Gene description for PAPD5
Gene name PAP associated domain containing 5
Gene symbol PAPD5
Other names/aliases TRF4-2
Species Homo sapiens
 Database cross references - PAPD5
ExoCarta ExoCarta_64282
Vesiclepedia VP_64282
Entrez Gene 64282
HGNC 30758
MIM 605540
UniProt Q8NDF8  
 PAPD5 identified in exosomes derived from the following tissue/cell type
Hepatocytes 26054723    
 Gene ontology annotations for PAPD5
Molecular Function
    RNA binding GO:0003723 HDA
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
    metal ion binding GO:0046872 IEA
    telomerase RNA binding GO:0070034 IPI
    guanylyltransferase activity GO:0070568 IMP
    poly(A) RNA polymerase activity GO:1990817 IBA
    poly(A) RNA polymerase activity GO:1990817 IDA
Biological Process
    rRNA processing GO:0006364 IEA
    miRNA catabolic process GO:0010587 IDA
    RNA 3'-end processing GO:0031123 IBA
    mRNA 3'-end processing GO:0031124 IDA
    negative regulation of telomere maintenance via telomerase GO:0032211 IMP
    carbohydrate homeostasis GO:0033500 IMP
    polyadenylation-dependent ncRNA catabolic process GO:0043634 IBA
    polyadenylation-dependent ncRNA catabolic process GO:0043634 IMP
    cell division GO:0051301 IEA
    negative regulation of nuclear-transcribed mRNA poly(A) tail shortening GO:0060212 IMP
    histone mRNA catabolic process GO:0071044 IMP
    poly(A)-dependent snoRNA 3'-end processing GO:0071051 IDA
    RNA 3' uridylation GO:0071076 IMP
    positive regulation of 3'-UTR-mediated mRNA stabilization GO:1905870 IMP
Subcellular Localization
    nucleolus GO:0005730 IBA
    nucleolus GO:0005730 IDA
    cytoplasm GO:0005737 IDA
    cytosol GO:0005829 IDA
    plasma membrane GO:0005886 IDA
    TRAMP complex GO:0031499 IBA
    TRAMP complex GO:0031499 IDA
 Experiment description of studies that identified PAPD5 in exosomes
1
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
 Protein-protein interactions for PAPD5
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 CD3EAP  
Proximity Label-MS Homo sapiens
2 ZNF668  
Affinity Capture-MS Homo sapiens
3 RPSA 3921
Affinity Capture-MS Homo sapiens
4 H1FNT  
Affinity Capture-MS Homo sapiens
5 RSBN1L  
Affinity Capture-MS Homo sapiens
6 KRT6B 3854
Affinity Capture-MS Homo sapiens
7 MED17  
Affinity Capture-MS Homo sapiens
8 COIL  
Proximity Label-MS Homo sapiens
9 ZNF346  
Affinity Capture-MS Homo sapiens
10 KIAA0020 9933
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
11 KRT6A 3853
Affinity Capture-MS Homo sapiens
12 RCL1 10171
Affinity Capture-MS Homo sapiens
13 HIST1H1D 3007
Affinity Capture-MS Homo sapiens
14 RPA2 6118
Proximity Label-MS Homo sapiens
15 RPL13A 23521
Affinity Capture-MS Homo sapiens
16 RPL37A 6168
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
17 NOP56 10528
Proximity Label-MS Homo sapiens
18 RPS19 6223
Affinity Capture-MS Homo sapiens
19 RPL14 9045
Affinity Capture-MS Homo sapiens
20 PNMAL1  
Affinity Capture-MS Homo sapiens
21 TOMM22 56993
Affinity Capture-MS Homo sapiens
22 GPATCH4 54865
Affinity Capture-MS Homo sapiens
23 RBM6 10180
Affinity Capture-MS Homo sapiens
24 BCL7B  
Affinity Capture-MS Homo sapiens
25 DIAPH2  
Affinity Capture-MS Homo sapiens
26 NPM1 4869
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
27 FBL 2091
Proximity Label-MS Homo sapiens
28 H2AFY2 55506
Affinity Capture-MS Homo sapiens
29 ZNF2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
30 SRP14 6727
Affinity Capture-MS Homo sapiens
31 ADARB1 104
Affinity Capture-MS Homo sapiens
32 PRKRA 8575
Affinity Capture-MS Homo sapiens
33 EXOSC4 54512
Affinity Capture-MS Homo sapiens
34 RRP8  
Affinity Capture-MS Homo sapiens
35 SORT1 6272
Affinity Capture-MS Homo sapiens
36 MPHOSPH6 10200
Affinity Capture-MS Homo sapiens
37 CHD6 84181
Affinity Capture-MS Homo sapiens
38 EHD1 10938
Affinity Capture-MS Homo sapiens
39 NNT 23530
Affinity Capture-MS Homo sapiens
40 RPL30 6156
