Gene description for DDX39B
Gene name DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Gene symbol DDX39B
Other names/aliases BAT1
D6S81E
UAP56
Species Homo sapiens
 Database cross references - DDX39B
ExoCarta ExoCarta_7919
Vesiclepedia VP_7919
Entrez Gene 7919
HGNC 13917
MIM 142560
UniProt Q13838  
 DDX39B identified in sEVs derived from the following tissue/cell type
Bladder cancer cells 20224111    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Chondrocytes 35931686    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 34887515    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Foreskin fibroblasts 34108659    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Lymphoma cells 34108659    
Mammary cancer-associated fibroblasts 34108659    
Mesenchymal stem cells 36408942    
Monocytic leukemia cells 34108659    
Neuroblastoma cells 25944692    
Normal mammary epithelial cells 34108659    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pluripotent stem cells 34108659    
Prostate cancer cells 25844599    
Prostate cancer cells 25844599    
Squamous carcinoma cells 20124223    
T lymphocytes 34108659    
Thymus 23844026    
 Gene ontology annotations for DDX39B
Molecular Function
    DNA clamp loader activity GO:0003689 IEA
    RNA binding GO:0003723 HDA
    RNA helicase activity GO:0003724 IBA
    RNA helicase activity GO:0003724 IDA
    mRNA binding GO:0003729 IBA
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
    ATP-dependent activity, acting on RNA GO:0008186 IDA
    ATP hydrolysis activity GO:0016887 EXP
    U6 snRNA binding GO:0017070 IDA
    U4 snRNA binding GO:0030621 IDA
    identical protein binding GO:0042802 IPI
    ATP-dependent protein binding GO:0043008 IDA
    cohesin loader activity GO:0061775 IEA
    chromatin extrusion motor activity GO:0140584 IEA
    ATP-dependent H3-H4 histone complex chaperone activity GO:0140665 IEA
    ATP-dependent H2AZ histone chaperone activity GO:0140849 IEA
Biological Process
    spliceosomal complex assembly GO:0000245 IDA
    mRNA splicing, via spliceosome GO:0000398 IBA
    mRNA splicing, via spliceosome GO:0000398 IGI
    chromatin remodeling GO:0006338 IEA
    RNA export from nucleus GO:0006405 TAS
    mRNA export from nucleus GO:0006406 IBA
    mRNA export from nucleus GO:0006406 IDA
    mRNA export from nucleus GO:0006406 IGI
    RNA splicing GO:0008380 IDA
    RNA secondary structure unwinding GO:0010501 IDA
    chromatin looping GO:0140588 IEA
Subcellular Localization
    transcription export complex GO:0000346 IDA
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 TAS
    spliceosomal complex GO:0005681 IDA
    U4 snRNP GO:0005687 IDA
    U6 snRNP GO:0005688 IDA
    cytoplasm GO:0005737 IDA
    nuclear speck GO:0016607 IDA
 Experiment description of studies that identified DDX39B in sEVs
1
Experiment ID 76
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|GAPDH|HSP90|CD81|CD9|CD63|LAMP1|MHCI
Enriched markers
✔
HSP90B1
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20224111    
Organism Homo sapiens
Experiment description Proteomics analysis of bladder cancer exosomes.
Authors "Welton JL, Khanna S, Giles PJ, Brennan P, Brewis IA, Staffurth J, Mason MD, Clayton A."
