Gene description for WDR36
Gene name WD repeat domain 36
Gene symbol WDR36
Other names/aliases GLC1G
TA-WDRP
TAWDRP
UTP21
Species Homo sapiens
 Database cross references - WDR36
ExoCarta ExoCarta_134430
Vesiclepedia VP_134430
Entrez Gene 134430
HGNC 30696
MIM 609669
UniProt Q8NI36  
 WDR36 identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Mesenchymal stem cells 36408942    
 Gene ontology annotations for WDR36
Molecular Function
    RNA binding GO:0003723 HDA
Biological Process
    rRNA processing GO:0006364 IBA
    visual perception GO:0007601 IEA
    ribosomal small subunit biogenesis GO:0042274 IDA
Subcellular Localization
    nucleoplasm GO:0005654 TAS
    small-subunit processome GO:0032040 IBA
    small-subunit processome GO:0032040 IDA
    Pwp2p-containing subcomplex of 90S preribosome GO:0034388 IBA
 Experiment description of studies that identified WDR36 in exosomes
1
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 488
MISEV standards
EM
Biophysical techniques
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for WDR36
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 HSD3B2 3284
Affinity Capture-MS Homo sapiens
2 RIT1 6016
Negative Genetic Homo sapiens
3 UBE2H 7328
Affinity Capture-MS Homo sapiens
4 RPL26L1 51121
Affinity Capture-MS Homo sapiens
5 NOP58 51602
Co-fractionation Homo sapiens
6 COIL  
Proximity Label-MS Homo sapiens
7 KIAA0020 9933
Co-fractionation Homo sapiens
8 BBS7 55212
Affinity Capture-MS Homo sapiens
9 RPL13A 23521
Affinity Capture-MS Homo sapiens
10 GNAQ 2776
Affinity Capture-Western Homo sapiens
11 NOP56 10528
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
12 KIF20A 10112
Affinity Capture-MS Homo sapiens
13 ZNF71  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
14 THOC7 80145
Co-fractionation Homo sapiens
15 FGF3  
Affinity Capture-MS Homo sapiens
16 PWP2 5822
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
17 SOX2  
Affinity Capture-MS Homo sapiens
18 DNAJB6 10049
Proximity Label-MS Homo sapiens
19 USP36  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
20 C9orf78 51759
Affinity Capture-MS Homo sapiens
21 DDX23 9416
Proximity Label-MS Homo sapiens
22 PARK2  
Affinity Capture-MS Homo sapiens
23 KIF23 9493
Affinity Capture-MS Homo sapiens
24 NOLC1 9221
Co-fractionation Homo sapiens
25 MPHOSPH10 10199
Co-fractionation Homo sapiens
26 YES1 7525
Affinity Capture-MS Homo sapiens
27 PRC1 9055
Affinity Capture-MS Homo sapiens
28 NPM1 4869
Affinity Capture-MS Homo sapiens
29 ANOS1 3730
Affinity Capture-MS Homo sapiens
30 FBL 2091
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
31 POLR1E  
Proximity Label-MS Homo sapiens
32 OBSL1 23363
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
33 ADARB1 104
Affinity Capture-MS Homo sapiens
34 WDR3  
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
35 GRWD1 83743
Co-fractionation Homo sapiens
36 BRD4 23476
Affinity Capture-MS Homo sapiens
37 BACE2 25825
Affinity Capture-MS Homo sapiens
38 DDX18 8886
Co-fractionation Homo sapiens
39 RRP8  
Affinity Capture-MS Homo sapiens
40 KLHL20  
Affinity Capture-MS Homo sapiens
41 MECP2 4204
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
42 CTPS1 1503
Co-fractionation Homo sapiens
43 MPHOSPH6 10200
Affinity Capture-MS Homo sapiens
44 KIF14 9928
Affinity Capture-MS Homo sapiens
45 HSPA8 3312
Affinity Capture-MS Homo sapiens
46 CHMP4C 92421
Affinity Capture-MS Homo sapiens
47 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
48 SUCLG1 8802
Two-hybrid Homo sapiens
49 RPL4 6124
Affinity Capture-MS Homo sapiens
50 RRP9 9136
Co-fractionation Homo sapiens
51 RBM4 5936
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
52 RBM4B  
Affinity Capture-MS Homo sapiens
53 HMMR  
Affinity Capture-MS Homo sapiens
54 APOBEC3C 27350
Affinity Capture-MS Homo sapiens
55 SRSF6 6431
Affinity Capture-MS Homo sapiens
56 NOP2 4839
Affinity Capture-MS Homo sapiens
57 CBX3 11335
Proximity Label-MS Homo sapiens
58 ABCF2 10061
Co-fractionation Homo sapiens
59 RPL18A 6142
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
60 MKRN2 23609
Affinity Capture-RNA Homo sapiens
61 CHMP4B 128866
Affinity Capture-MS Homo sapiens
62 NTRK1 4914
Affinity Capture-MS Homo sapiens
63 FGF8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
64 IFI16 3428
Affinity Capture-MS Homo sapiens
65 EXOSC4 54512
Affinity Capture-MS Homo sapiens