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
41 Gtf3c2  
Affinity Capture-MS Mus musculus
42 RTFDC1  
Affinity Capture-MS Homo sapiens
43 RPL4 6124
Affinity Capture-MS Homo sapiens
44 RBM28 55131
Affinity Capture-MS Homo sapiens
45 ZBTB47  
Affinity Capture-MS Homo sapiens
46 NUDT18  
Affinity Capture-MS Homo sapiens
47 RBM4B  
Affinity Capture-MS Homo sapiens
48 SRSF6 6431
Affinity Capture-MS Homo sapiens
49 PURG  
Affinity Capture-MS Homo sapiens
50 TCTN3  
Affinity Capture-MS Homo sapiens
51 RPL18A 6142
Affinity Capture-MS Homo sapiens
52 SMARCA4 6597
Affinity Capture-MS Homo sapiens
53 PSMD2 5708
Affinity Capture-MS Homo sapiens
54 RPL31 6160
Proximity Label-MS Homo sapiens
55 HIST1H1E 3008
Affinity Capture-MS Homo sapiens
56 EXOSC5 56915
Affinity Capture-MS Homo sapiens
57 RPL36 25873
Affinity Capture-MS Homo sapiens
58 ASCC2 84164
Affinity Capture-MS Homo sapiens
59 HIST1H1C 3006
Affinity Capture-MS Homo sapiens
60 RPA4  
Proximity Label-MS Homo sapiens
61 LYAR 55646
Affinity Capture-MS Homo sapiens
62 HECTD1 25831
Affinity Capture-MS Homo sapiens
63 RPLP0 6175
Affinity Capture-MS Homo sapiens
64 MAGEB2 4113
Affinity Capture-MS Homo sapiens
65 MYBBP1A 10514
Affinity Capture-MS Homo sapiens
66 KDF1  
Affinity Capture-MS Homo sapiens
67 WDR46  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
68 CNBP 7555
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
69 FGFBP1 9982
Affinity Capture-MS Homo sapiens
70 NUMA1 4926
Affinity Capture-MS Homo sapiens
71 SF3B2 10992
Affinity Capture-MS Homo sapiens
72 ABT1 29777
Affinity Capture-MS Homo sapiens
73 RPL7A 6130
Affinity Capture-MS Homo sapiens
74 RPS2 6187
Affinity Capture-MS Homo sapiens
75 RPL35 11224
Affinity Capture-MS Homo sapiens
76 SRSF1 6426
Affinity Capture-MS Homo sapiens
77 NPM3 10360
Affinity Capture-MS Homo sapiens
78 SRSF5 6430
Affinity Capture-MS Homo sapiens
79 RPL3 6122
Affinity Capture-MS Homo sapiens
80 Cep152  
Affinity Capture-MS Mus musculus
81 ZC3H10  
Affinity Capture-MS Homo sapiens
82 ZCCHC7  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
83 CBX6  
Affinity Capture-MS Homo sapiens
84 RPA3 6119
Proximity Label-MS Homo sapiens
85 MPZL1 9019
Affinity Capture-MS Homo sapiens
86 HIST1H1A 3024
Affinity Capture-MS Homo sapiens
87 ZC3HAV1 56829
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
88 H2AFB2  
Affinity Capture-MS Homo sapiens
89 RPL11 6135
Affinity Capture-MS Homo sapiens
90 ZC3H3  
Affinity Capture-MS Homo sapiens
91 ZNF574  
Affinity Capture-MS Homo sapiens
92 RPL13 6137
Affinity Capture-MS Homo sapiens
93 SURF6  
Affinity Capture-MS Homo sapiens
94 RNF151  
Affinity Capture-MS Homo sapiens
95 PARP1 142
Proximity Label-MS Homo sapiens
96 MNDA 4332
Affinity Capture-MS Homo sapiens
97 DGCR8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
98 ZNF48  
Affinity Capture-MS Homo sapiens
99 UTP23  
Affinity Capture-MS Homo sapiens
100 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
101 RABL6 55684
Affinity Capture-MS Homo sapiens
102 MKI67  
Affinity Capture-MS Homo sapiens
103 NIFK 84365
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
104 KRR1 11103
Affinity Capture-MS Homo sapiens
105 RBM4 5936
Affinity Capture-MS Homo sapiens
106 NEIL1  
Affinity Capture-MS Homo sapiens
107 IL17B 27190
Affinity Capture-MS Homo sapiens
108 GLI4  
Affinity Capture-MS Homo sapiens
109 RPS6 6194
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
110 RPL8 6132
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
111 RPL28 6158
Affinity Capture-MS Homo sapiens
112 PPAN 56342
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
113 KRAS 3845
Negative Genetic Homo sapiens
114 RPP38 10557
Affinity Capture-MS Homo sapiens
115 ZSCAN25  
Affinity Capture-MS Homo sapiens
116 UNC119B 84747
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which PAPD5 is involved
No pathways found





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