Gene description for RPN1
Gene name ribophorin I
Gene symbol RPN1
Other names/aliases OST1
RBPH1
Species Homo sapiens
 Database cross references - RPN1
ExoCarta ExoCarta_6184
Vesiclepedia VP_6184
Entrez Gene 6184
HGNC 10381
MIM 180470
UniProt P04843  
 RPN1 identified in sEVs derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Breast cancer cells 34108659    
Colorectal cancer cells 17956143    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 34108659    
Embryonic kidney cells 36706192    
Embryonic kidney cells 36706192    
Foreskin fibroblasts 34108659    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Gastric cancer cells 33991177    
Lymphoma cells 34108659    
Mammary cancer-associated fibroblasts 34108659    
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Mesenchymal stem cells 36408942    
Monocytic leukemia cells 34108659    
Neuroblastoma cells 25944692    
Normal mammary epithelial cells 34108659    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic cancer cells 34108659    
Pancreatic duct epithalial cells 34108659    
Pancreatic duct epithalial cells 34108659    
Platelets 25332113    
Platelets 25332113    
Platelets 25332113    
Pluripotent stem cells 34108659    
Retinal pigment epithelial cells 35333565    
Retinal pigment epithelial cells 35333565    
T lymphocytes 34108659    
Thymus 23844026    
 Gene ontology annotations for RPN1
Molecular Function
    RNA binding GO:0003723 HDA
    dolichyl-diphosphooligosaccharide-protein glycotransferase activity GO:0004579 TAS
    protein binding GO:0005515 IPI
Biological Process
    protein N-linked glycosylation GO:0006487 IDA
    protein N-linked glycosylation GO:0006487 NAS
    protein N-linked glycosylation via asparagine GO:0018279 IBA
    protein N-linked glycosylation via asparagine GO:0018279 IMP
Subcellular Localization
    endoplasmic reticulum GO:0005783 IDA
    endoplasmic reticulum membrane GO:0005789 NAS
    endoplasmic reticulum membrane GO:0005789 TAS
    rough endoplasmic reticulum GO:0005791 ISS
    cytosol GO:0005829 IDA
    oligosaccharyltransferase complex GO:0008250 IBA
    oligosaccharyltransferase complex GO:0008250 IDA
    oligosaccharyltransferase complex GO:0008250 IPI
    oligosaccharyltransferase complex GO:0008250 NAS
    membrane GO:0016020 HDA
    melanosome GO:0042470 IEA
 Experiment description of studies that identified RPN1 in sEVs
1
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 412
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MCF7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
6
Experiment ID 414
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
7
Experiment ID 426
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
8
Experiment ID 427
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Breast cancer cells
Sample name MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
9
Experiment ID 20
MISEV standards
✔
EM
Biophysical techniques
✔
HSP90|CD63|CD81|LAMP1
Enriched markers
✔
GOLGA2|cytochrome c
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 17956143    
Organism Homo sapiens
Experiment description Proteomic analysis of microvesicles derived from human colorectal cancer cells.
Authors "Choi DS, Lee JM, Park GW, Lim HW, Bang JY, Kim YK, Kwon KH, Kwon HJ, Kim KP, Gho YS"
Journal name JPR
Publication year 2007
Sample Colorectal cancer cells
Sample name HT29
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Diafiltration
Flotation density 1.16 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [LTQ]
Western blotting
10
Experiment ID 407
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
11
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
12
Experiment ID 419
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
13
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
14
Experiment ID 420
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Embryonic kidney cells
Sample name HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
15
Experiment ID 1275
MISEV standards
Biophysical techniques
✔
CD9|TSG101|FLOT1|FLOT2|RAB35|RAB5A|GAPDH|TFRC|CD63|Alix
Enriched markers
✔
PCNA|CANX|GAPDH|HSP90AA1|HSP90B1
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36706192    
Organism Homo sapiens
Experiment description Displaying and delivering viral membrane antigens via WW domain-activated extracellular vesicles
Authors "Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q."
Journal name Sci Adv
Publication year 2023
Sample Embryonic kidney cells
Sample name HEK293T
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
16
Experiment ID 1280
MISEV standards
Biophysical techniques
✔
TSG101|CD9|FLOT1|FLOT2|RAB35|RAB5A|GAPDH|TFRC|CD63|Alix
Enriched markers
✔
PCNA|CANX|GAPDH|HSP90AA1|HSP90B1
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36706192    
Organism Homo sapiens
Experiment description Displaying and delivering viral membrane antigens via WW domain-activated extracellular vesicles
Authors "Choi S, Yang Z, Wang Q, Qiao Z, Sun M, Wiggins J, Xiang SH, Lu Q."