66 PARP1 142
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
67 FAM118B  
Affinity Capture-MS Homo sapiens
68 ARRDC3 57561
Affinity Capture-MS Homo sapiens
69 RPL27A 6157
Affinity Capture-MS Homo sapiens
70 NOB1  
Co-fractionation Homo sapiens
71 PML 5371
Affinity Capture-MS Homo sapiens
72 HECTD1 25831
Affinity Capture-MS Homo sapiens
73 SRPK3  
Affinity Capture-MS Homo sapiens
74 MAGEB2 4113
Affinity Capture-MS Homo sapiens
75 GTPBP4 23560
Co-fractionation Homo sapiens
76 CD3EAP  
Proximity Label-MS Homo sapiens
77 UTP15 84135
Co-fractionation Homo sapiens
78 ANLN 54443
Affinity Capture-MS Homo sapiens
79 FGFBP1 9982
Affinity Capture-MS Homo sapiens
80 ESRRA  
Co-fractionation Homo sapiens
81 RPL31 6160
Proximity Label-MS Homo sapiens
82 FANCD2  
Affinity Capture-MS Homo sapiens
83 ABT1 29777
Affinity Capture-MS Homo sapiens
84 CHCHD1  
Proximity Label-MS Homo sapiens
85 RC3H2  
Affinity Capture-MS Homo sapiens
86 ECT2 1894
Affinity Capture-MS Homo sapiens
87 SIRT7  
Affinity Capture-MS Homo sapiens
88 RLIM 51132
Affinity Capture-MS Homo sapiens
89 ELP3 55140
Co-fractionation Homo sapiens
90 NPM3 10360
Affinity Capture-MS Homo sapiens
91 RPS6 6194
Proximity Label-MS Homo sapiens
92 DCAF13 25879
Co-fractionation Homo sapiens
93 DNAJC17  
Proximity Label-MS Homo sapiens
94 ZNF467  
Affinity Capture-MS Homo sapiens
95 TBXA2R 6915
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
96 DUS3L 56931
Co-fractionation Homo sapiens
97 GNA11 2767
Affinity Capture-MS Homo sapiens
98 DGKZ  
Affinity Capture-MS Homo sapiens
99 C12orf74  
Affinity Capture-MS Homo sapiens
100 DKC1 1736
Co-fractionation Homo sapiens
101 HECW2  
Affinity Capture-MS Homo sapiens
102 GNB2 2783
Affinity Capture-MS Homo sapiens
103 DNAJC9 23234
Proximity Label-MS Homo sapiens
104 EGFR 1956
Negative Genetic Homo sapiens
105 RPL35A 6165
Affinity Capture-MS Homo sapiens
106 AATF  
Co-fractionation Homo sapiens
107 GNA13 10672
Affinity Capture-MS Homo sapiens
108 DDRGK1 65992
Affinity Capture-MS Homo sapiens
109 RNF2  
Affinity Capture-MS Homo sapiens
110 CCDC140  
Affinity Capture-MS Homo sapiens
111 DHX15 1665
Co-fractionation Homo sapiens
112 SURF6  
Affinity Capture-MS Homo sapiens
113 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
114 FBXW11  
Affinity Capture-MS Homo sapiens
115 UBN1  
Co-fractionation Homo sapiens
116 SIRT6  
Affinity Capture-MS Homo sapiens
117 TP53 7157
Affinity Capture-MS Homo sapiens
118 HDGF 3068
Affinity Capture-MS Homo sapiens
119 PLCB2  
Affinity Capture-Western Homo sapiens
120 POLR1B 84172
Co-fractionation Homo sapiens
121 NOL10  
Co-fractionation Homo sapiens
122 MNDA 4332
Affinity Capture-MS Homo sapiens
123 DNAJA2 10294
Affinity Capture-MS Homo sapiens
124 MCM5 4174
Affinity Capture-MS Homo sapiens
125 POLR1C 9533
Co-fractionation Homo sapiens
126 HAVCR2  
Affinity Capture-MS Homo sapiens
127 SMURF1 57154
Affinity Capture-MS Homo sapiens
128 ZNF48  
Affinity Capture-MS Homo sapiens
129 G3BP1 10146
Affinity Capture-MS Homo sapiens
130 TBL3 10607
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
131 G3BP2 9908
Affinity Capture-MS Homo sapiens
132 RPS5 6193
Co-fractionation Homo sapiens
133 MKI67  
Affinity Capture-MS Homo sapiens
134 NIFK 84365
Proximity Label-MS Homo sapiens
Co-fractionation Homo sapiens
135 ESR1  
Affinity Capture-MS Homo sapiens
136 DHX40  
Proximity Label-MS Homo sapiens
137 KRR1 11103
Co-fractionation Homo sapiens
138 NUP50 10762
Proximity Label-MS Homo sapiens
139 NOC2L 26155
Co-fractionation Homo sapiens
140 CLMN  
Affinity Capture-MS Homo sapiens
141 RPS24 6229
Proximity Label-MS Homo sapiens
142 TBL1Y  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
143 TECTB  
Affinity Capture-MS Homo sapiens
144 Rrbp1  
Affinity Capture-MS Mus musculus
145 PTGES3 10728
Affinity Capture-MS Homo sapiens
146 CUL7 9820
Affinity Capture-MS Homo sapiens
147 KRAS 3845
Negative Genetic Homo sapiens
148 HNRNPU 3192
Affinity Capture-MS Homo sapiens
149 RC3H1 149041
Affinity Capture-MS Homo sapiens
150 UTP6  
Affinity Capture-Western Homo sapiens
151 RP2 6102
Affinity Capture-MS Homo sapiens
152 RPA3 6119
Proximity Label-MS Homo sapiens
153 EXOSC1 51013
Affinity Capture-MS Homo sapiens
154 DDX56  
Co-fractionation Homo sapiens
155 CAPN2 824
Affinity Capture-MS Homo sapiens
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