sapiens
171 RNPS1 10921
Co-fractionation Homo sapiens
172 PRR11  
Affinity Capture-MS Homo sapiens
173 B3GNT2 10678
Affinity Capture-MS Homo sapiens
174 HSP90AA1 3320
Co-fractionation Homo sapiens
175 NOLC1 9221
Co-fractionation Homo sapiens
176 H1FX 8971
Affinity Capture-MS Homo sapiens
177 COPS6 10980
Affinity Capture-MS Homo sapiens
178 RRP12 23223
Affinity Capture-MS Homo sapiens
179 PRC1 9055
Affinity Capture-MS Homo sapiens
180 NPM1 4869
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
181 RECQL4  
Affinity Capture-MS Homo sapiens
182 KRI1  
Affinity Capture-MS Homo sapiens
183 PAK1IP1  
Affinity Capture-MS Homo sapiens
184 VCAM1 7412
Affinity Capture-MS Homo sapiens
185 DDX6 1656
Affinity Capture-MS Homo sapiens
186 MRPS7 51081
Affinity Capture-MS Homo sapiens
187 NSD1  
Affinity Capture-MS Homo sapiens
188 POP1 10940
Affinity Capture-MS Homo sapiens
189 Eif3a 13669
Affinity Capture-MS Mus musculus
190 CUL1 8454
Affinity Capture-MS Homo sapiens
191 RBM42  
Affinity Capture-MS Homo sapiens
192 OASL 8638
Affinity Capture-MS Homo sapiens
193 RRP7A 27341
Affinity Capture-MS Homo sapiens
194 GAR1 54433
Affinity Capture-MS Homo sapiens
195 PES1 23481
Co-fractionation Homo sapiens
196 ATXN2 6311
Affinity Capture-MS Homo sapiens
197 IL32  
Two-hybrid Homo sapiens
198 MRPS35 60488
Affinity Capture-MS Homo sapiens
199 HIST2H2AB 317772
Affinity Capture-MS Homo sapiens
200 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
201 DDX21 9188
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
202 RBM28 55131
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
203 DRG1 4733
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
204 RPF2 84154
Affinity Capture-MS Homo sapiens
205 PSMD14 10213
Affinity Capture-MS Homo sapiens
206 SNRNP200 23020
Cross-Linking-MS (XL-MS) Homo sapiens
207 VRK1 7443
Affinity Capture-MS Homo sapiens
208 DDX10  
Affinity Capture-MS Homo sapiens
209 TUBA1C 84790
Co-fractionation Homo sapiens
210 NELFE 7936
Affinity Capture-MS Homo sapiens
211 CDK13 8621
Affinity Capture-MS Homo sapiens
212 NKRF 55922
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
213 REXO4  
Affinity Capture-MS Homo sapiens
214 BEND7 222389
Affinity Capture-MS Homo sapiens
215 NOMO3 408050
Affinity Capture-MS Homo sapiens
216 GTF3C1  
Affinity Capture-MS Homo sapiens
217 LYAR 55646
Affinity Capture-MS Homo sapiens
218 MAGOH 4116
Affinity Capture-MS Homo sapiens
219 RPLP0 6175
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
220 RPLP0P6 220717
Co-fractionation Homo sapiens
221 DDX27 55661
Affinity Capture-MS Homo sapiens
222 Ksr1  
Affinity Capture-MS Mus musculus
223 CYLD  
Affinity Capture-MS Homo sapiens
224 LOC101929876 101929876
Co-fractionation Homo sapiens
225 C7orf50 84310
Affinity Capture-MS Homo sapiens
226 KDF1  
Affinity Capture-MS Homo sapiens
227 RSL1D1 26156
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
228 FGFBP1 9982
Affinity Capture-MS Homo sapiens
229 CENPN  
Affinity Capture-MS Homo sapiens
230 PPAN-P2RY11  
Affinity Capture-MS Homo sapiens
231 RPL32 6161
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
232 HNRNPCL4 101060301
Affinity Capture-MS Homo sapiens
233 ZNF770 54989
Affinity Capture-MS Homo sapiens
234 RPS2 6187
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
235 XPO1 7514
Affinity Capture-MS Homo sapiens
236 EIF6 3692
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
237 RC3H2  
Affinity Capture-MS Homo sapiens
238 MRPS11  
Affinity Capture-MS Homo sapiens
239 SLC25A22  
Cross-Linking-MS (XL-MS) Homo sapiens
240 TAF1B  