Journal name Sci Adv
Publication year 2023
Sample Embryonic kidney cells
Sample name HEK293T - Fraction 5
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density 1.151 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
17
Experiment ID 405
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Foreskin fibroblasts
Sample name BJ
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
18
Experiment ID 363
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
19
Experiment ID 364
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
20
Experiment ID 365
MISEV standards
✘ Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 33991177    
Organism Homo sapiens
Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name Proteomics
Publication year 2021
Sample Gastric cancer cells
Sample name MKN1 - 100K pellet
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
21
Experiment ID 417
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Lymphoma cells
Sample name Raji
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
22
Experiment ID 411
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Mammary cancer-associated fibroblasts
Sample name mCAF
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
23
Experiment ID 258
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name SKMEL28
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
24
Experiment ID 259
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name A375M
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
25
Experiment ID 260
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors "Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 1205Lu
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
26
Experiment ID 488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
27
Experiment ID 418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Monocytic leukemia cells
Sample name THP-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
28
Experiment ID 224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25944692    
Organism Homo sapiens
Experiment description Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors "Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name Oncotarget
Publication year 2015
Sample Neuroblastoma cells
Sample name SH-SY5Y
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
29
Experiment ID 413
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Normal mammary epithelial cells
Sample name MCF10A
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
30
Experiment ID 211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
31
Experiment ID 212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
32
Experiment ID 406
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name BxPC3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
33
Experiment ID 415
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
34
Experiment ID 434
MISEV standards
✘ Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Size exclusion chromatography
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
35
Experiment ID 435
MISEV standards
✘ Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘ Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic cancer cells
Sample name PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
OptiPrep density gradient centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
36
Experiment ID 408
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPDE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
37
Experiment ID 409
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pancreatic duct epithalial cells
Sample name HPNE
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
38
Experiment ID 231
MISEV standards
✘ Biophysical techniques
✔
Alix|CD63|CD9
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Western blotting
Mass spectrometry
39
Experiment ID 232
MISEV standards
✘ Biophysical techniques
✘ Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
40
Experiment ID 233
MISEV standards
✘ Biophysical techniques
✘ Enriched markers
✘ Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
41
Experiment ID 416
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample Pluripotent stem cells
Sample name PSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
42
Experiment ID 834
MISEV standards
✔
EM
Biophysical techniques
✔
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35333565    
Organism Homo sapiens
Experiment description LAMP2A regulates the loading of proteins into exosomes
Authors "Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name Sci Adv
Publication year 2022
Sample Retinal pigment epithelial cells
Sample name ARPE-19
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
43
Experiment ID 835
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35333565    
Organism Homo sapiens
Experiment description LAMP2A regulates the loading of proteins into exosomes
Authors "Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name Sci Adv
Publication year 2022
Sample Retinal pigment epithelial cells
Sample name ARPE-19
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
44
Experiment ID 410
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 34108659    
Organism Homo sapiens