Journal name MCP
Publication year 2010
Sample Bladder cancer cells
Sample name HT1376
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.10-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [MALDI TOF/TOF]
Western blotting
FACS
2
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
6
Experiment ID 412
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MCF7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
7
Experiment ID 414
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
8
Experiment ID 426
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
9
Experiment ID 427
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
10
Experiment ID 494
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD151|CD63|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Osteoarthritic cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
11
Experiment ID 496
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name Healthy cartilage
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
12
Experiment ID 497
MISEV standards
✘ Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
13
Experiment ID 498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
14
Experiment ID 207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DKO-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
15
Experiment ID 208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name Dks-8
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
16
Experiment ID 209
MISEV standards
✘ Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DLD-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
17
Experiment ID 1203
MISEV standards
✔
EM
Biophysical techniques
✔
SDCBP|FLOT1|CD9|CD81|CD63|EPCAM|GAPDH|LAMP1|TFRC|CD151|CD82|LAMP2|RAB35|TSG101|FLOT2|RAB5B|ICAM1|RAB5A
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 34887515    
Organism Homo sapiens
Experiment description Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets
Authors "Zhang Q, Jeppesen DK, Higginbotham JN, Graves-Deal R, Trinh VQ, Ramirez MA, Sohn Y, Neininger AC, Taneja N, McKinley ET, Niitsu H, Cao Z, Evans R, Glass SE, Ray KC, Fissell WH, Hill S, Rose KL, Huh WJ, Washington MK, Ayers GD, Burnette DT, Sharma S, Rome LH, Franklin JL, Lee YA, Liu Q, Coffey RJ."
Journal name Nat Cell Biol
Publication year 2021
Sample Colorectal cancer cells
Sample name DiFi
Isolation/purification methods Differential centrifugation
Filtration
Centrifugal ultrafiltration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
miRNA
Methods used in the study Western blotting
Mass spectrometry
RNA sequencing
18
Experiment ID 407
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
19
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
20
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
21
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
22
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
23
Experiment ID 405
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Foreskin fibroblasts
Sample name BJ
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
24
Experiment ID 363
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
25
Experiment ID 364
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
26
Experiment ID 365
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
27
Experiment ID 417
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Lymphoma cells
Sample name Raji
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
28
Experiment ID 411
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Mammary cancer-associated fibroblasts
Sample name mCAF
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
29
Experiment ID 488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
30
Experiment ID 418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
31
Experiment ID 224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25944692    
Organism Homo sapiens
Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name Oncotarget
Publication year 2015
Sample Neuroblastoma cells
Sample name SH-SY5Y
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
32
Experiment ID 413
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Normal mammary epithelial cells
Sample name MCF10A
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
33
Experiment ID 211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
34
Experiment ID 212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
35
Experiment ID 406
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name BxPC3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
36
Experiment ID 415
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
37
Experiment ID 434
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
38
Experiment ID 435
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
39
Experiment ID 408
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPDE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
40
Experiment ID 409
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPNE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
41
Experiment ID 416
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pluripotent stem cells
Sample name PSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
42
Experiment ID 275
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|RAB5A|CD9|CD82|CD63|CD81
Enriched markers
✔
AIF
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25844599    
Organism Homo sapiens
Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Authors "Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, Ullen A, Yachnin J, Nilsson S, Panaretakis T."
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - Docetaxel sensitive
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.12-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry/Flow cytometry/Western blotting
43
Experiment ID 274
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|RAB5A|CD9|CD82|CD63|CD81
Enriched markers
✔
AIF
Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25844599    
Organism Homo sapiens
Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Authors "Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, Ullen A, Yachnin J, Nilsson S, Panaretakis T."
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - Docetaxel resistant
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.18 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Flow cytometry
Western blotting
44
Experiment ID 191
MISEV standards
✘ Biophysical techniques
✔
Alix|CD81|CD9
Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20124223    
Organism Homo sapiens
Experiment description Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors "Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK."