Affinity Capture-MS Homo sapiens
241 SRSF5 6430
Affinity Capture-MS Homo sapiens
242 EGFR 1956
Affinity Capture-MS Homo sapiens
Negative Genetic Homo sapiens
243 FAM90A1  
Affinity Capture-MS Homo sapiens
244 FUS 2521
Affinity Capture-MS Homo sapiens
245 TFG 10342
Affinity Capture-MS Homo sapiens
246 ZCCHC7  
Affinity Capture-MS Homo sapiens
247 RPS27 6232
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
248 CEP250 11190
Affinity Capture-MS Homo sapiens
249 MAP2K3 5606
Affinity Capture-MS Homo sapiens
250 MYC  
Affinity Capture-MS Homo sapiens
251 BAG1 573
Affinity Capture-MS Homo sapiens
252 CEBPZ  
Affinity Capture-MS Homo sapiens
253 ZCCHC6 79670
Affinity Capture-MS Homo sapiens
254 NOL12 79159
Affinity Capture-MS Homo sapiens
255 GZF1  
Affinity Capture-MS Homo sapiens
256 EEF1A2 1917
Co-fractionation Homo sapiens
257 SART3 9733
Affinity Capture-MS Homo sapiens
258 DDRGK1 65992
Affinity Capture-MS Homo sapiens
259 NOP16 51491
Affinity Capture-MS Homo sapiens
260 ZNF845  
Affinity Capture-MS Homo sapiens
261 CCDC140  
Affinity Capture-MS Homo sapiens
262 MYB  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
263 RPL26 6154
Co-fractionation Homo sapiens
264 FTSJ3 117246
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
265 HUWE1 10075
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
266 EIF3H 8667
Affinity Capture-MS Homo sapiens
267 EEF1A1 1915
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
268 PA2G4 5036
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
269 RPL13 6137
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
270 SURF6  
Affinity Capture-MS Homo sapiens
271 RNF151  
Affinity Capture-MS Homo sapiens
272 Ewsr1 14030
Two-hybrid Mus musculus
273 ILF3 3609
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
274 TP53 7157
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
275 FOLR1 2348
Affinity Capture-MS Homo sapiens
276 PRRC2A 7916
Affinity Capture-MS Homo sapiens
277 FAM71E2  
Cross-Linking-MS (XL-MS) Homo sapiens
278 RPS12 6206
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
279 KNOP1 400506
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
280 RPS4X 6191
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
281 UTP23  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
282 CAPRIN1 4076
Affinity Capture-MS Homo sapiens
283 GNL1 2794
Affinity Capture-MS Homo sapiens
284 RPS5 6193
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
285 NIFK 84365
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
286 ESR1  
Affinity Capture-MS Homo sapiens
287 BAG5 9529
Affinity Capture-MS Homo sapiens
288 EIF3M 10480
Affinity Capture-MS Homo sapiens
289 TEFM  
Affinity Capture-MS Homo sapiens
290 RPL7A 6130
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
291 ARF1 375
Proximity Label-MS Homo sapiens
292 BCCIP 56647
Affinity Capture-MS Homo sapiens
293 GLYR1 84656
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
294 KRAS 3845
Affinity Capture-MS Homo sapiens
Negative Genetic Homo sapiens
295 DDX31  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
296 ATOH1  
Affinity Capture-MS Homo sapiens
297 TEX10 54881
Affinity Capture-MS Homo sapiens
298 PRMT1 3276
Affinity Capture-MS Homo sapiens
299 ZNF865  
Affinity Capture-MS Homo sapiens
300 MRPS9 64965
Affinity Capture-MS Homo sapiens
301 CUL4A 8451
Affinity Capture-MS Homo sapiens
302 MRPS27 23107
Affinity Capture-MS Homo sapiens
303 UBE2H 7328
Affinity Capture-MS Homo sapiens
304 SENP3 26168
Affinity Capture-MS Homo sapiens
305 RPL26L1 51121
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