Experiment description Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors "Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name Nat Cell Biol
Publication year 2021
Sample T lymphocytes
Sample name Jurkat
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
mRNA
Methods used in the study RT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
45
Experiment ID 217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RPN1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 SEC22B 9554
Proximity Label-MS Homo sapiens
2 ITGB1 3688
Proximity Label-MS Homo sapiens
3 GJD3  
Proximity Label-MS Homo sapiens
4 ARHGAP1 392
Proximity Label-MS Homo sapiens
5 UBL4A 8266
Affinity Capture-MS Homo sapiens
6 KRTCAP2 200185
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 PKM 5315
Co-fractionation Homo sapiens
8 SRPRB 58477
Proximity Label-MS Homo sapiens
9 HACD3 51495
Proximity Label-MS Homo sapiens
10 NPC1 4864
Proximity Label-MS Homo sapiens
11 CSNK1A1 1452
Affinity Capture-MS Homo sapiens
12 Sacm1l 83493
Affinity Capture-MS Mus musculus
13 JPH1 56704
Proximity Label-MS Homo sapiens
14 VMP1 81671
Proximity Label-MS Homo sapiens
15 SMG7  
Affinity Capture-MS Homo sapiens
16 UBC 7316
Reconstituted Complex Homo sapiens
17 BTN3A3 10384
Proximity Label-MS Homo sapiens
18 ST7  
Proximity Label-MS Homo sapiens
19 SOX2  
Affinity Capture-MS Homo sapiens
20 LPCAT1 79888
Proximity Label-MS Homo sapiens
21 GRB7 2886
Affinity Capture-MS Homo sapiens
22 ABCA3 21
Proximity Label-MS Homo sapiens
23 KIF23 9493
Affinity Capture-MS Homo sapiens
24 SMPD4 55627
Proximity Label-MS Homo sapiens
25 TMEM87A 25963
Proximity Label-MS Homo sapiens
26 METAP2 10988
Affinity Capture-MS Homo sapiens
27 SEL1L 6400
Affinity Capture-Western Homo sapiens
28 STT3A 3703
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
29 PPEF1  
Affinity Capture-MS Homo sapiens
30 OCLN 100506658
Proximity Label-MS Homo sapiens
31 USP33  
Proximity Label-MS Homo sapiens
32 ASB11  
Affinity Capture-Western Homo sapiens
Biochemical Activity Homo sapiens
Co-localization Homo sapiens
33 SLC25A46 91137
Proximity Label-MS Homo sapiens
34 BET1 10282
Proximity Label-MS Homo sapiens
35 MECP2 4204
Affinity Capture-MS Homo sapiens
36 SLC6A15 55117
Proximity Label-MS Homo sapiens
37 MLEC 9761
Affinity Capture-MS Homo sapiens
38 RBM14 10432
Affinity Capture-MS Homo sapiens
39 KIF14 9928
Affinity Capture-MS Homo sapiens
40 NOTCH2 4853
Proximity Label-MS Homo sapiens
41 CAMLG 819
Two-hybrid Homo sapiens
Proximity Label-MS Homo sapiens
42 KLF16  
Affinity Capture-MS Homo sapiens
43 CHMP4C 92421
Affinity Capture-MS Homo sapiens
44 SNAP47 116841
Proximity Label-MS Homo sapiens
45 TCP1 6950
Co-fractionation Homo sapiens
46 NOMO1 23420
Co-fractionation Homo sapiens
47 SENP2 59343
Proximity Label-MS Homo sapiens
48 RIN3  
Affinity Capture-MS Homo sapiens
49 USP11 8237
Affinity Capture-MS Homo sapiens
50 TMX1 81542
Proximity Label-MS Homo sapiens
51 GGT7 2686
Proximity Label-MS Homo sapiens
52 MAP1B 4131
Cross-Linking-MS (XL-MS) Homo sapiens
53 JAGN1 84522
Proximity Label-MS Homo sapiens
54 TLCD2  
Proximity Label-MS Homo sapiens
55 TUFM 7284
Co-fractionation Homo sapiens
56 CERS2 29956
Proximity Label-MS Homo sapiens
57 MAGT1 84061
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
58 UBAC2 337867
Proximity Label-MS Homo sapiens
59 UBXN8  
Proximity Label-MS Homo sapiens
60 CLCC1 23155
Proximity Label-MS Homo sapiens
61 YAP1 10413
Affinity Capture-MS Homo sapiens
62 SRBD1  
Proximity Label-MS Homo sapiens
63 VAPB 9217
Proximity Label-MS Homo sapiens
64 PIGT 51604
Proximity Label-MS Homo sapiens
65 PIGB  
Proximity Label-MS Homo sapiens
66 RDH13  
Co-fractionation Homo sapiens
67 ACADM 34
Co-fractionation Homo sapiens
68 ITM2C 81618
Proximity Label-MS Homo sapiens
69 SYNCRIP 10492
Co-fractionation Homo sapiens
70 FRAS1 80144
Proximity Label-MS Homo sapiens
71 CYC1 1537
Co-fractionation Homo sapiens
72 ANKHD1 54882
Affinity Capture-MS Homo sapiens
73 ZMYM6NB  
Proximity Label-MS Homo sapiens
74 HECTD1 25831
Affinity Capture-MS Homo sapiens
75 APOL2 23780
Proximity Label-MS Homo sapiens
76 DDX39B 7919
Co-fractionation Homo sapiens
77 SND1 27044
Co-fractionation Homo sapiens
78 VDAC2 7417
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
79 SEC61B 10952
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
80 SLC25A5 292
Co-fractionation Homo sapiens
81 CD3EAP  
Proximity Label-MS Homo sapiens
82 SSR4 6748
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
83 SCARNA22  
Affinity Capture-RNA Homo sapiens
84 ANLN 54443
Affinity Capture-MS Homo sapiens
85 PLAGL1  
Affinity Capture-MS Homo sapiens
86 DNAJB14  
Proximity Label-MS Homo sapiens
87 HSPA5 3309
Proximity Label-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
88 ANO6 196527
Proximity Label-MS Homo sapiens
89 SV2A 9900
Proximity Label-MS Homo sapiens
90 HIST1H3F 8968
Proximity Label-MS Homo sapiens
91 HADHB 3032
Co-fractionation Homo sapiens
92 AGPAT1 10554
Proximity Label-MS Homo sapiens
93 DOCK8 81704
Affinity Capture-MS Homo sapiens
94 LRRC59 55379
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
95 LMNB1 4001
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
96 SLC41A3 54946
Proximity Label-MS Homo sapiens
