Gene ontology annotations for UBE3A
Experiment description of studies that identified UBE3A in exosomes
1
Experiment ID
207
ISEV standards
✔
EM
EV Biophysical techniques
✔
TSG101|HSP70
EV Cytosolic markers
✔
FLOT1
EV Membrane markers
✔
VDAC
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ.
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DKO-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
2
Experiment ID
208
ISEV standards
✔
EM
EV Biophysical techniques
✔
TSG101|HSP70
EV Cytosolic markers
✔
FLOT1
EV Membrane markers
✔
VDAC
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ.
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
Dks-8
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
3
Experiment ID
209
ISEV standards
✘
EV Biophysical techniques
✔
TSG101|HSP70
EV Cytosolic markers
✔
FLOT1
EV Membrane markers
✔
VDAC
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ.
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DLD-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for UBE3A
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
UBE2L3
7332
Invivo
Homo sapiens
Invitro
Homo sapiens
Two-hybrid
Homo sapiens
Biochemical Activity
Homo sapiens
Biochemical Activity
Homo sapiens
2
UBE2G2
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
3
MCM7
4176
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
4
UBQLN2
29978
Invivo
Homo sapiens
Two-hybrid
Homo sapiens
5
BPY2
Two-hybrid
Homo sapiens
6
LCK
3932
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
7
UBE2D3
7323
Affinity Capture-MS
Homo sapiens
Biochemical Activity
Homo sapiens
8
UBE2D2
7322
Biochemical Activity
Homo sapiens
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
9
UBE3A
7337
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
10
UBE2G1
7326
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
11
BRCA1
672
Reconstituted Complex
Homo sapiens
12
SMAD9
Affinity Capture-MS
Homo sapiens
13
PGR
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
14
BLK
640
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
15
BPY2B
Invivo
Homo sapiens
Two-hybrid
Homo sapiens
16
TSC2
7249
Reconstituted Complex
Homo sapiens
17
TP53
Invivo
Homo sapiens
Invivo
Homo sapiens
Invitro
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
18
UBE2L6
Invitro
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
19
UBE2D1
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
Biochemical Activity
Homo sapiens
20
BARD1
580
Reconstituted Complex
Homo sapiens
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Pathways in which UBE3A is involved