Gene description for TGFB1
Gene name transforming growth factor, beta 1
Gene symbol TGFB1
Other names/aliases CED
DPD1
LAP
TGFB
TGFbeta
Species Homo sapiens
 Database cross references - TGFB1
ExoCarta ExoCarta_7040
Entrez Gene 7040
HGNC 11766
MIM 190180
UniProt P01137  
 TGFB1 identified in exosomes derived from the following tissue/cell type
Mesenchymal stem cells Unpublished / Not applicable
Platelets 25332113    
Platelets 25332113    
Platelets 25332113    
Prostate cancer cells 25857301    
Serum 19109410    
 Gene ontology annotations for TGFB1
Molecular Function
    growth factor activity GO:0008083 IEA
    protein N-terminus binding GO:0047485 IEA
    glycoprotein binding GO:0001948 IPI
    antigen binding GO:0003823 IPI
    enzyme binding GO:0019899 IPI
    type II transforming growth factor beta receptor binding GO:0005114 IPI
    protein homodimerization activity GO:0042803 IEA
    protein binding GO:0005515 IPI
    cytokine activity GO:0005125 TAS
    protein heterodimerization activity GO:0046982 IEA
    type III transforming growth factor beta receptor binding GO:0034714 IMP
    type I transforming growth factor beta receptor binding GO:0034713 IPI
Biological Process
    positive regulation of bone mineralization GO:0030501 IEP
    positive regulation of smooth muscle cell differentiation GO:0051152 IEA
    hematopoietic progenitor cell differentiation GO:0002244 IDA
    negative regulation of transcription, DNA-templated GO:0045892 IDA
    aging GO:0007568 IEA
    extrinsic apoptotic signaling pathway GO:0097191 IDA
    negative regulation of cell proliferation GO:0008285 IDA
    positive regulation of chemotaxis GO:0050921 IDA
    response to wounding GO:0009611 IEP
    platelet degranulation GO:0002576 TAS
    response to drug GO:0042493 IEA
    regulation of blood vessel remodeling GO:0060312 NAS
    negative regulation of neuroblast proliferation GO:0007406 IEA
    regulatory T cell differentiation GO:0045066 IEA
    positive regulation of gene expression GO:0010628 IDA
    epidermal growth factor receptor signaling pathway GO:0007173 IDA
    response to estradiol GO:0032355 IDA
    endoderm development GO:0007492 IEA
    negative regulation of myoblast differentiation GO:0045662 IDA
    protein export from nucleus GO:0006611 IDA
    regulation of cartilage development GO:0061035 IEA
    negative regulation of skeletal muscle tissue development GO:0048642 IDA
    viral life cycle GO:0019058 TAS
    positive regulation of SMAD protein import into nucleus GO:0060391 IDA
    response to glucose GO:0009749 IEA
    ureteric bud development GO:0001657 IEA
    SMAD protein signal transduction GO:0060395 IBA
    negative regulation of macrophage cytokine production GO:0010936 IDA
    epithelial to mesenchymal transition GO:0001837 IEA
    protein import into nucleus, translocation GO:0000060 IDA
    negative regulation of extracellular matrix disassembly GO:0010716 IC
    mononuclear cell proliferation GO:0032943 IEA
    receptor catabolic process GO:0032801 IDA
    regulation of apoptotic process GO:0042981 IBA
    regulation of branching involved in mammary gland duct morphogenesis GO:0060762 IEA
    tolerance induction to self antigen GO:0002513 IEA
    negative regulation of mitotic cell cycle GO:0045930 IDA
    regulation of binding GO:0051098 ISS
    negative regulation of epithelial cell proliferation GO:0050680 IMP
    modulation by virus of host morphology or physiology GO:0019048 TAS
    lymph node development GO:0048535 ISS
    adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains GO:0002460 IEA
    positive regulation of collagen biosynthetic process GO:0032967 IMP
    regulation of cell migration GO:0030334 TAS
    salivary gland morphogenesis GO:0007435 IEP
    positive regulation of fibroblast migration GO:0010763 IDA
    response to cholesterol GO:0070723 IDA
    positive regulation of protein dephosphorylation GO:0035307 IDA
    phosphate-containing compound metabolic process GO:0006796 IDA
    pathway-restricted SMAD protein phosphorylation GO:0060389 IDA
    regulation of striated muscle tissue development GO:0016202 ISS