97 BCAP31 10134
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
98 TMEM199  
Proximity Label-MS Homo sapiens
99 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
100 FKBP8 23770
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
101 AAAS 8086
Proximity Label-MS Homo sapiens
102 LRRC32 2615
Affinity Capture-MS Homo sapiens
103 NOC2L 26155
Proximity Label-MS Homo sapiens
104 FN1 2335
Affinity Capture-MS Homo sapiens
105 WLS 79971
Proximity Label-MS Homo sapiens
106 SNX19  
Proximity Label-MS Homo sapiens
107 TMEM173  
Proximity Label-MS Homo sapiens
108 TREX1  
Affinity Capture-Western Homo sapiens
109 ZW10 9183
Proximity Label-MS Homo sapiens
110 SOAT1 6646
Proximity Label-MS Homo sapiens
111 MBOAT2  
Proximity Label-MS Homo sapiens
112 RPA3 6119
Proximity Label-MS Homo sapiens
113 TMCO1 54499
Co-fractionation Homo sapiens
114 DLST 1743
Affinity Capture-MS Homo sapiens
115 ABCC1 4363
Proximity Label-MS Homo sapiens
116 GSTK1 373156
Affinity Capture-MS Homo sapiens
117 LMF2 91289
Proximity Label-MS Homo sapiens
118 NCLN 56926
Affinity Capture-MS Homo sapiens
119 PSMC5 5705
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
120 SGTA 6449
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
121 ILK 3611
Affinity Capture-MS Homo sapiens
122 CYP2C9  
Proximity Label-MS Homo sapiens
123 COX2 4513
Co-fractionation Homo sapiens
124 EFNB2 1948
Affinity Capture-MS Homo sapiens
125 PEX3 8504
Proximity Label-MS Homo sapiens
126 COL17A1 1308
Cross-Linking-MS (XL-MS) Homo sapiens
127 SCCPDH 51097
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
128 GOLGB1 2804
Cross-Linking-MS (XL-MS) Homo sapiens
129 GBAS 2631
Co-fractionation Homo sapiens
130 SLC4A2 6522
Proximity Label-MS Homo sapiens
131 RELA 5970
Affinity Capture-MS Homo sapiens
132 HMGCR  
Proximity Label-MS Homo sapiens
133 CHML  
Proximity Label-MS Homo sapiens
134 DSG2 1829
Affinity Capture-MS Homo sapiens
135 TIA1 7072
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
136 TMEM57  
Proximity Label-MS Homo sapiens
137 USP49 25862
Affinity Capture-MS Homo sapiens
138 AGPAT9  
Proximity Label-MS Homo sapiens
139 WWOX 51741
Proximity Label-MS Homo sapiens
140 SUCLG2 8801
Co-fractionation Homo sapiens
141 EMC7 56851
Proximity Label-MS Homo sapiens
142 CLPTM1 1209
Proximity Label-MS Homo sapiens
143 RTN3 10313
Proximity Label-MS Homo sapiens
144 PTPN2 5771
Proximity Label-MS Homo sapiens
145 ITPR3 3710
Proximity Label-MS Homo sapiens
146 EBP  
Proximity Label-MS Homo sapiens
147 OS9 10956
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
148 ATAD3A 55210
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
149 RABL3 285282
Proximity Label-MS Homo sapiens
150 PTPN5  
Affinity Capture-MS Homo sapiens
151 TEX264 51368
Proximity Label-MS Homo sapiens
152 RAB2A 5862
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
153 ARHGAP36  
Affinity Capture-MS Homo sapiens
154 NDC1 55706
Proximity Label-MS Homo sapiens
155 ITPR1 3708
Proximity Label-MS Homo sapiens
156 EI24  
Proximity Label-MS Homo sapiens
157 CISD2 493856
Proximity Label-MS Homo sapiens
158 RAB5C 5878
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
159 WFS1 7466
Proximity Label-MS Homo sapiens
160 PRAF2 11230
Proximity Label-MS Homo sapiens
161 VANGL1 81839
Proximity Label-MS Homo sapiens
162 PSMC4 5704
Proximity Label-MS Homo sapiens
163 PTCH1  
Affinity Capture-MS Homo sapiens
164 PHF8  
Affinity Capture-MS Homo sapiens
165 BRI3BP 140707
Proximity Label-MS Homo sapiens
166 HSPA1B 3304
Proximity Label-MS Homo sapiens
167 DERL1 79139
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
168 C2CD2L 9854
Proximity Label-MS Homo sapiens
169 PDHA1 5160
Affinity Capture-MS Homo sapiens
170 ACOT7 11332
Affinity Capture-MS Homo sapiens
171 AFG3L2 10939
Co-fractionation Homo sapiens
172 Tmed2 56334
Affinity Capture-MS Mus musculus
173 TRPM4 54795
Proximity Label-MS Homo sapiens
174 SPRTN  
Affinity Capture-MS Homo sapiens
175 ATL1 51062
Proximity Label-MS Homo sapiens
176 ARHGAP39  
Affinity Capture-MS Homo sapiens
177 METTL7A 25840
Proximity Label-MS Homo sapiens
178 LAMP3  
Proximity Label-MS Homo sapiens
179 GJA1 2697
Proximity Label-MS Homo sapiens
180 KCTD10 83892
Affinity Capture-MS Homo sapiens
181 ARL6IP5 10550
Proximity Label-MS Homo sapiens
182 ADRB2  
Affinity Capture-MS Homo sapiens
183 NOP56 10528
Proximity Label-MS Homo sapiens
184 SRPR 6734
Proximity Label-MS Homo sapiens
185 SURF4 6836
Proximity Label-MS Homo sapiens
186 ARHGAP11B  
Affinity Capture-MS Homo sapiens
187 PHOSPHO1  
Affinity Capture-MS Homo sapiens
188 SYVN1 84447
Proximity Label-MS Homo sapiens
189 COPA 1314
Proximity Label-MS Homo sapiens
190 CPT1A 1374
Co-fractionation Homo sapiens
191 NUP160 23279
Proximity Label-MS Homo sapiens
192 ATP5L 10632
Co-fractionation Homo sapiens
193 VANGL2  
Proximity Label-MS Homo sapiens
194 PTDSS1 9791
Proximity Label-MS Homo sapiens
195 PPP2R1B 5519
Co-fractionation Homo sapiens
196 B3GNT2 10678
Affinity Capture-MS Homo sapiens
197 WDR41  
Proximity Label-MS Homo sapiens
198 CYB5B 80777
Proximity Label-MS Homo sapiens
199 H1FX 8971
Cross-Linking-MS (XL-MS) Homo sapiens
200 PRC1 9055
Affinity Capture-MS Homo sapiens
201 NUP210 23225