306 NOP58 51602
Co-fractionation Homo sapiens
307 DNAJC8 22826
Affinity Capture-MS Homo sapiens
308 YWHAE 7531
Affinity Capture-MS Homo sapiens
309 CENPC  
Affinity Capture-MS Homo sapiens
310 RPS19 6223
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
311 SSB 6741
Affinity Capture-MS Homo sapiens
312 APBB1  
Reconstituted Complex Homo sapiens
313 L1RE1  
Affinity Capture-MS Homo sapiens
314 ATG13 9776
Affinity Capture-MS Homo sapiens
315 Rrp1b 72462
Affinity Capture-MS Mus musculus
316 CAPZB 832
Affinity Capture-MS Homo sapiens
317 RPL10A 4736
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
318 LLPH  
Affinity Capture-MS Homo sapiens
319 WDR74 54663
Affinity Capture-MS Homo sapiens
320 CENPV 201161
Affinity Capture-MS Homo sapiens
321 CCDC137  
Affinity Capture-MS Homo sapiens
322 MPHOSPH10 10199
Affinity Capture-MS Homo sapiens
323 CDK12 51755
Affinity Capture-MS Homo sapiens
324 TRIM56 81844
Affinity Capture-MS Homo sapiens
325 LSG1  
Affinity Capture-MS Homo sapiens
326 SSR1 6745
Affinity Capture-MS Homo sapiens
327 RC3H1 149041
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
328 ITGA4 3676
Affinity Capture-MS Homo sapiens
329 RPL29 6159
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
330 DDX18 8886
Affinity Capture-MS Homo sapiens
331 FAM46D  
Affinity Capture-MS Homo sapiens
332 MTDH 92140
Affinity Capture-MS Homo sapiens
333 FAM111A 63901
Affinity Capture-MS Homo sapiens
334 TFCP2 7024
Affinity Capture-MS Homo sapiens
335 PABPC4 8761
Affinity Capture-MS Homo sapiens
336 RBM8A 9939
Affinity Capture-MS Homo sapiens
337 RBM19 9904
Affinity Capture-MS Homo sapiens
338 FOXP1 27086
Protein-RNA Homo sapiens
339 LIN28A  
Affinity Capture-MS Homo sapiens
340 BRIX1 55299
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
341 RPS4Y2 140032
Affinity Capture-MS Homo sapiens
342 NF2 4771
Affinity Capture-MS Homo sapiens
343 RPL27 6155
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
344 MRPS25 64432
Affinity Capture-MS Homo sapiens
345 EIF3K 27335
Affinity Capture-MS Homo sapiens
346 NOP2 4839
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
347 GJA1 2697
Affinity Capture-MS Homo sapiens
348 RPL9 6133
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
349 SRRM1 10250
Affinity Capture-MS Homo sapiens
350 CUL4B 8450
Affinity Capture-MS Homo sapiens
351 PARK2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
352 NOL6 65083
Affinity Capture-MS Homo sapiens
353 COPE 11316
Affinity Capture-MS Homo sapiens
354 RPS10 6204
Co-fractionation Homo sapiens
355 XRN1 54464
Affinity Capture-MS Homo sapiens
356 ITGB3BP  
Affinity Capture-MS Homo sapiens
357 GTPBP10  
Affinity Capture-MS Homo sapiens
358 RPL5 6125
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
Co-fractionation Homo sapiens
359 CHMP4B 128866
Affinity Capture-MS Homo sapiens
360 NTRK1 4914
Affinity Capture-MS Homo sapiens
361 HIST1H1E 3008
Affinity Capture-MS Homo sapiens
362 ZNF324  
Affinity Capture-MS Homo sapiens
363 RPL36 25873
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
364 C10orf2 56652
Affinity Capture-MS Homo sapiens
365 RPA4  
Proximity Label-MS Homo sapiens
366 RPLP1 6176
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
367 DHX9 1660
Affinity Capture-MS Homo sapiens
368 ENY2 56943
Affinity Capture-MS Homo sapiens
369 UQCRH 7388
Co-fractionation Homo sapiens
370 MYBBP1A 10514
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
371 DNTTIP2  
Affinity Capture-MS Homo sapiens
372 HMGB2 3148
Affinity Capture-MS Homo sapiens
373 RPL11 6135