    positive regulation of superoxide anion generation GO:0032930 IDA
    organ regeneration GO:0031100 IEA
    cellular response to dexamethasone stimulus GO:0071549 IEA
    cell-cell junction organization GO:0045216 IDA
    regulation of actin cytoskeleton reorganization GO:2000249 IEA
    SMAD protein complex assembly GO:0007183 IDA
    cell development GO:0048468 IBA
    chondrocyte differentiation GO:0002062 IDA
    positive regulation of NAD+ ADP-ribosyltransferase activity GO:1901666 IDA
    positive regulation of protein import into nucleus GO:0042307 IDA
    positive regulation of MAP kinase activity GO:0043406 IDA
    positive regulation of protein kinase B signaling GO:0051897 IDA
    positive regulation of vascular endothelial growth factor production GO:0010575 TAS
    inner ear development GO:0048839 IEA
    negative regulation of transcription from RNA polymerase II promoter GO:0000122 IEA
    connective tissue replacement involved in inflammatory response wound healing GO:0002248 TAS
    positive regulation of protein secretion GO:0050714 IDA
    response to laminar fluid shear stress GO:0034616 IEA
    negative regulation of cell cycle GO:0045786 IDA
    cell cycle arrest GO:0007050 IDA
    extracellular matrix assembly GO:0085029 IDA
    positive regulation of protein phosphorylation GO:0001934 IDA
    positive regulation of peptidyl-threonine phosphorylation GO:0010800 IDA
    positive regulation of interleukin-17 production GO:0032740 IDA
    positive regulation of blood vessel endothelial cell migration GO:0043536 IDA
    T cell homeostasis GO:0043029 IEA
    negative regulation of fat cell differentiation GO:0045599 IDA
    platelet activation GO:0030168 TAS
    negative regulation of release of sequestered calcium ion into cytosol GO:0051280 IEA
    regulation of sodium ion transport GO:0002028 IEA
    SMAD protein import into nucleus GO:0007184 IDA
    MAPK cascade GO:0000165 IMP
    inflammatory response GO:0006954 IDA
    ATP biosynthetic process GO:0006754 IDA
    hyaluronan catabolic process GO:0030214 IDA
    branch elongation involved in mammary gland duct branching GO:0060751 IEA
    positive regulation of histone acetylation GO:0035066 IEA
    response to hypoxia GO:0001666 IEA
    negative regulation of cell-cell adhesion GO:0022408 IDA
    mitotic cell cycle checkpoint GO:0007093 IDA
    negative regulation of ossification GO:0030279 IEA
    germ cell migration GO:0008354 IEA
    negative regulation of cell differentiation GO:0045596 IEP
    positive regulation of apoptotic process GO:0043065 IEA
    negative regulation of hyaluronan biosynthetic process GO:1900126 IDA
    positive regulation of cell migration GO:0030335 IDA
    negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512 TAS
    common-partner SMAD protein phosphorylation GO:0007182 IDA
    negative regulation of T cell proliferation GO:0042130 IEA
    lipopolysaccharide-mediated signaling pathway GO:0031663 IDA
    response to radiation GO:0009314 IEA
    negative regulation of blood vessel endothelial cell migration GO:0043537 IDA
    positive regulation of phosphatidylinositol 3-kinase activity GO:0043552 IDA
    positive regulation of transcription from RNA polymerase II promoter GO:0045944 IDA
    cellular calcium ion homeostasis GO:0006874 IEA
    protein kinase B signaling GO:0043491 IMP
    regulation of transforming growth factor beta receptor signaling pathway GO:0017015 IDA
    positive regulation of protein complex assembly GO:0031334 IDA
    mammary gland branching involved in thelarche GO:0060744 IEA
    positive regulation of histone deacetylation GO:0031065 IEA
    positive regulation of NF-kappaB transcription factor activity GO:0051092 IEA
    protein phosphorylation GO:0006468 ISS
    active induction of host immune response by virus GO:0046732 TAS
    ossification involved in bone remodeling GO:0043932 IEP
    positive regulation of branching involved in ureteric bud morphogenesis GO:0090190 IEA
    evasion or tolerance of host defenses by virus GO:0019049 IDA
    positive regulation of cellular protein metabolic process GO:0032270 IDA