Proximity Label-MS Homo sapiens
202 WDR7 23335
Affinity Capture-MS Homo sapiens
203 OBSL1 23363
Affinity Capture-MS Homo sapiens
204 RAB5B 5869
Co-fractionation Homo sapiens
205 TMEM245 23731
Proximity Label-MS Homo sapiens
206 SUN2 25777
Proximity Label-MS Homo sapiens
207 TMEM97 27346
Proximity Label-MS Homo sapiens
208 VCAM1 7412
Affinity Capture-MS Homo sapiens
209 TOMM40 10452
Co-fractionation Homo sapiens
210 SCD5  
Proximity Label-MS Homo sapiens
211 CCT7 10574
Co-fractionation Homo sapiens
212 FGFR1 2260
Affinity Capture-MS Homo sapiens
213 TMEM201 199953
Proximity Label-MS Homo sapiens
214 LMAN1 3998
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
215 KIAA1715 80856
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
216 CHMP7 91782
Proximity Label-MS Homo sapiens
217 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
218 USP10 9100
Affinity Capture-MS Homo sapiens
219 DRG1 4733
Affinity Capture-MS Homo sapiens
220 NHS 4810
Affinity Capture-Western Homo sapiens
221 PSMD14 10213
Affinity Capture-MS Homo sapiens
222 GPR89A  
Proximity Label-MS Homo sapiens
223 TMEM43 79188
Affinity Capture-MS Homo sapiens
224 CCT6A 908
Co-fractionation Homo sapiens
225 CDKAL1  
Proximity Label-MS Homo sapiens
226 TUBA1C 84790
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
227 PBXIP1 57326
Proximity Label-MS Homo sapiens
228 YIF1A 10897
Proximity Label-MS Homo sapiens
229 SLC9A1 6548
Proximity Label-MS Homo sapiens
230 TRPM7 54822
Proximity Label-MS Homo sapiens
231 TAPT1 202018
Proximity Label-MS Homo sapiens
232 KCNB2  
Proximity Label-MS Homo sapiens
233 HM13 81502
Proximity Label-MS Homo sapiens
234 JAG2  
Proximity Label-MS Homo sapiens
235 PREB 10113
Proximity Label-MS Homo sapiens
236 BCL6  
Affinity Capture-MS Homo sapiens
237 STX5 6811
Proximity Label-MS Homo sapiens
238 TMEM131  
Proximity Label-MS Homo sapiens
239 ANO10 55129
Proximity Label-MS Homo sapiens
240 HERPUD1  
Proximity Label-MS Homo sapiens
241 ABCB7 22
Co-fractionation Homo sapiens
242 KDF1  
Affinity Capture-MS Homo sapiens
243 NOMO2 283820
Co-fractionation Homo sapiens
244 KRTAP1-3  
Two-hybrid Homo sapiens
245 RPN2 6185
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
246 LEO1 123169
Cross-Linking-MS (XL-MS) Homo sapiens
247 CANX 821
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
248 ICAM2 3384
Affinity Capture-MS Homo sapiens
249 EMC8 10328
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
250 RAB5A 5868
Co-fractionation Homo sapiens
251 ADCY9 115
Proximity Label-MS Homo sapiens
252 SLC27A4 10999
Proximity Label-MS Homo sapiens
253 PACRGL  
Affinity Capture-MS Homo sapiens
254 DMXL1 1657
Affinity Capture-MS Homo sapiens
255 PTPLA  
Affinity Capture-MS Homo sapiens
256 EGFR 1956
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Negative Genetic Homo sapiens
257 ABHD12 26090
Proximity Label-MS Homo sapiens
258 RFT1 91869
Proximity Label-MS Homo sapiens
259 CNR2  
Affinity Capture-MS Homo sapiens
260 ATP2A1 487
Proximity Label-MS Homo sapiens
261 FAM134B 54463
Proximity Label-MS Homo sapiens
262 VRK2 7444
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
263 DDRGK1 65992
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
264 BMI1  
Affinity Capture-MS Homo sapiens
265 RAB3A 5864
Affinity Capture-MS Homo sapiens
266 TMEM209 84928
Proximity Label-MS Homo sapiens
267 NELFB 25920
Affinity Capture-MS Homo sapiens
268 LMNA 4000
Proximity Label-MS Homo sapiens
269 OSBPL8 114882
Proximity Label-MS Homo sapiens
270 HUWE1 10075
Affinity Capture-MS Homo sapiens
271 OST4  
Affinity Capture-MS Homo sapiens
272 SLC25A3 5250
Co-fractionation Homo sapiens
273 SUN1 23353
Proximity Label-MS Homo sapiens
274 PIGW  
Proximity Label-MS Homo sapiens
275 SLC38A2 54407
Proximity Label-MS Homo sapiens
276 VDAC3 7419
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
277 TMEM9 252839
Proximity Label-MS Homo sapiens
278 ILF3 3609
Co-fractionation Homo sapiens
279 NUBP2 10101
Proximity Label-MS Homo sapiens
280 TP53 7157
Affinity Capture-MS Homo sapiens
281 PGRMC1 10857
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
282 TMEM214 54867
Proximity Label-MS Homo sapiens
283 PDCL 5082
Proximity Label-MS Homo sapiens
284 CALU 813
Proximity Label-MS Homo sapiens
285 TRIM13  
Proximity Label-MS Homo sapiens
286 TACC1 6867
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
287 ARF5 381
Proximity Label-MS Homo sapiens
288 TMEM106C 79022
Proximity Label-MS Homo sapiens
289 SRP19 6728
Affinity Capture-MS Homo sapiens
290 Arhgap30  
Affinity Capture-MS Mus musculus
291 NSDHL 50814
Proximity Label-MS Homo sapiens
292 PIGU 128869
Proximity Label-MS Homo sapiens
293 TOR1AIP1 26092
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
294 MMGT1 93380
Proximity Label-MS Homo sapiens
295 ESR1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
296 AUP1 550
Proximity Label-MS Homo sapiens
297 LRRC8D 55144
Proximity Label-MS Homo sapiens
298 DDX39A 10212
Co-fractionation Homo sapiens
299 BAG5 9529
Affinity Capture-MS Homo sapiens
300 EIF3M 10480
Co-fractionation Homo sapiens
301 ATP1A1 476
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
302 TMEM109 79073
Proximity Label-MS Homo sapiens
303 YKT6 10652
Proximity Label-MS Homo sapiens