Journal name Mol Cell Proteomics
Publication year 2010
Sample Squamous carcinoma cells
Sample name Squamous carcinoma cell (A431)
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
45
Experiment ID 410
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample T lymphocytes
Sample name Jurkat
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
46
Experiment ID 217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for DDX39B
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 KRT4 3851
Affinity Capture-MS Homo sapiens
2 HDAC4  
Affinity Capture-MS Homo sapiens
3 PTMS 5763
Affinity Capture-MS Homo sapiens
4 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
5 SRPK2 6733
Affinity Capture-MS Homo sapiens
6 KRT6A 3853
Affinity Capture-MS Homo sapiens
7 ACTC1 70
Proximity Label-MS Homo sapiens
8 BRCA1 672
Affinity Capture-RNA Homo sapiens
9 UBE3A 7337
Co-fractionation Homo sapiens
10 HNRNPC 3183
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
11 THOC7 80145
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
12 CSTA 1475
Affinity Capture-MS Homo sapiens
13 PRPF40A 55660
Affinity Capture-MS Homo sapiens
14 PARK7 11315
Affinity Capture-MS Homo sapiens
15 ISG15 9636
Affinity Capture-MS Homo sapiens
16 SNRNP70 6625
Co-fractionation Homo sapiens
17 NDRG1 10397
Co-fractionation Homo sapiens
18 SF3B1 23451
Affinity Capture-MS Homo sapiens
19 AI837181  
Affinity Capture-MS Mus musculus
20 ETFA 2108
Co-fractionation Homo sapiens
21 KRT31 3881
Affinity Capture-MS Homo sapiens
22 KRT78 196374
Affinity Capture-MS Homo sapiens
23 C15orf52 388115
Affinity Capture-MS Homo sapiens
24 KPRP 448834
Affinity Capture-MS Homo sapiens
25 SFN 2810
Affinity Capture-MS Homo sapiens
26 MECP2 4204
Affinity Capture-MS Homo sapiens
27 SLU7  
Co-fractionation Homo sapiens
28 SREK1 140890
Affinity Capture-MS Homo sapiens
29 SOD1 6647
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
30 BACH1 571
Affinity Capture-MS Homo sapiens
31 EMC9  
Affinity Capture-MS Homo sapiens
32 SUPT5H 6829
Affinity Capture-MS Homo sapiens
33 C17orf85  
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 C19orf47  
Affinity Capture-MS Homo sapiens
35 ARG1 383
Affinity Capture-MS Homo sapiens
36 PABPC1 26986
Co-fractionation Homo sapiens
37 CDH1 999
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
38 KRT80 144501
Affinity Capture-MS Homo sapiens
39 SLX4  
Affinity Capture-MS Homo sapiens
40 ACADM 34
Co-fractionation Homo sapiens
41 PRR4 11272
Affinity Capture-MS Homo sapiens
42 P4HB 5034
Affinity Capture-MS Homo sapiens
43 ENO1 2023
Affinity Capture-MS Homo sapiens
44 DDX39B 7919
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
45 PLCXD2  
Affinity Capture-MS Homo sapiens
46 HIST1H2BH 8345
Cross-Linking-MS (XL-MS) Homo sapiens
47 SLC25A5 292
Affinity Capture-MS Homo sapiens
48 ANLN 54443
Affinity Capture-MS Homo sapiens
49 HSPA5 3309
Affinity Capture-MS Homo sapiens
50 RBM39 9584
Affinity Capture-MS Homo sapiens
51 C2orf49 79074
Affinity Capture-MS Homo sapiens
52 HADHA 3030
Cross-Linking-MS (XL-MS) Homo sapiens
53 KIF20A 10112
Affinity Capture-MS Homo sapiens
54 IGHA1 3493
Affinity Capture-MS Homo sapiens
