Gene description for ACBD5
Gene name acyl-CoA binding domain containing 5
Gene symbol ACBD5
Other names/aliases -
Species Homo sapiens
 Database cross references - ACBD5
ExoCarta ExoCarta_91452
Vesiclepedia VP_91452
Entrez Gene 91452
HGNC 23338
UniProt Q5T8D3  
 ACBD5 identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
 Gene ontology annotations for ACBD5
Molecular Function
    fatty-acyl-CoA binding GO:0000062 IBA
    protein binding GO:0005515 IPI
Biological Process
    pexophagy GO:0000425 IMP
    fatty acid metabolic process GO:0006631 IBA
Subcellular Localization
    nucleoplasm GO:0005654 IDA
    cytoplasm GO:0005737 IBA
    peroxisome GO:0005777 IBA
    peroxisome GO:0005777 IDA
    peroxisomal membrane GO:0005778 TAS
    cytosol GO:0005829 TAS
    membrane GO:0016020 HDA
 Experiment description of studies that identified ACBD5 in exosomes
1
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for ACBD5
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 SGTA 6449
Proximity Label-MS Homo sapiens
2 PEX13  
Proximity Label-MS Homo sapiens
3 AFG3L2 10939
Proximity Label-MS Homo sapiens
4 HSD17B11 51170
Proximity Label-MS Homo sapiens
5 ARHGAP1 392
Proximity Label-MS Homo sapiens
6 NECAB2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 MTCH1 23787
Proximity Label-MS Homo sapiens
8 UBL4A 8266
Proximity Label-MS Homo sapiens
9 RAB1A 5861
Proximity Label-MS Homo sapiens
10 VAPA 9218
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
11 METTL7A 25840
Proximity Label-MS Homo sapiens
12 LDHB 3945
Proximity Label-MS Homo sapiens
13 NFKB1 4790
Proximity Label-MS Homo sapiens
14 TMEM135  
Proximity Label-MS Homo sapiens
15 KLC3  
Affinity Capture-MS Homo sapiens
16 NUP62 23636
Proximity Label-MS Homo sapiens
17 KPNB1 3837
Proximity Label-MS Homo sapiens
18 CTDNEP1 23399
Proximity Label-MS Homo sapiens
19 EPS15 2060
Proximity Label-MS Homo sapiens
20 PIK3AP1  
Proximity Label-MS Homo sapiens
21 THOC7 80145
Proximity Label-MS Homo sapiens
22 DNAJC25 548645
Proximity Label-MS Homo sapiens
23 MYO5C 55930
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
24 PTPN1 5770
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
25 COPA 1314
Proximity Label-MS Homo sapiens
26 MARC2 54996
Proximity Label-MS Homo sapiens
27 SYNE2 23224
Proximity Label-MS Homo sapiens
28 TOMM22 56993
Proximity Label-MS Homo sapiens
29 RAB3B 5865
Proximity Label-MS Homo sapiens
30 MASTL  
Affinity Capture-MS Homo sapiens
31 FIS1 51024
Proximity Label-MS Homo sapiens
32 PCNT  
Proximity Label-MS Homo sapiens
33 SMCR8 140775
Proximity Label-MS Homo sapiens
34 DGKH 160851
Proximity Label-MS Homo sapiens
35 GRM2 2912
Two-hybrid Homo sapiens
36 SMPD4 55627
Proximity Label-MS Homo sapiens
37 DIAPH3 81624
Proximity Label-MS Homo sapiens
38 PEG10 23089
Proximity Label-MS Homo sapiens
39 ABCD3 5825
Proximity Label-MS Homo sapiens
40 PPP6R1 22870
Proximity Label-MS Homo sapiens
41 SSR1 6745
Proximity Label-MS Homo sapiens
42 MARCH5  
Proximity Label-MS Homo sapiens
43 PSMC2 5701
Proximity Label-MS Homo sapiens
44 UBQLN1 29979
Proximity Label-MS Homo sapiens
45 STIP1 10963
Proximity Label-MS Homo sapiens