304 ARF1 375
Proximity Label-MS Homo sapiens
305 KAT6A  
Affinity Capture-MS Homo sapiens
306 ATP5C1 509
Co-fractionation Homo sapiens
307 MYC  
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
308 CKAP4 10970
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
309 KIAA0922  
Proximity Label-MS Homo sapiens
310 TOMM5  
Co-fractionation Homo sapiens
311 ATP13A1 57130
Proximity Label-MS Homo sapiens
312 MTCH2 23788
Co-fractionation Homo sapiens
313 SLC3A2 6520
Proximity Label-MS Homo sapiens
314 ATAD1 84896
Proximity Label-MS Homo sapiens
315 SUCO  
Proximity Label-MS Homo sapiens
316 RPSA 3921
Co-fractionation Homo sapiens
317 CLCN7 1186
Proximity Label-MS Homo sapiens
318 MTCH1 23787
Co-fractionation Homo sapiens
319 RAB1A 5861
Co-fractionation Homo sapiens
320 ATP6V1A 523
Co-fractionation Homo sapiens
321 MARCKS 4082
Proximity Label-MS Homo sapiens
322 NBAS 51594
Proximity Label-MS Homo sapiens
323 SYNE2 23224
Proximity Label-MS Homo sapiens
324 PTPN1 5770
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
325 APBB1  
Affinity Capture-MS Homo sapiens
326 RPS6KB2  
Affinity Capture-MS Homo sapiens
327 RTN4 57142
Proximity Label-MS Homo sapiens
328 CAPZB 832
Affinity Capture-MS Homo sapiens
329 NDUFB9 4715
Co-fractionation Homo sapiens
330 PLEKHG4  
Affinity Capture-MS Homo sapiens
331 MGST1 4257
Co-fractionation Homo sapiens
332 Ophn1  
Affinity Capture-MS Mus musculus
333 FAM13B  
Affinity Capture-MS Homo sapiens
334 NDUFB8 4714
Co-fractionation Homo sapiens
335 MCM2 4171
Affinity Capture-MS Homo sapiens
336 RHBDD2  
Proximity Label-MS Homo sapiens
337 DSC2 1824
Proximity Label-MS Homo sapiens
338 LGR4 55366
Affinity Capture-MS Homo sapiens
339 LSG1  
Proximity Label-MS Homo sapiens
340 SSR1 6745
Proximity Label-MS Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
341 PSMC2 5701
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
342 KRAS 3845
Proximity Label-MS Homo sapiens
343 DHCR7 1717
Proximity Label-MS Homo sapiens
344 UGT8  
Proximity Label-MS Homo sapiens
345 PPP2R1A 5518
Co-fractionation Homo sapiens
346 PDIA6 10130
Co-fractionation Homo sapiens
347 CCDC47 57003
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
348 BCAP29 55973
Co-fractionation Homo sapiens
349 ATG16L1 55054
Affinity Capture-MS Homo sapiens
350 MXRA7 439921
Proximity Label-MS Homo sapiens
351 MTDH 92140
Proximity Label-MS Homo sapiens
352 TFCP2 7024
Affinity Capture-MS Homo sapiens
353 ESYT2 57488
Proximity Label-MS Homo sapiens
354 UBQLN4 56893
Two-hybrid Homo sapiens
355 CLGN 1047
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
356 RBM8A 9939
Affinity Capture-MS Homo sapiens
357 HSPA8 3312
Affinity Capture-MS Homo sapiens
358 DHRS7 51635
Proximity Label-MS Homo sapiens
359 INSIG2  
Affinity Capture-MS Homo sapiens
360 PXMP2  
Proximity Label-MS Homo sapiens
361 ATAD3B 83858
Co-fractionation Homo sapiens
362 LEMD3  
Proximity Label-MS Homo sapiens
363 EIF2AK3  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
364 ATP5A1 498
Co-fractionation Homo sapiens
365 NSG1  
Affinity Capture-MS Homo sapiens
366 REEP4  
Proximity Label-MS Homo sapiens
367 PARK2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
368 KDSR 2531
Co-fractionation Homo sapiens
369 NTRK1 4914
Affinity Capture-MS Homo sapiens
370 LAS1L 81887
Affinity Capture-MS Homo sapiens
371 U2AF2 11338
Affinity Capture-MS Homo sapiens
372 MYBL2 4605
Affinity Capture-MS Homo sapiens
373 SLC6A6 6533
Proximity Label-MS Homo sapiens
374 RPA4  
Proximity Label-MS Homo sapiens
375 DHFRL1  
Proximity Label-MS Homo sapiens
376 TECR 9524
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
377 SLX4IP  
Affinity Capture-MS Homo sapiens
378 TMEM33 55161
Proximity Label-MS Homo sapiens
379 HDAC5 10014
Affinity Capture-MS Homo sapiens
380 RMDN3 55177
Proximity Label-MS Homo sapiens
381 IPO9 55705
Co-fractionation Homo sapiens
382 SLC4A7 9497
Proximity Label-MS Homo sapiens
383 GLUD2 2747
Proximity Label-MS Homo sapiens
384 TONSL  
Affinity Capture-MS Homo sapiens
385 ASB5  
Affinity Capture-MS Homo sapiens
386 ZBTB2 57621
Affinity Capture-MS Homo sapiens
387 SPTLC1 10558
Affinity Capture-MS Homo sapiens
388 ITPR2 3709
Proximity Label-MS Homo sapiens
389 EMC3 55831
Affinity Capture-MS Homo sapiens
390 KMT2A  
Cross-Linking-MS (XL-MS) Homo sapiens
391 CDC73  
Affinity Capture-MS Homo sapiens
392 DNAJB12 54788
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
393 ATF6  
Proximity Label-MS Homo sapiens
394 ECT2 1894
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
395 GORASP2 26003
Proximity Label-MS Homo sapiens
396 LMNB2 84823
Proximity Label-MS Homo sapiens
397 HSD3B7 80270
Proximity Label-MS Homo sapiens
398 NR3C1 2908
Affinity Capture-MS Homo sapiens
399 STIM1 6786
Proximity Label-MS Homo sapiens
400 LMBR1  
Proximity Label-MS Homo sapiens
401 FBXO6 26270
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
402 PLXNB2 23654
Proximity Label-MS Homo sapiens
403 TM9SF3 56889
Proximity Label-MS Homo sapiens
404 PRPF19 27339
Co-fractionation Homo sapiens
405 EMC2 9694
Affinity Capture-MS Homo sapiens
406 SEC16A 9919
Proximity Label-MS Homo sapiens
407 RAB9A 9367
Proximity Label-MS Homo sapiens
408 DNAJC10 54431
Proximity Label-MS Homo sapiens