55 KRT86  
Affinity Capture-MS Homo sapiens
56 ERBB2IP 55914
Affinity Capture-MS Homo sapiens
57 CUL3 8452
Affinity Capture-MS Homo sapiens
58 EIF4E 1977
Affinity Capture-Western Homo sapiens
59 ZC3H11A  
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
60 RBBP4 5928
Co-fractionation Homo sapiens
61 MYO1C 4641
Affinity Capture-MS Homo sapiens
62 YTHDC1  
Affinity Capture-MS Homo sapiens
63 FANCA  
Two-hybrid Homo sapiens
64 HNRNPR 10236
Affinity Capture-MS Homo sapiens
65 PCBP1 5093
Affinity Capture-MS Homo sapiens
66 RPA3 6119
Proximity Label-MS Homo sapiens
67 HSPA1A 3303
Cross-Linking-MS (XL-MS) Homo sapiens
68 SAC3D1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
69 STMN1 3925
Affinity Capture-MS Homo sapiens
70 HSPE1 3336
Affinity Capture-MS Homo sapiens
71 FASN 2194
Affinity Capture-MS Homo sapiens
72 ZFC3H1 196441
Affinity Capture-MS Homo sapiens
73 KRT84 3890
Affinity Capture-MS Homo sapiens
74 CHTOP  
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
75 THOC3  
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
76 WWOX 51741
Affinity Capture-MS Homo sapiens
77 STRN4 29888
Two-hybrid Homo sapiens
78 RBM25 58517
Affinity Capture-MS Homo sapiens
79 HIST1H2BC 8347
Cross-Linking-MS (XL-MS) Homo sapiens
80 CDC40  
Affinity Capture-MS Homo sapiens
81 CAPZB 832
Affinity Capture-MS Homo sapiens
82 TRA2B 6434
Affinity Capture-MS Homo sapiens
83 DYNC1H1 1778
Cross-Linking-MS (XL-MS) Homo sapiens
84 RNASEH2A 10535
Affinity Capture-MS Homo sapiens
85 HM13 81502
Affinity Capture-MS Homo sapiens
86 ALYREF 10189
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
87 HNRNPL 3191
Affinity Capture-MS Homo sapiens
88 PRPF4 9128
Affinity Capture-MS Homo sapiens
89 CUL7 9820
Affinity Capture-MS Homo sapiens
90 ECM1 1893
Affinity Capture-MS Homo sapiens
91 ANXA2 302
Affinity Capture-MS Homo sapiens
92 SNRPA1 6627
Co-fractionation Homo sapiens
93 KRT7 3855
Affinity Capture-MS Homo sapiens
94 GNAI3 2773
Affinity Capture-MS Homo sapiens
95 GSTP1 2950
Affinity Capture-MS Homo sapiens
96 KRT77 374454
Affinity Capture-MS Homo sapiens
97 LUZP4  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
98 NCBP1 4686
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
99 LYZ 4069
Affinity Capture-MS Homo sapiens
100 KRT6B 3854
Affinity Capture-MS Homo sapiens
101 RBM22 55696
Affinity Capture-MS Homo sapiens
102 LENG8  
Affinity Capture-MS Homo sapiens
103 RPA2 6118
Proximity Label-MS Homo sapiens
104 CRYL1 51084
Affinity Capture-MS Homo sapiens
105 ALB 213
Affinity Capture-MS Homo sapiens
106 AP2A1 160
Affinity Capture-MS Homo sapiens
107 CHCHD1  
Proximity Label-MS Homo sapiens
108 GPT2  
Affinity Capture-MS Homo sapiens
109 SNRPF 6636
Affinity Capture-MS Homo sapiens
110 S100A14 57402
Affinity Capture-MS Homo sapiens
111 WTAP 9589
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
112 TKT 7086
Affinity Capture-MS Homo sapiens
113 PGK1 5230
Affinity Capture-MS Homo sapiens
114 IQSEC1 9922
Affinity Capture-MS Homo sapiens
115 MAGOHB 55110
Co-fractionation Homo sapiens
116 SRRM2 23524
Affinity Capture-MS Homo sapiens
117 OBSL1 23363
Affinity Capture-MS Homo sapiens
118 PRDX2 7001