    cell growth GO:0016049 IEA
    defense response to fungus, incompatible interaction GO:0009817 IEA
    frontal suture morphogenesis GO:0060364 IEA
    positive regulation of pathway-restricted SMAD protein phosphorylation GO:0010862 IDA
    positive regulation of epithelial to mesenchymal transition GO:0010718 NAS
    lens fiber cell differentiation GO:0070306 IEA
    blood coagulation GO:0007596 TAS
    positive regulation of odontogenesis GO:0042482 IEA
    negative regulation of protein phosphorylation GO:0001933 IDA
    positive regulation of extracellular matrix assembly GO:1901203 IC
    myeloid dendritic cell differentiation GO:0043011 IEA
    positive regulation of epithelial cell proliferation GO:0050679 IEA
    negative regulation of gene silencing by miRNA GO:0060965 IGI
    regulation of protein import into nucleus GO:0042306 ISS
    cellular response to organic cyclic compound GO:0071407 IDA
    negative regulation of cell growth GO:0030308 IDA
    positive regulation of transcription, DNA-templated GO:0045893 ISS
    positive regulation of cell proliferation GO:0008284 IDA
    extracellular matrix organization GO:0030198 TAS
    positive regulation of transcription regulatory region DNA binding GO:2000679 IDA
    negative regulation of gene expression GO:0010629 IGI
    positive regulation of cell cycle arrest GO:0071158 IEA
    positive regulation of isotype switching to IgA isotypes GO:0048298 IDA
    negative regulation of phagocytosis GO:0050765 IEA
    response to progesterone GO:0032570 IDA
    digestive tract development GO:0048565 IEA
    macrophage derived foam cell differentiation GO:0010742 IC
    positive regulation of exit from mitosis GO:0031536 IEA
    positive regulation of peptidyl-serine phosphorylation GO:0033138 IDA
    female pregnancy GO:0007565 IEA
    cellular response to transforming growth factor beta stimulus GO:0071560 IGI
    transforming growth factor beta receptor signaling pathway GO:0007179 TAS
    response to vitamin D GO:0033280 IEA
    regulation of DNA binding GO:0051101 ISS
    face morphogenesis GO:0060325 IEA
    negative regulation of DNA replication GO:0008156 IMP
    myelination GO:0042552 IEA
Subcellular Localization
    platelet alpha granule lumen GO:0031093 TAS
    cytoplasm GO:0005737 IDA
    extracellular space GO:0005615 IDA
    microvillus GO:0005902 IDA
    cell surface GO:0009986 IMP
    proteinaceous extracellular matrix GO:0005578 ISS
    nucleus GO:0005634 IDA
    blood microparticle GO:0072562 IDA
    extracellular region GO:0005576 TAS
    axon GO:0030424 IEA
    Golgi lumen GO:0005796 TAS
    plasma membrane GO:0005886 TAS
    neuronal cell body GO:0043025 IEA
 Experiment description of studies that identified TGFB1 in exosomes
1
Experiment ID 126
ISEV standards
EV Biophysical techniques
GAPDH
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [LTQ-FT Ultra]
PubMed ID Unpublished / Not applicable
Organism Homo sapiens
Experiment description Mesenchymal Stem Cell Exosomes: The Future MSC-based Therapy?
Authors Ruenn Chai Lai, Ronne Wee Yeh Yeo, Soon Sim Tan, Bin Zhang, Yijun Yin, Newman Siu Kwan Sze, Andre Choo, and Sai Kiang Lim
Journal name Mesenchymal Stem Cell Therapy
Publication year 2011
Sample Mesenchymal stem cells
Sample name huES9.E1
Isolation/purification methods HPLC
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Antobody array
Mass spectrometry
2
Experiment ID 231
ISEV standards
EV Biophysical techniques
Alix
EV Cytosolic markers
CD63|CD9
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Western blotting
Mass spectrometry
3
Experiment ID 232
ISEV standards
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 233
ISEV standards
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
5
Experiment ID 250
ISEV standards
EM
EV Biophysical techniques
GAPDH|TSG101
EV Cytosolic markers
CD63|CD81
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25857301    
Organism Homo sapiens
Experiment description Large oncosomes contain distinct protein cargo and represent a separate functional class of tumor-derived extracellular vesicles.
