Gene ontology annotations for NCK1
Experiment description of studies that identified NCK1 in exosomes
1
Experiment ID
207
ISEV standards
✔
EM
EV Biophysical techniques
✔
TSG101|HSP70
EV Cytosolic markers
✔
FLOT1
EV Membrane markers
✔
VDAC
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ.
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DKO-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
2
Experiment ID
208
ISEV standards
✔
EM
EV Biophysical techniques
✔
TSG101|HSP70
EV Cytosolic markers
✔
FLOT1
EV Membrane markers
✔
VDAC
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ.
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
Dks-8
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
3
Experiment ID
209
ISEV standards
✘
EV Biophysical techniques
✔
TSG101|HSP70
EV Cytosolic markers
✔
FLOT1
EV Membrane markers
✔
VDAC
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ.
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DLD-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
4
Experiment ID
231
ISEV standards
✘
EV Biophysical techniques
✔
Alix
EV Cytosolic markers
✔
CD63|CD9
EV Membrane markers
✘
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein Lipids
Methods used in the study
Western blotting Mass spectrometry
5
Experiment ID
232
ISEV standards
✘
EV Biophysical techniques
✘
EV Cytosolic markers
✘
EV Membrane markers
✘
EV Negative markers
✘
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
6
Experiment ID
233
ISEV standards
✘
EV Biophysical techniques
✘
EV Cytosolic markers
✘
EV Membrane markers
✘
EV Negative markers
✘
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 3
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for NCK1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
RASA1
5921
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
2
DOK2
9046
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
3
CSNK1G2
Affinity Capture-MS
Homo sapiens
4
PKN2
5586
Reconstituted Complex
Homo sapiens
5
PXN
Reconstituted Complex
Homo sapiens
6
EGFR
1956
Reconstituted Complex
Homo sapiens
7
RICS
Affinity Capture-Western
Homo sapiens
Reconstituted Complex
Homo sapiens
8
DAG1
1605
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
9
WIPF1
7456
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
10
EPHB1
2047
Two-hybrid
Homo sapiens
11
NCKAP1
10787
Two-hybrid
Homo sapiens
12
CAV2
858
Invivo
Homo sapiens
Affinity Capture-MS
Homo sapiens
13
EIF2B2
8892
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
14
SOCS1
Reconstituted Complex
Homo sapiens
15
BCAR1
9564
Invivo
Homo sapiens
16
TNK2
Affinity Capture-MS
Homo sapiens
17
FASLG
356
Invivo
Homo sapiens
18
ERBB4
2066
Affinity Capture-MS
Homo sapiens
19
ABL1
25
Invivo
Homo sapiens
20
MAP4K4
9448
Affinity Capture-Western
Homo sapiens
Reconstituted Complex
Homo sapiens
21
NCKIPSD
51517
Two-hybrid
Homo sapiens
22
Mta3
Reconstituted Complex
Mus musculus
23
MINK1
50488
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
24
DNM1
1759
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
25
CBLB
Affinity Capture-MS
Homo sapiens
26
EIF2S2
8894
Invivo
Homo sapiens
Invitro
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
27
SOCS7
Invitro
Homo sapiens
28
Mta1
Reconstituted Complex
Mus musculus
29
TBK1
29110
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
30
WAS
7454
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-MS
Homo sapiens
31
RRAS
6237
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
32
PTK2
5747
Reconstituted Complex
Homo sapiens
33
PDGFRB
5159
Affinity Capture-MS
Homo sapiens
34
NEDD9
4739
Affinity Capture-Western
Homo sapiens
Reconstituted Complex
Homo sapiens
35
LCP2
3937
Affinity Capture-MS
Homo sapiens
Affinity Capture-Western
Homo sapiens
Reconstituted Complex
Homo sapiens
36
DCC
Affinity Capture-Western
Homo sapiens
37
PAK1
Invitro
Homo sapiens
38
DRD4
Invivo
Homo sapiens
39
KHDRBS1
10657
Invivo
Homo sapiens
Invitro
Homo sapiens
Reconstituted Complex
Homo sapiens
40
BLNK
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
41
RAC1
5879
Invivo
Homo sapiens
Affinity Capture-MS
Homo sapiens
42
ABI1
10006
Two-hybrid
Homo sapiens
43
NTRK2
4915
Two-hybrid
Homo sapiens
44
SOS1
Invivo
Homo sapiens
Invitro
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Reconstituted Complex
Homo sapiens
45
CRK
1398
Reconstituted Complex
Homo sapiens
46
MAP4K1
Two-hybrid
Homo sapiens
47
WASL
8976
Far Western
Homo sapiens
Reconstituted Complex
Homo sapiens
View the network
image/svg+xml
Pathways in which NCK1 is involved