Affinity Capture-MS Homo sapiens
119 VCAM1 7412
Affinity Capture-MS Homo sapiens
120 MRPS7 51081
Affinity Capture-MS Homo sapiens
121 SDCBP 6386
Two-hybrid Homo sapiens
122 Erh  
Affinity Capture-MS Mus musculus
123 PSMB3 5691
Affinity Capture-MS Homo sapiens
124 PFN1 5216
Affinity Capture-MS Homo sapiens
125 DSG1 1828
Affinity Capture-MS Homo sapiens
126 PRPF8 10594
Affinity Capture-MS Homo sapiens
127 DDX21 9188
Affinity Capture-MS Homo sapiens
128 MOB4 25843
Co-fractionation Homo sapiens
129 LYN 4067
Affinity Capture-MS Homo sapiens
130 PSMD14 10213
Affinity Capture-MS Homo sapiens
131 ACIN1 22985
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
132 TRIM24  
Affinity Capture-MS Homo sapiens
133 SNRNP200 23020
Co-fractionation Homo sapiens
134 ANXA4 307
Affinity Capture-MS Homo sapiens
135 S100A8 6279
Affinity Capture-MS Homo sapiens
136 KRT14 3861
Affinity Capture-MS Homo sapiens
137 MAGOH 4116
Affinity Capture-MS Homo sapiens
138 CYLD  
Affinity Capture-MS Homo sapiens
139 SNRPB2 6629
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
140 RTCB 51493
Affinity Capture-MS Homo sapiens
141 CAT 847
Affinity Capture-MS Homo sapiens
142 CASP14 23581
Affinity Capture-MS Homo sapiens
143 TUBB 203068
Affinity Capture-MS Homo sapiens
144 RPN2 6185
Co-fractionation Homo sapiens
145 RPS2 6187
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
146 PIP 5304
Affinity Capture-MS Homo sapiens
147 NCBP2 22916
Reconstituted Complex Homo sapiens
148 MTX2 10651
Affinity Capture-MS Homo sapiens
149 MEX3A  
Affinity Capture-RNA Homo sapiens
150 CIT 11113
Affinity Capture-MS Homo sapiens
151 FUS 2521
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
152 LGALS7 3963
Affinity Capture-MS Homo sapiens
153 UBL5 59286
Affinity Capture-MS Homo sapiens
154 CDK2 1017
Affinity Capture-MS Homo sapiens
155 KIAA1429 25962
Affinity Capture-MS Homo sapiens
156 MYC  
Affinity Capture-MS Homo sapiens
157 BAG1 573
Affinity Capture-MS Homo sapiens
158 BLMH 642
Affinity Capture-MS Homo sapiens
159 SNW1 22938
Affinity Capture-MS Homo sapiens
160 BMI1  
Affinity Capture-MS Homo sapiens
161 FYTTD1  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
162 PGAM1 5223
Affinity Capture-MS Homo sapiens
163 NR5A1  
Affinity Capture-RNA Homo sapiens
164 LMNA 4000
Affinity Capture-MS Homo sapiens
165 RAE1 8480
Affinity Capture-Western Homo sapiens
166 HUWE1 10075
Affinity Capture-MS Homo sapiens
167 DSP 1832
Affinity Capture-MS Homo sapiens
168 GSR 2936
Co-fractionation Homo sapiens
169 ILF3 3609
Affinity Capture-RNA Homo sapiens
170 SSRP1 6749
Affinity Capture-MS Homo sapiens
171 RPS4X 6191
Affinity Capture-MS Homo sapiens
172 DSC1 1823
Affinity Capture-MS Homo sapiens
173 SMAD4  
Affinity Capture-RNA Homo sapiens
174 HNRNPK 3190
Affinity Capture-MS Homo sapiens
175 DCD 117159
Affinity Capture-MS Homo sapiens
176 DDX39A 10212
Co-fractionation Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Negative Genetic Homo sapiens
177 Srsf1 110809
Affinity Capture-MS Mus musculus
178 CALML5 51806
Affinity Capture-MS Homo sapiens
179 ANXA5 308
Affinity Capture-MS Homo sapiens
180 CYCS 54205
Cross-Linking-MS (XL-MS) Homo sapiens
181 VPS33B 26276