46 PGRMC2 10424
Proximity Label-MS Homo sapiens
47 RPN2 6185
Proximity Label-MS Homo sapiens
48 EXD2  
Proximity Label-MS Homo sapiens
49 SLC25A46 91137
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
50 NGLY1 55768
Proximity Label-MS Homo sapiens
51 NAP1L4 4676
Proximity Label-MS Homo sapiens
52 SLC30A9 10463
Proximity Label-MS Homo sapiens
53 SNX7 51375
Proximity Label-MS Homo sapiens
54 MAVS 57506
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
55 FAF2 23197
Proximity Label-MS Homo sapiens
56 HK1 3098
Proximity Label-MS Homo sapiens
57 KIF3A 11127
Proximity Label-MS Homo sapiens
58 PSMC3 5702
Proximity Label-MS Homo sapiens
59 RAD23A 5886
Proximity Label-MS Homo sapiens
60 KIF14 9928
Affinity Capture-MS Homo sapiens
61 HSPA8 3312
Proximity Label-MS Homo sapiens
62 NUP155 9631
Proximity Label-MS Homo sapiens
63 PXMP2  
Proximity Label-MS Homo sapiens
64 RAB5A 5868
Proximity Label-MS Homo sapiens
65 C1orf86  
Proximity Label-MS Homo sapiens
66 EMD 2010
Proximity Label-MS Homo sapiens
67 PSMD4 5710
Proximity Label-MS Homo sapiens
68 TBKBP1  
Proximity Label-MS Homo sapiens
69 CEP192 55125
Proximity Label-MS Homo sapiens
70 NBR1 4077
Proximity Label-MS Homo sapiens
71 EXOC4 60412
Proximity Label-MS Homo sapiens
72 CDKAL1  
Proximity Label-MS Homo sapiens
73 PEX14 5195
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
74 KIF11 3832
Proximity Label-MS Homo sapiens
75 SPAG5 10615
Proximity Label-MS Homo sapiens
76 RPN1 6184
Proximity Label-MS Homo sapiens
77 ANAPC4 29945
Proximity Label-MS Homo sapiens
78 EIF3H 8667
Proximity Label-MS Homo sapiens
79 TMEM131  
Proximity Label-MS Homo sapiens
80 FLOT2 2319
Proximity Label-MS Homo sapiens
81 RHOT2 89941
Proximity Label-MS Homo sapiens
82 ELOVL5 60481
Proximity Label-MS Homo sapiens
83 SEC61B 10952
Proximity Label-MS Homo sapiens
84 FAM73B  
Proximity Label-MS Homo sapiens
85 RMDN3 55177
Proximity Label-MS Homo sapiens
86 SNAP29 9342
Proximity Label-MS Homo sapiens
87 Pcdh1  
Affinity Capture-MS Mus musculus
88 NCKAP5L  
Proximity Label-MS Homo sapiens
89 PPP2R3A  
Proximity Label-MS Homo sapiens
90 SEC63 11231
Proximity Label-MS Homo sapiens
91 CYB5B 80777
Proximity Label-MS Homo sapiens
92 NUPL1 9818
Proximity Label-MS Homo sapiens
93 VAPB 9217
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Proximity Label-MS Homo sapiens
94 TMEM159 57146
Proximity Label-MS Homo sapiens
95 PRDM11  
Affinity Capture-MS Homo sapiens
96 ZFPL1 7542
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
97 LRRC59 55379
Proximity Label-MS Homo sapiens
98 NELFCD 51497
Proximity Label-MS Homo sapiens
99 AKAP9 10142
Proximity Label-MS Homo sapiens
100 GOLT1B 51026
Affinity Capture-MS Homo sapiens
101 Rmdn3  
Affinity Capture-MS Mus musculus
102 NUP88 4927
Proximity Label-MS Homo sapiens
103 HSD3B7 80270
Proximity Label-MS Homo sapiens
104 ACTBL2 345651
Proximity Label-MS Homo sapiens
105 STIM1 6786
Proximity Label-MS Homo sapiens
106 FKBP8 23770
Proximity Label-MS Homo sapiens
107 PEX5 5830
Proximity Label-MS Homo sapiens
108 GPRASP2  
Proximity Label-MS Homo sapiens
109 OCIAD1 54940
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