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
374 Brwd3  
Affinity Capture-MS Mus musculus
375 SLX4  
Affinity Capture-MS Homo sapiens
376 TNFAIP8L1  
Affinity Capture-MS Homo sapiens
377 SPATS2L 26010
Affinity Capture-MS Homo sapiens
378 METTL14  
Affinity Capture-MS Homo sapiens
379 CHERP 10523
Affinity Capture-MS Homo sapiens
380 ZNF320  
Affinity Capture-MS Homo sapiens
381 ECT2 1894
Affinity Capture-MS Homo sapiens
382 EXOSC10 5394
Affinity Capture-MS Homo sapiens
383 EEF2 1938
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
384 WHSC1 7468
Affinity Capture-MS Homo sapiens
385 HSP90AB1 3326
Co-fractionation Homo sapiens
386 ARNT 405
Affinity Capture-MS Homo sapiens
387 RPL21 6144
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
388 FBXO6 26270
Affinity Capture-MS Homo sapiens
389 DHX30 22907
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
390 PDCD11 22984
Affinity Capture-MS Homo sapiens
391 BUD13  
Affinity Capture-MS Homo sapiens
392 NCAPH 23397
Affinity Capture-MS Homo sapiens
393 PSPC1 55269
Affinity Capture-MS Homo sapiens
394 RPS13 6207
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
395 PHF6  
Affinity Capture-MS Homo sapiens
396 RPS14 6208
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
397 INO80  
Affinity Capture-MS Homo sapiens
398 RPL12 6136
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
399 RPL22 6146
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
400 HP1BP3 50809
Affinity Capture-MS Homo sapiens
401 ENO2 2026
Cross-Linking-MS (XL-MS) Homo sapiens
402 DHFRL1  
Proximity Label-MS Homo sapiens
403 RPL18 6141
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
404 RNF2  
Affinity Capture-MS Homo sapiens
405 KTN1 3895
Affinity Capture-MS Homo sapiens
406 ZC3HAV1 56829
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
407 Eif3e 16341
Affinity Capture-MS Mus musculus
408 TAF1A  
Affinity Capture-MS Homo sapiens
409 C3orf17  
Affinity Capture-MS Homo sapiens
410 ZNF574  
Affinity Capture-MS Homo sapiens
411 EIF2S1 1965
Affinity Capture-MS Homo sapiens
412 DDX50 79009
Affinity Capture-MS Homo sapiens
413 RPL37 6167
Co-fractionation Homo sapiens
414 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
415 RPL3L 6123
Co-fractionation Homo sapiens
416 RPS25 6230
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
417 EPB41L4B 54566
Affinity Capture-MS Homo sapiens
418 RPL6 6128
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
419 PRDM15  
Affinity Capture-MS Homo sapiens
420 RPS21 6227
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
421 ICT1 3396
Co-fractionation Homo sapiens
422 RAB10 10890
Cross-Linking-MS (XL-MS) Homo sapiens
423 DDX3X 1654
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
424 USP36  
Affinity Capture-MS Homo sapiens
425 LENG8  
Affinity Capture-MS Homo sapiens
426 G3BP1 10146
Affinity Capture-MS Homo sapiens
427 CENPO  
Affinity Capture-MS Homo sapiens
428 MRPS10 55173
Affinity Capture-MS Homo sapiens
429 HDAC5 10014
Affinity Capture-MS Homo sapiens
430 RPL34 6164
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
431 PDZD8 118987
Affinity Capture-MS Homo sapiens
432 UFL1 23376
Affinity Capture-MS Homo sapiens
433 ZNF317 57693
Affinity Capture-MS Homo sapiens
434 TRIM37  
Proximity Label-MS Homo sapiens
435 RPL38 6169
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
436 API5 8539
Affinity Capture-MS Homo sapiens
437 GTPBP4 23560
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
438 IL17B 27190
Affinity Capture-MS Homo sapiens
439 RPS7 6201