Co-fractionation Homo sapiens
182 PRMT1 3276
Affinity Capture-MS Homo sapiens
183 ALKBH5 54890
Affinity Capture-MS Homo sapiens
184 CUL4A 8451
Affinity Capture-MS Homo sapiens
185 FLG2 388698
Affinity Capture-MS Homo sapiens
186 RALY 22913
Affinity Capture-MS Homo sapiens
187 DBF4B 80174
Affinity Capture-MS Homo sapiens
188 SLIRP 81892
Proximity Label-MS Homo sapiens
189 MARCKS 4082
Affinity Capture-MS Homo sapiens
190 PTMA 5757
Affinity Capture-MS Homo sapiens
191 KRT17 3872
Affinity Capture-MS Homo sapiens
192 Chmp4b 75608
Affinity Capture-MS Mus musculus
193 CCDC9  
Affinity Capture-MS Homo sapiens
194 PEBP1 5037
Affinity Capture-MS Homo sapiens
195 HNRNPUL2 221092
Affinity Capture-MS Homo sapiens
196 ATG13 9776
Affinity Capture-MS Homo sapiens
197 DIMT1 27292
Affinity Capture-MS Homo sapiens
198 GNG12 55970
Affinity Capture-MS Homo sapiens
199 DYNC1LI2 1783
Affinity Capture-MS Homo sapiens
200 WDR74 54663
Co-fractionation Homo sapiens
201 IQGAP1 8826
Affinity Capture-MS Homo sapiens
202 SF3A2 8175
Affinity Capture-MS Homo sapiens
203 KRT5 3852
Affinity Capture-MS Homo sapiens
204 POF1B 79983
Affinity Capture-MS Homo sapiens
205 ITGA4 3676
Affinity Capture-MS Homo sapiens
206 ATG16L1 55054
Affinity Capture-MS Homo sapiens
207 CALR 811
Affinity Capture-MS Homo sapiens
208 LCT  
Affinity Capture-MS Homo sapiens
209 THOC1 9984
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
210 PABPC4 8761
Co-fractionation Homo sapiens
211 RBM8A 9939
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
212 HSPA8 3312
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
213 DSC3 1825
Affinity Capture-MS Homo sapiens
214 DLD 1738
Affinity Capture-MS Homo sapiens
215 PARK2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
216 PHAX  
Affinity Capture-MS Homo sapiens
217 TUBA1A 7846
Affinity Capture-MS Homo sapiens
218 SRRT 51593
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
219 BARD1 580
Two-hybrid Homo sapiens
220 NTRK1 4914
Affinity Capture-MS Homo sapiens
221 U2AF2 11338
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
222 RPN1 6184
Co-fractionation Homo sapiens
223 GVINP1  
Cross-Linking-MS (XL-MS) Homo sapiens
224 DHX9 1660
Affinity Capture-MS Homo sapiens
225 GNAI2 2771
Affinity Capture-MS Homo sapiens
226 TECR 9524
Co-fractionation Homo sapiens
227 YAP1 10413
Affinity Capture-MS Homo sapiens
228 HDAC5 10014
Affinity Capture-MS Homo sapiens
229 DNM1L 10059
Affinity Capture-MS Homo sapiens
230 HMGB2 3148
Affinity Capture-MS Homo sapiens
231 IGHG1 3500
Affinity Capture-MS Homo sapiens
232 EIF4A2 1974
Co-fractionation Homo sapiens
233 OGT 8473
Reconstituted Complex Homo sapiens
234 ZBTB2 57621
Affinity Capture-MS Homo sapiens
235 METTL14  
Affinity Capture-MS Homo sapiens
236 SHROOM3 57619
Affinity Capture-MS Homo sapiens
237 BAG2 9532
Affinity Capture-MS Homo sapiens
238 HRNR 388697
Affinity Capture-MS Homo sapiens
239 H1F0 3005
Affinity Capture-MS Homo sapiens
240 HNRNPA1 3178
Co-fractionation Homo sapiens
241 S100A7A 338324
Affinity Capture-MS Homo sapiens
242 RBM33  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
243 BASP1 10409
Affinity Capture-MS Homo sapiens