110 NXF1 10482
Affinity Capture-RNA Homo sapiens
111 ACBD4  
Proximity Label-MS Homo sapiens
112 CDK5RAP2 55755
Proximity Label-MS Homo sapiens
113 PEX16 9409
Proximity Label-MS Homo sapiens
114 TMEM229B  
Two-hybrid Homo sapiens
115 RPA3 6119
Proximity Label-MS Homo sapiens
116 ATP2A1 487
Proximity Label-MS Homo sapiens
117 HSPA1A 3303
Proximity Label-MS Homo sapiens
118 NDC80 10403
Proximity Label-MS Homo sapiens
119 VRK2 7444
Proximity Label-MS Homo sapiens
120 IP6K1 9807
Proximity Label-MS Homo sapiens
121 DDRGK1 65992
Proximity Label-MS Homo sapiens
122 RMDN2 151393
Proximity Label-MS Homo sapiens
123 Nedd1  
Affinity Capture-MS Mus musculus
124 HAX1  
Proximity Label-MS Homo sapiens
125 N4BP2  
Proximity Label-MS Homo sapiens
126 PEX3 8504
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
127 AKAP1 8165
Proximity Label-MS Homo sapiens
128 UBXN4 23190
Proximity Label-MS Homo sapiens
129 UBE2J1 51465
Proximity Label-MS Homo sapiens
130 STUB1 10273
Proximity Label-MS Homo sapiens
131 GGA3 23163
Proximity Label-MS Homo sapiens
132 UBQLN4 56893
Proximity Label-MS Homo sapiens
133 FBXW11  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
134 ALDH3A2 224
Proximity Label-MS Homo sapiens
135 PEX11B 8799
Proximity Label-MS Homo sapiens
136 TTC1 7265
Proximity Label-MS Homo sapiens
137 MYL6 4637
Proximity Label-MS Homo sapiens
138 YTHDF2 51441
Proximity Label-MS Homo sapiens
139 TRPS1  
Proximity Label-MS Homo sapiens
140 WWOX 51741
Proximity Label-MS Homo sapiens
141 PEX19 5824
Proximity Label-MS Homo sapiens
142 DNAJA2 10294
Proximity Label-MS Homo sapiens
143 Cep135  
Affinity Capture-MS Mus musculus
144 EDEM1  
Affinity Capture-MS Homo sapiens
145 CFAP36 112942
Proximity Label-MS Homo sapiens
146 UBA52 7311
Proximity Label-MS Homo sapiens
147 PJA2  
Proximity Label-MS Homo sapiens
148 SLC38A7 55238
Two-hybrid Homo sapiens
149 YTHDF3  
Proximity Label-MS Homo sapiens
150 MMGT1 93380
Affinity Capture-MS Homo sapiens
151 AUP1 550
Proximity Label-MS Homo sapiens
152 TBK1 29110
Proximity Label-MS Homo sapiens
153 USP30  
Proximity Label-MS Homo sapiens
154 MAGED1 9500
Proximity Label-MS Homo sapiens
155 MOV10 4343
Affinity Capture-RNA Homo sapiens
156 BCL2  
Affinity Capture-MS Homo sapiens
157 SEC62 7095
Proximity Label-MS Homo sapiens
158 IPO4 79711
Proximity Label-MS Homo sapiens
159 RAB7A 7879
Proximity Label-MS Homo sapiens
160 YKT6 10652
Proximity Label-MS Homo sapiens
161 CNGA3  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
162 PRPF4 9128
Affinity Capture-MS Homo sapiens
163 DNAJC1 64215
Proximity Label-MS Homo sapiens
164 RAB5C 5878
Affinity Capture-MS Homo sapiens
165 PSMD1 5707
Proximity Label-MS Homo sapiens
166 CKAP4 10970
Proximity Label-MS Homo sapiens
167 ST13 6767
Proximity Label-MS Homo sapiens
168 PSMC4 5704
Proximity Label-MS Homo sapiens
169 FAM21A 387680
Proximity Label-MS Homo sapiens
170 C5orf22  
Proximity Label-MS Homo sapiens
171 KIAA0355 9710
Proximity Label-MS Homo sapiens
172 DERL1 79139
Proximity Label-MS Homo sapiens
173 CNTROB  
Proximity Label-MS Homo sapiens
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