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
440 RPL8 6132
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
441 ANKRD11 29123
Cross-Linking-MS (XL-MS) Homo sapiens
442 TAF1C  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
443 RPL28 6158
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
444 RPS27L 51065
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
445 SERBP1 26135
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
446 NUFIP2 57532
Affinity Capture-MS Homo sapiens
447 RPL36AL 6166
Affinity Capture-MS Homo sapiens
448 RBM34  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
449 PURB 5814
Affinity Capture-MS Homo sapiens
450 GTPBP2 54676
Affinity Capture-MS Homo sapiens
451 DDX56  
Affinity Capture-MS Homo sapiens
452 EIF5 1983
Affinity Capture-MS Homo sapiens
453 UBA52 7311
Co-fractionation Homo sapiens
454 GNL2 29889
Affinity Capture-MS Homo sapiens
455 RPSA 3921
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
456 SRP19 6728
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
457 RIT1 6016
Negative Genetic Homo sapiens
458 GNAT1 2779
Cross-Linking-MS (XL-MS) Homo sapiens
459 DDX24 57062
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
460 ZNF326 284695
Affinity Capture-MS Homo sapiens
461 RPS3A 6189
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
462 RPL30 6156
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
463 PPIE 10450
Affinity Capture-MS Homo sapiens
464 RPL13A 23521
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
465 RPL37A 6168
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
466 RPL10 6134
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
467 RPL15 6138
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
468 DNAJC25 548645
Affinity Capture-MS Homo sapiens
469 DHX57 90957
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
470 MRPL52  
Affinity Capture-MS Homo sapiens
471 CCDC124 115098
Affinity Capture-MS Homo sapiens
472 DNAJC15  
Affinity Capture-MS Homo sapiens
473 WDR36 134430
Affinity Capture-MS Homo sapiens
474 ILF2 3608
Co-fractionation Homo sapiens
475 GSK3A 2931
Affinity Capture-MS Homo sapiens
476 PPP1CC 5501
Affinity Capture-MS Homo sapiens
477 COPS5 10987
Affinity Capture-MS Homo sapiens
478 SRP54 6729
Affinity Capture-MS Homo sapiens
479 TOP2A 7153
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
480 RPS20 6224
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
481 TPM3 7170
Cross-Linking-MS (XL-MS) Homo sapiens
482 PCK1 5105
Affinity Capture-MS Homo sapiens
483 TRIP12 9320
Affinity Capture-MS Homo sapiens
484 MRPS5 64969
Affinity Capture-MS Homo sapiens
485 FBXW7  
Affinity Capture-MS Homo sapiens
486 RPL24 6152
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
487 MRPS24 64951
Affinity Capture-MS Homo sapiens
488 RPS8 6202
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
489 WDR12 55759
Co-fractionation Homo sapiens
490 H2AFY2 55506
Affinity Capture-MS Homo sapiens
491 ABCE1 6059
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
492 ADARB1 104
Affinity Capture-MS Homo sapiens
493 TTF1  
Affinity Capture-MS Homo sapiens
494 PRKRA 8575
Affinity Capture-MS Homo sapiens
495 DDX51  
Affinity Capture-MS Homo sapiens
496 DNAJC16  
Affinity Capture-MS Homo sapiens
497 BRD4 23476
Cross-Linking-MS (XL-MS) Homo sapiens
498 SRP68 6730
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
499 NOC3L 64318
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
500 RRP8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
501 MYCN  
Affinity Capture-MS Homo sapiens