244 A2ML1 144568
Affinity Capture-MS Homo sapiens
245 CAAP1  
Affinity Capture-MS Homo sapiens
246 TOP1 7150
Affinity Capture-MS Homo sapiens
247 MATR3 9782
Affinity Capture-MS Homo sapiens
248 RPLP1 6176
Affinity Capture-MS Homo sapiens
249 RNF2  
Affinity Capture-MS Homo sapiens
250 HSPD1 3329
Co-fractionation Homo sapiens
251 RBM17 84991
Affinity Capture-MS Homo sapiens
252 PIGR 5284
Affinity Capture-MS Homo sapiens
253 TGM1 7051
Affinity Capture-MS Homo sapiens
254 AHSA1 10598
Co-fractionation Homo sapiens
255 PRMT3 10196
Co-fractionation Homo sapiens
256 CPSF6 11052
Affinity Capture-MS Homo sapiens
257 RPS25 6230
Affinity Capture-MS Homo sapiens
258 HIST1H2BK 85236
Cross-Linking-MS (XL-MS) Homo sapiens
259 JUP 3728
Affinity Capture-MS Homo sapiens
260 ICT1 3396
Proximity Label-MS Homo sapiens
261 SNRPA 6626
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
262 HNRNPM 4670
Affinity Capture-MS Homo sapiens
263 TUBB3 10381
Two-hybrid Homo sapiens
264 THRAP3 9967
Affinity Capture-MS Homo sapiens
265 SHFM1 7979
Affinity Capture-MS Homo sapiens
266 HSPB1 3315
Affinity Capture-MS Homo sapiens
267 RBM15 64783
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
268 THOC6 79228
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
269 S100A9 6280
Affinity Capture-MS Homo sapiens
270 ASPRV1  
Affinity Capture-MS Homo sapiens
271 PDZD8 118987
Affinity Capture-MS Homo sapiens
272 API5 8539
Affinity Capture-MS Homo sapiens
273 SERPINB12 89777
Affinity Capture-MS Homo sapiens
274 SPAG1 6674
Affinity Capture-MS Homo sapiens
275 RPS7 6201
Co-fractionation Homo sapiens
276 NCCRP1 342897
Affinity Capture-MS Homo sapiens
277 LTF 4057
Affinity Capture-MS Homo sapiens
278 PSMA5 5686
Affinity Capture-MS Homo sapiens
279 UBE2H 7328
Affinity Capture-MS Homo sapiens
280 SLFN11 91607
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
281 POLDIP3 84271
Affinity Capture-MS Homo sapiens
282 BCLAF1 9774
Affinity Capture-MS Homo sapiens
283 ZC3H14  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
284 THOC2 57187
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
285 LSM4 25804
Co-fractionation Homo sapiens
286 PRPF3  
Affinity Capture-MS Homo sapiens
287 CALM1 801
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
288 AQR 9716
Affinity Capture-MS Homo sapiens
289 CFL1 1072
Affinity Capture-MS Homo sapiens
290 AZGP1 563
Affinity Capture-MS Homo sapiens
291 CTSD 1509
Affinity Capture-MS Homo sapiens
292 GSDMA 284110
Affinity Capture-MS Homo sapiens
293 TGFB1 7040
Affinity Capture-MS Homo sapiens
294 PCID2 55795
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
295 ANP32B 10541
Affinity Capture-MS Homo sapiens
296 SNRPC 6631
Affinity Capture-MS Homo sapiens
297 YWHAG 7532
Affinity Capture-MS Homo sapiens
298 DDOST 1650
Co-fractionation Homo sapiens
299 EED  
Affinity Capture-MS Homo sapiens
300 MYCN  
Affinity Capture-MS Homo sapiens
301 SSR3 6747
Co-fractionation Homo sapiens
302 NEDD4 4734
Affinity Capture-MS Homo sapiens
303 E2F4  
Affinity Capture-MS Homo sapiens
304 PRPF6 24148
Affinity Capture-MS Homo sapiens
305 LMNB1 4001
Affinity Capture-MS Homo sapiens
306 PPIB 5479
Affinity Capture-MS Homo sapiens