409 DNAJC3 5611
Proximity Label-MS Homo sapiens
410 PTPN23 25930
Affinity Capture-MS Homo sapiens
411 RNF2  
Affinity Capture-MS Homo sapiens
412 KTN1 3895
Proximity Label-MS Homo sapiens
413 ZC3HAV1 56829
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
414 RNF185  
Affinity Capture-MS Homo sapiens
415 HLA-A 3105
Proximity Label-MS Homo sapiens
416 AKAP1 8165
Proximity Label-MS Homo sapiens
417 ALG9 79796
Proximity Label-MS Homo sapiens
418 ACBD5 91452
Proximity Label-MS Homo sapiens
419 UBE2J1 51465
Proximity Label-MS Homo sapiens
420 MBOAT7 79143
Proximity Label-MS Homo sapiens
421 EIF2S1 1965
Co-fractionation Homo sapiens
422 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
423 ALDH3A2 224
Proximity Label-MS Homo sapiens
424 CCT8 10694
Co-fractionation Homo sapiens
425 RAB3GAP2 25782
Proximity Label-MS Homo sapiens
426 FBXL6  
Affinity Capture-MS Homo sapiens
427 TOR1AIP2 163590
Proximity Label-MS Homo sapiens
428 PIGO  
Proximity Label-MS Homo sapiens
429 CERS1 10715
Proximity Label-MS Homo sapiens
430 EDEM1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
431 NDUFA12 55967
Co-fractionation Homo sapiens
432 PICALM 8301
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
433 ERGIC1 57222
Proximity Label-MS Homo sapiens
434 IDH3A 3419
Co-fractionation Homo sapiens
435 PDZD8 118987
Proximity Label-MS Homo sapiens
436 UFL1 23376
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
437 INF2 64423
Proximity Label-MS Homo sapiens
438 RAB7A 7879
Proximity Label-MS Homo sapiens
439 TMEM38B  
Proximity Label-MS Homo sapiens
440 AGPAT6 137964
Proximity Label-MS Homo sapiens
441 SERBP1 26135
Affinity Capture-MS Homo sapiens
442 STT3B 201595
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
443 CLPTM1L 81037
Proximity Label-MS Homo sapiens
444 SLC39A7 7922
Proximity Label-MS Homo sapiens
445 RC3H1 149041
Affinity Capture-MS Homo sapiens
446 ATXN3 4287
Affinity Capture-MS Homo sapiens
447 SPCS2 9789
Proximity Label-MS Homo sapiens
448 EP300 2033
Affinity Capture-MS Homo sapiens
449 HLA-C 3107
Proximity Label-MS Homo sapiens
450 DNAJC22  
Affinity Capture-MS Homo sapiens
451 DPY19L1 23333
Proximity Label-MS Homo sapiens
452 UBE2H 7328
Affinity Capture-MS Homo sapiens
453 RIT1 6016
Negative Genetic Homo sapiens
454 SLC29A1 2030
Proximity Label-MS Homo sapiens
455 HSD17B11 51170
Proximity Label-MS Homo sapiens
456 POR 5447
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
457 ANKLE2 23141
Proximity Label-MS Homo sapiens
458 CCT3 7203
Co-fractionation Homo sapiens
459 ARID5B 84159
Cross-Linking-MS (XL-MS) Homo sapiens
460 COIL  
Proximity Label-MS Homo sapiens
461 TMEM161A  
Proximity Label-MS Homo sapiens
462 VAPA 9218
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
463 SSR2  
Co-fractionation Homo sapiens
464 ELOVL2  
Proximity Label-MS Homo sapiens
465 FBXO25  
Affinity Capture-MS Homo sapiens
466 VPS13A 23230
Proximity Label-MS Homo sapiens
467 LAMP2 3920
Proximity Label-MS Homo sapiens
468 DNAJC25 548645
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
469 GRAMD1A  
Proximity Label-MS Homo sapiens
470 PDE3B  
Proximity Label-MS Homo sapiens
471 HSD17B12 51144
Co-fractionation Homo sapiens
472 SLC12A2 6558
Proximity Label-MS Homo sapiens
473 APP 351
Proximity Label-MS Homo sapiens
474 TMPO 7112
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
475 TOMM22 56993
Co-fractionation Homo sapiens
476 USP36  
Affinity Capture-MS Homo sapiens
477 KIAA1429 25962
Affinity Capture-MS Homo sapiens
478 B3GAT1  
Proximity Label-MS Homo sapiens
479 PC 5091
Co-fractionation Homo sapiens
480 TGFB1 7040
Affinity Capture-MS Homo sapiens
481 SLC39A10 57181
Proximity Label-MS Homo sapiens
482 STIM2 57620
Proximity Label-MS Homo sapiens
483 Htatsf1  
Two-hybrid Mus musculus
484 COPS5 10987
Affinity Capture-MS Homo sapiens
485 CPD 1362
Proximity Label-MS Homo sapiens
486 STX18 53407
Proximity Label-MS Homo sapiens
487 TIAM1  
Affinity Capture-MS Homo sapiens
488 DDOST 1650
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
489 UBQLN1 29979
Two-hybrid Homo sapiens
490 PGRMC2 10424
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
491 DNAJC16  
Proximity Label-MS Homo sapiens
492 NFXL1 152518
Affinity Capture-MS Homo sapiens
493 EED  
Affinity Capture-MS Homo sapiens
494 SRP68 6730
Affinity Capture-MS Homo sapiens
495 ATP6V0D1 9114
Co-fractionation Homo sapiens
496 METTL14  
Affinity Capture-MS Homo sapiens
497 RAB35 11021
Proximity Label-MS Homo sapiens
498 MYCN  
Affinity Capture-MS Homo sapiens
499 SSR3 6747
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
500 MFSD10 10227
Proximity Label-MS Homo sapiens
501 SMARCB1 6598
Two-hybrid Homo sapiens
502 RBFOX2 23543
Two-hybrid Homo sapiens
503 ARHGAP9 64333
Affinity Capture-MS Homo sapiens
504 FAM20C 56975
Affinity Capture-MS Homo sapiens
505 PSMC3 5702
Co-fractionation Homo sapiens
506 TMEM63B 55362
Affinity Capture-MS Homo sapiens
507 TPT1 7178
Affinity Capture-MS Homo sapiens
508 CALR3  
Proximity Label-MS Homo sapiens
509 VKORC1L1 154807
Proximity Label-MS Homo sapiens
510 SDHA 6389
Affinity Capture-MS Homo sapiens
511 PPIB 5479
Co-fractionation Homo sapiens
512 COX15 1355
Affinity Capture-MS Homo sapiens
513 IKBIP 121457