502 MAK16  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
503 RLIM 51132
Affinity Capture-MS Homo sapiens
504 CTCF  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
505 RPS26 6231
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
506 FCF1  
Affinity Capture-MS Homo sapiens
507 MRPL13  
Affinity Capture-MS Homo sapiens
508 GEMIN5 25929
Cross-Linking-MS (XL-MS) Homo sapiens
509 SRP9 6726
Affinity Capture-MS Homo sapiens
510 MRPS26 64949
Affinity Capture-MS Homo sapiens
511 CASZ1  
Cross-Linking-MS (XL-MS) Homo sapiens
512 RB1CC1 9821
Affinity Capture-MS Homo sapiens
513 RPS28 6234
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
514 MRPS34 65993
Affinity Capture-MS Homo sapiens
515 STAU1 6780
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
516 SRSF6 6431
Affinity Capture-MS Homo sapiens
517 HTT 3064
Affinity Capture-Luminescence Homo sapiens
Affinity Capture-Luminescence Homo sapiens
518 ZNF22  
Affinity Capture-MS Homo sapiens
519 PTCD3 55037
Affinity Capture-MS Homo sapiens
520 NOC2L 26155
Affinity Capture-MS Homo sapiens
521 SMAD3 4088
Affinity Capture-MS Homo sapiens
522 SUMO2 6613
Reconstituted Complex Homo sapiens
523 SF3B6 51639
Two-hybrid Homo sapiens
524 DDX54 79039
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
525 PML 5371
Affinity Capture-MS Homo sapiens
526 ZFC3H1 196441
Affinity Capture-MS Homo sapiens
527 ZNF107  
Affinity Capture-MS Homo sapiens
528 ELOVL5 60481
Proximity Label-MS Homo sapiens
529 ATP5B 506
Co-fractionation Homo sapiens
530 GLTSCR2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
531 RPF1  
Affinity Capture-MS Homo sapiens
532 SEC63 11231
Affinity Capture-MS Homo sapiens
533 GAN 8139
Affinity Capture-MS Homo sapiens
534 BMS1  
Affinity Capture-MS Homo sapiens
535 PRPF4B 8899
Affinity Capture-MS Homo sapiens
536 RPLP2 6181
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
537 FANCD2  
Affinity Capture-MS Homo sapiens
538 TRIM31  
Affinity Capture-MS Homo sapiens
539 CLK3  
Cross-Linking-MS (XL-MS) Homo sapiens
540 PANX1 24145
Proximity Label-MS Homo sapiens
541 MRPL35  
Affinity Capture-MS Homo sapiens
542 DNAJC2 27000
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
543 RPL35 11224
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
544 TSPYL2  
Affinity Capture-MS Homo sapiens
545 NAT10 55226
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
546 CTNNB1 1499
Affinity Capture-MS Homo sapiens
547 SRSF1 6426
Affinity Capture-MS Homo sapiens
548 Rrbp1  
Affinity Capture-MS Mus musculus
549 RPL3 6122
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
550 MAP3K1 4214
Affinity Capture-MS Homo sapiens
551 BBX 56987
Affinity Capture-MS Homo sapiens
552 RPL7 6129
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
553 SART1 9092
Cross-Linking-MS (XL-MS) Homo sapiens
554 AURKB 9212
Affinity Capture-MS Homo sapiens
555 DCUN1D1 54165
Affinity Capture-MS Homo sapiens
556 DKC1 1736
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
557 INO80B 83444
Affinity Capture-MS Homo sapiens
558 DYRK2 8445
Affinity Capture-MS Homo sapiens
559 BMP4 652
Affinity Capture-MS Homo sapiens
560 ZC3H3  
Affinity Capture-MS Homo sapiens
561 DDX52  
Affinity Capture-MS Homo sapiens
562 C9orf72  
Affinity Capture-MS Homo sapiens
563 MDM2  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
564 Ccdc9  
Affinity Capture-MS Mus musculus
565 H2AFX 3014
Affinity Capture-MS Homo sapiens
566 RRP15  
Affinity Capture-MS Homo sapiens
567 PHC2  
Affinity Capture-MS Homo sapiens
568 YTHDC2 64848
Affinity Capture-MS Homo sapiens
569 ARRB2 409