307 EMD 2010
Affinity Capture-MS Homo sapiens
308 HSP90B1 7184
Affinity Capture-MS Homo sapiens
309 STAU1 6780
Affinity Capture-MS Homo sapiens
310 ATF2  
Affinity Capture-MS Homo sapiens
311 UBE2I 7329
Two-hybrid Homo sapiens
312 PPP1R8 5511
Affinity Capture-MS Homo sapiens
313 HMGN1  
Affinity Capture-MS Homo sapiens
314 SUMO2 6613
Affinity Capture-MS Homo sapiens
315 C12orf10 60314
Co-fractionation Homo sapiens
316 DNM2 1785
Two-hybrid Homo sapiens
317 SARNP 84324
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
318 DHX38 9785
Co-fractionation Homo sapiens
319 C1orf68 100129271
Affinity Capture-MS Homo sapiens
320 ACTN1 87
Affinity Capture-MS Homo sapiens
321 SERPINB3 6317
Affinity Capture-MS Homo sapiens
322 PRPF4B 8899
Affinity Capture-MS Homo sapiens
323 FANCD2  
Affinity Capture-MS Homo sapiens
324 PNN 5411
Affinity Capture-MS Homo sapiens
325 SNRPB 6628
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
326 UQCRC2 7385
Co-fractionation Homo sapiens
327 CTNNB1 1499
Affinity Capture-MS Homo sapiens
328 IGKC 3514
Affinity Capture-MS Homo sapiens
329 TFAP4 7023
Affinity Capture-MS Homo sapiens
330 PDIA3 2923
Affinity Capture-MS Homo sapiens
331 THOC5 8563
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
332 CD59 966
Affinity Capture-MS Homo sapiens
333 SUZ12  
Affinity Capture-MS Homo sapiens
334 SART1 9092
Affinity Capture-MS Homo sapiens
335 SF3A1 10291
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
336 IL7R  
Protein-RNA Homo sapiens
337 FABP5 2171
Affinity Capture-MS Homo sapiens
338 TXNL1 9352
Co-fractionation Homo sapiens
339 SF3B3 23450
Affinity Capture-MS Homo sapiens
340 Bud13  
Affinity Capture-MS Mus musculus
341 WIBG 84305
Co-fractionation Homo sapiens
342 KRT16 3868
Affinity Capture-MS Homo sapiens
343 DHX15 1665
Affinity Capture-MS Homo sapiens
344 FN1 2335
Affinity Capture-MS Homo sapiens
345 SIRT6  
Affinity Capture-MS Homo sapiens
346 SRRM1 10250
Affinity Capture-MS Homo sapiens
347 ERH 2079
Affinity Capture-MS Homo sapiens
348 PDIA4 9601
Affinity Capture-MS Homo sapiens
349 SAP18 10284
Affinity Capture-MS Homo sapiens
350 HNRNPA2B1 3181
Co-fractionation Homo sapiens
351 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
352 EIF4A3 9775
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
353 PKP1 5317
Affinity Capture-MS Homo sapiens
354 KRT6C 286887
Affinity Capture-MS Homo sapiens
355 TGM3 7053
Affinity Capture-MS Homo sapiens
356 CAD 790
Affinity Capture-MS Homo sapiens
357 TRIP4 9325
Affinity Capture-MS Homo sapiens
358 SRSF7 6432
Affinity Capture-MS Homo sapiens
359 PINK1  
Affinity Capture-MS Homo sapiens
360 KCNAB1  
Affinity Capture-MS Homo sapiens
361 HNRNPU 3192
Affinity Capture-MS Homo sapiens
362 C9orf72  
Affinity Capture-MS Homo sapiens
363 KCTD18  
Affinity Capture-MS Homo sapiens
364 GAPDH 2597
Affinity Capture-MS Homo sapiens
365 ALDOA 226
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
366 CDC5L 988
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
367 APOA1 335
Affinity Capture-MS Homo sapiens
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Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here