Authors Minciacchi VR, You S, Spinelli C, Morley S, Zandian M, Aspuria PJ, Cavallini L, Ciardiello C, Reis Sobreiro M, Morello M, Kharmate G, Jang SC, Kim DK, Hosseini-Beheshti E, Tomlinson Guns E, Gleave M, Gho YS, Mathivanan S, Yang W, Freeman MR, Di Vizio D
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - expressing DIAPH3 hRNA
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
6
Experiment ID 250
ISEV standards
EM
EV Biophysical techniques
GAPDH|TSG101
EV Cytosolic markers
CD63|CD81
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25857301    
Organism Homo sapiens
Experiment description Large oncosomes contain distinct protein cargo and represent a separate functional class of tumor-derived extracellular vesicles.
Authors Minciacchi VR, You S, Spinelli C, Morley S, Zandian M, Aspuria PJ, Cavallini L, Ciardiello C, Reis Sobreiro M, Morello M, Kharmate G, Jang SC, Kim DK, Hosseini-Beheshti E, Tomlinson Guns E, Gleave M, Gho YS, Mathivanan S, Yang W, Freeman MR, Di Vizio D
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - expressing DIAPH3 hRNA
Isolation/purification methods Differential centrifugation
Ultracentrifugation
OptiPrep density gradient
Flotation density 1.10 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
7
Experiment ID 29
ISEV standards
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 19109410    
Organism Homo sapiens
Experiment description Proteomic and immunologic analyses of brain tumor exosomes.
Authors Graner MW, Alzate O, Dechkovskaia AM, Keene JD, Sampson JH, Mitchell DA, Bigner DD
Journal name FASEB
Publication year 2008
Sample Serum
Sample name Serum - Brain tumor
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
 Protein-protein interactions for TGFB1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 MMP2 4313
Affinity Capture-MS Homo sapiens
Biochemical Activity Homo sapiens
2 FCN1 2219
Co-purification Homo sapiens
3 PZP 5858
Invitro Homo sapiens
4 FMOD 2331
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
5 BGN 633
Invitro Homo sapiens
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
6 TGFBR2 7048
Affinity Capture-Western Homo sapiens
7 ITGB8 3696
Affinity Capture-MS Homo sapiens
8 EIF3I 8668
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
9 VTN 7448
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
10 YWHAE 7531
Invivo Homo sapiens
Affinity Capture-MS Homo sapiens
11 ENG 2022
Affinity Capture-MS Homo sapiens
12 COL2A1 1280
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
13 LTBP3 4054
Invivo Homo sapiens
14 LTBP4 8425
Invivo Homo sapiens
15 FNTA 2339
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
16 CTGF 1490
Invivo Homo sapiens
17 APP 351
Affinity Capture-MS Homo sapiens
18 SPARC 6678
Invivo Homo sapiens
Invitro Homo sapiens
Affinity Capture-MS Homo sapiens
19 CCL3  
Invivo Homo sapiens
20 DCN 1634
Invivo Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
Invitro Homo sapiens
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
21 DAXX  
Invivo Homo sapiens
Two-hybrid Homo sapiens
22 SNIP1  
Affinity Capture-Western Homo sapiens
23 TGFB1 7040
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
24 TGFBR1  
Affinity Capture-Western Homo sapiens
25 THBS1 7057
Invivo Homo sapiens
26 ACVRL1  
Invivo Homo sapiens
27 LTBP1 4052
Invivo Homo sapiens
Invitro Homo sapiens
28 TGFBR3 7049
Affinity Capture-Western Homo sapiens
29 VASN 114990
Reconstituted Complex Homo sapiens
30 MMP9 4318
Biochemical Activity Homo sapiens
31 BMP3 651
Invivo Homo sapiens
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