Affinity Capture-MS Homo sapiens
570 GLUD1 2746
Affinity Capture-MS Homo sapiens
571 DNAJC19 131118
Affinity Capture-MS Homo sapiens
572 RPL10L 140801
Co-fractionation Homo sapiens
573 MINA 84864
Affinity Capture-MS Homo sapiens
574 NOL10  
Affinity Capture-MS Homo sapiens
575 ZNF746  
Affinity Capture-MS Homo sapiens
576 MRPS31  
Affinity Capture-MS Homo sapiens
577 Ccdc77  
Affinity Capture-MS Mus musculus
578 CUL5 8065
Affinity Capture-MS Homo sapiens
579 DGCR8  
Affinity Capture-MS Homo sapiens
580 IKBKB 3551
Co-fractionation Homo sapiens
581 ZNF48  
Affinity Capture-MS Homo sapiens
582 RPS15 6209
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
583 SRP72 6731
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
584 HIST1H2BD 3017
Cross-Linking-MS (XL-MS) Homo sapiens
585 NSA2  
Affinity Capture-MS Homo sapiens
586 EIF4A3 9775
Affinity Capture-MS Homo sapiens
587 PRDM5  
Affinity Capture-MS Homo sapiens
588 RBFOX2 23543
Two-hybrid Homo sapiens
589 RPS23 6228
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
590 TRIP4 9325
Affinity Capture-MS Homo sapiens
591 RPL23 9349
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
592 RPS6 6194
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
593 GRSF1 2926
Proximity Label-MS Homo sapiens
594 ZNF629 23361
Affinity Capture-MS Homo sapiens
595 DNAJC1 64215
Affinity Capture-MS Homo sapiens
596 HNRNPU 3192
Affinity Capture-MS Homo sapiens
597 GNB2L1 10399
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
598 BOP1 23246
Affinity Capture-MS Homo sapiens
599 NEDD8 4738
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which RPL4 is involved
PathwayEvidenceSource
Axon guidance IEA Reactome
Cap-dependent Translation Initiation TAS Reactome
Cellular response to starvation IEA Reactome
Cellular responses to stimuli IEA Reactome
Cellular responses to stress IEA Reactome
Developmental Biology IEA Reactome
Disease TAS Reactome
Eukaryotic Translation Elongation IEA Reactome
Eukaryotic Translation Initiation TAS Reactome
Eukaryotic Translation Termination IEA Reactome
Formation of a pool of free 40S subunits TAS Reactome
GTP hydrolysis and joining of the 60S ribosomal subunit TAS Reactome
Infectious disease TAS Reactome
Influenza Infection TAS Reactome
Influenza Viral RNA Transcription and Replication TAS Reactome
L13a-mediated translational silencing of Ceruloplasmin expression TAS Reactome
Major pathway of rRNA processing in the nucleolus and cytosol TAS Reactome
Metabolism IEA Reactome
Metabolism of amino acids and derivatives IEA Reactome
Metabolism of proteins TAS Reactome
Metabolism of proteins IEA Reactome
Metabolism of RNA TAS Reactome
Nervous system development IEA Reactome
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) TAS Reactome
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) TAS Reactome
Nonsense-Mediated Decay (NMD) TAS Reactome
Peptide chain elongation IEA Reactome
Regulation of expression of SLITs and ROBOs IEA Reactome
Response of EIF2AK4 (GCN2) to amino acid deficiency IEA Reactome
rRNA processing TAS Reactome
rRNA processing in the nucleus and cytosol TAS Reactome
Selenoamino acid metabolism IEA Reactome
Selenocysteine synthesis IEA Reactome
Signaling by ROBO receptors IEA Reactome
SRP-dependent cotranslational protein targeting to membrane IEA Reactome
SRP-dependent cotranslational protein targeting to membrane TAS Reactome
Translation TAS Reactome
Translation IEA Reactome
Viral Infection Pathways TAS Reactome
Viral mRNA Translation TAS Reactome





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