Proximity Label-MS Homo sapiens
514 EMD 2010
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
515 STEAP3 55240
Proximity Label-MS Homo sapiens
516 RB1CC1 9821
Affinity Capture-MS Homo sapiens
517 LRIG2  
Proximity Label-MS Homo sapiens
518 ERBB3 2065
PCA Homo sapiens
519 CCPG1 9236
Proximity Label-MS Homo sapiens
520 HSP90B1 7184
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
521 PSMC1 5700
Co-fractionation Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
522 STAU1 6780
Affinity Capture-MS Homo sapiens
523 ATF2  
Affinity Capture-MS Homo sapiens
524 STAU2 27067
Affinity Capture-MS Homo sapiens
525 PLD3 23646
Proximity Label-MS Homo sapiens
526 CYB5A 1528
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
527 GRAMD4 23151
Affinity Capture-MS Homo sapiens
528 C16orf58 64755
Proximity Label-MS Homo sapiens
529 VCP 7415
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
530 SCAMP2 10066
Co-fractionation Homo sapiens
531 TP53I11  
Proximity Label-MS Homo sapiens
532 MIA3 375056
Proximity Label-MS Homo sapiens
533 ZMPSTE24 10269
Proximity Label-MS Homo sapiens
534 DDX54 79039
Proximity Label-MS Homo sapiens
535 CRY2  
Affinity Capture-MS Homo sapiens
536 TMX4 56255
Proximity Label-MS Homo sapiens
537 DNAJC30  
Proximity Label-MS Homo sapiens
538 RHOT2 89941
Proximity Label-MS Homo sapiens
539 SLC33A1 9197
Proximity Label-MS Homo sapiens
540 DNAJB11 51726
Proximity Label-MS Homo sapiens
541 SLC7A1 6541
Proximity Label-MS Homo sapiens
542 ACBD3 64746
Proximity Label-MS Homo sapiens
543 TEX2 55852
Proximity Label-MS Homo sapiens
544 PHB 5245
Proximity Label-MS Homo sapiens
545 SEC63 11231
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
546 PKMYT1  
Proximity Label-MS Homo sapiens
547 C4orf32  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
548 ICMT  
Proximity Label-MS Homo sapiens
549 IPO5 3843
Co-fractionation Homo sapiens
550 FANCD2  
Affinity Capture-MS Homo sapiens
551 ATP6AP2 10159
Proximity Label-MS Homo sapiens
552 CDK9 1025
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
553 OTUD1 220213
Affinity Capture-MS Homo sapiens
554 ATP2B1 490
Proximity Label-MS Homo sapiens
555 RPL35 11224
Co-fractionation Homo sapiens
556 UQCRC2 7385
Co-fractionation Homo sapiens
557 HMOX2 3163
Proximity Label-MS Homo sapiens
558 DAD1 1603
Affinity Capture-MS Homo sapiens
559 TMEM258  
Affinity Capture-MS Homo sapiens
560 IGF2R 3482
Proximity Label-MS Homo sapiens
561 SLC7A5 8140
Proximity Label-MS Homo sapiens
562 ARF6 382
Proximity Label-MS Homo sapiens
563 NCDN 23154
Affinity Capture-MS Homo sapiens
564 TMEM39A  
Proximity Label-MS Homo sapiens
565 FDFT1 2222
Proximity Label-MS Homo sapiens
566 REEP5 7905
Proximity Label-MS Homo sapiens
567 ACSL3 2181
Proximity Label-MS Homo sapiens
568 OSTC 58505
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
569 FAF2 23197
Proximity Label-MS Homo sapiens
570 FNDC3A 22862
Proximity Label-MS Homo sapiens
571 CERS6  
Proximity Label-MS Homo sapiens
572 STBD1 8987
Proximity Label-MS Homo sapiens
573 SCD 6319
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
574 VDAC1 7416
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
575 CLTC 1213
Co-fractionation Homo sapiens
576 GNB2L1 10399
Affinity Capture-MS Homo sapiens
577 SEC24B 10427
Affinity Capture-MS Homo sapiens
578 LBR 3930
Proximity Label-MS Homo sapiens
579 USE1 55850
Proximity Label-MS Homo sapiens
580 TMEM230 29058
Proximity Label-MS Homo sapiens
581 RRBP1 6238
Proximity Label-MS Homo sapiens
582 UBXN4 23190
Proximity Label-MS Homo sapiens
583 DNAJC19 131118
Affinity Capture-MS Homo sapiens
584 FOXRED2  
Affinity Capture-Western Homo sapiens
585 SYAP1 94056
Proximity Label-MS Homo sapiens
586 TUBG1 7283
Affinity Capture-MS Homo sapiens
587 PDIA4 9601
Proximity Label-MS Homo sapiens
588 RAB3GAP1 22930
Proximity Label-MS Homo sapiens
589 ZNF746  
Affinity Capture-MS Homo sapiens
590 TPTE  
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
591 RAB1B 81876
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
592 TYW1  
Proximity Label-MS Homo sapiens
593 PIGK 10026
Proximity Label-MS Homo sapiens
594 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
595 HIST1H2BD 3017
Proximity Label-MS Homo sapiens
596 DOLPP1  
Proximity Label-MS Homo sapiens
597 RRP1 8568
Affinity Capture-MS Homo sapiens
598 UBIAD1 29914
Proximity Label-MS Homo sapiens
599 FADS2 9415
Proximity Label-MS Homo sapiens
600 UBB 7314
Proximity Label-MS Homo sapiens
601 NUP107 57122
Proximity Label-MS Homo sapiens
602 SEC62 7095
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
603 TRIM31  
Affinity Capture-MS Homo sapiens
604 PINK1  
Affinity Capture-MS Homo sapiens
605 SLC6A8 6535
Proximity Label-MS Homo sapiens
606 CYB5R3 1727
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
607 CDK5RAP3 80279
Proximity Label-MS Homo sapiens
608 MOSPD2 158747
Proximity Label-MS Homo sapiens
609 DNAJC1 64215
Proximity Label-MS Homo sapiens
610 HNRNPU 3192
Co-fractionation Homo sapiens
611 C9orf72  
Affinity Capture-MS Homo sapiens
612 ESYT1 23344
Proximity Label-MS Homo sapiens
613 VEZT 55591
Proximity Label-MS Homo sapiens
614 CDC5L 988
Co-fractionation Homo sapiens
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here