Gene description for ABLIM1
Gene name actin binding LIM protein 1
Gene symbol ABLIM1
Other names/aliases ABLIM
LIMAB1
LIMATIN
abLIM-1
Species Homo sapiens
 Database cross references - ABLIM1
ExoCarta ExoCarta_3983
Vesiclepedia VP_3983
Entrez Gene 3983
HGNC 78
MIM 602330
UniProt O14639  
 ABLIM1 identified in exosomes derived from the following tissue/cell type
Retinal pigment epithelial cells 35333565    
Retinal pigment epithelial cells 35333565    
 Gene ontology annotations for ABLIM1
Molecular Function
    actin binding GO:0003779 TAS
    protein binding GO:0005515 IPI
    metal ion binding GO:0046872 IEA
    actin filament binding GO:0051015 IBA
Biological Process
    cytoskeleton organization GO:0007010 IEA
    visual perception GO:0007601 TAS
    animal organ morphogenesis GO:0009887 TAS
    lamellipodium assembly GO:0030032 IBA
    lamellipodium assembly GO:0030032 IMP
    cilium assembly GO:0060271 IBA
    cilium assembly GO:0060271 IMP
Subcellular Localization
    stress fiber GO:0001725 IBA
    stress fiber GO:0001725 IDA
    cytoplasm GO:0005737 IEA
    actin cytoskeleton GO:0015629 IBA
    lamellipodium GO:0030027 IDA
 Experiment description of studies that identified ABLIM1 in exosomes
1
Experiment ID 834
MISEV standards
EM
Biophysical techniques
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35333565    
Organism Homo sapiens
Experiment description LAMP2A regulates the loading of proteins into exosomes
Authors "Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name Sci Adv
Publication year 2022
Sample Retinal pigment epithelial cells
Sample name ARPE-19
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 835
MISEV standards
EM
Biophysical techniques
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35333565    
Organism Homo sapiens
Experiment description LAMP2A regulates the loading of proteins into exosomes
Authors "Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name Sci Adv
Publication year 2022
Sample Retinal pigment epithelial cells
Sample name ARPE-19
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
 Protein-protein interactions for ABLIM1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 UBE2H 7328
Affinity Capture-MS Homo sapiens
2 LUZP4  
Affinity Capture-MS Homo sapiens
3 PPP1CB 5500
Affinity Capture-MS Homo sapiens
4 OCLN 100506658
Proximity Label-MS Homo sapiens
5 MARCKS 4082
Proximity Label-MS Homo sapiens
6 CAPZA2 830
Affinity Capture-MS Homo sapiens
7 BEGAIN  
Two-hybrid Homo sapiens
8 YWHAE 7531
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
9 Calml3  
Affinity Capture-MS Mus musculus
10 GFAP 2670
Proximity Label-MS Homo sapiens
11 BCO1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
12 KIF20A 10112
Affinity Capture-MS Homo sapiens
13 CBY1  
Affinity Capture-MS Homo sapiens
14 Actb 11461
Affinity Capture-MS Mus musculus
15 APP 351
Reconstituted Complex Homo sapiens
16 RDX 5962
Proximity Label-MS Homo sapiens
17 IQGAP1 8826
Affinity Capture-MS Homo sapiens
18 YWHAG 7532
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
19 Flot2 14252
Affinity Capture-MS Mus musculus
20 USHBP1  
Two-hybrid Homo sapiens
21 Tpm1 22003
Affinity Capture-MS Mus musculus
22 YWHAH 7533
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
23 ATG16L1 55054
Affinity Capture-MS Homo sapiens
24 SFN 2810
Affinity Capture-MS Homo sapiens
25 MPP2 4355
Affinity Capture-MS Homo sapiens
26 SNX27 81609
Affinity Capture-MS Homo sapiens
27 NMT1 4836
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
28 CARD9 64170
Two-hybrid Homo sapiens
29 Cobll1 319876
Affinity Capture-MS Mus musculus
30 Lima1  
Affinity Capture-MS Mus musculus
31 ABRA  
Affinity Capture-Western Homo sapiens
32 KIF14 9928
Affinity Capture-MS Homo sapiens
33 YWHAB 7529
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 PFN1 5216
Proximity Label-MS Homo sapiens
35 CHMP4C 92421
Affinity Capture-MS Homo sapiens
36 RNF6  
Affinity Capture-MS Homo sapiens
37 MYO18A 399687
Affinity Capture-MS Homo sapiens
38 VAV1 7409
Affinity Capture-MS Homo sapiens
39 PRPH 5630
Proximity Label-MS Homo sapiens
40 ABCE1 6059
Affinity Capture-MS Homo sapiens
41 CYB5D2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
42 LYN 4067
Proximity Label-MS Homo sapiens
43 MAPRE1 22919
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
44 GOLGA2 2801
Two-hybrid Homo sapiens
45 Vav2  
Affinity Capture-MS Mus musculus
46 CDH1 999
Proximity Label-MS Homo sapiens
47 CHMP4B 128866
Affinity Capture-MS Homo sapiens
48 SREBF2 6721
Two-hybrid Homo sapiens
49 BTF3 689
Affinity Capture-MS Homo sapiens
50 MYH9 4627
Affinity Capture-MS Homo sapiens
51 LIN7C 55327
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
52 YWHAQ 10971
Affinity Capture-MS Homo sapiens
53 ACTB 60
Proximity Label-MS Homo sapiens
Reconstituted Complex Homo sapiens
54 ARHGEF6 9459
Affinity Capture-MS Homo sapiens
55 APBA1  
Affinity Capture-MS Homo sapiens
56 Coro1c 23790
Affinity Capture-MS Mus musculus
57 DBN1 1627
Affinity Capture-MS Homo sapiens
58 CYLD  
Affinity Capture-MS Homo sapiens
59 ASB18  
Affinity Capture-MS Homo sapiens
60 ANLN 54443
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
61 LIMA1 51474
Affinity Capture-MS Homo sapiens
62 CALCOCO2  
Two-hybrid Homo sapiens
63 Myh9 17886
Affinity Capture-MS Mus musculus
64 FLNA 2316
Affinity Capture-MS Homo sapiens
65 DOCK8 81704
Affinity Capture-MS Homo sapiens
66 XPO1 7514
Affinity Capture-MS Homo sapiens
67 ECT2 1894
Affinity Capture-MS Homo sapiens
68 SH2D1B  
Affinity Capture-MS Homo sapiens
69 EPB41L4A 64097
Proximity Label-MS Homo sapiens
70 CUL3 8452
Affinity Capture-MS Homo sapiens
71 YWHAZ 7534
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
72 MYO19  
Affinity Capture-MS Homo sapiens
73 SUZ12  
Affinity Capture-MS Homo sapiens
74 MYO1C 4641
Affinity Capture-MS Homo sapiens
75 CDK2 1017
Affinity Capture-MS Homo sapiens
76 LDOC1  
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
77 SYNPO 11346
Affinity Capture-MS Homo sapiens
78 Flnb 286940
Affinity Capture-MS Mus musculus
79 MYC  
Affinity Capture-MS Homo sapiens
80 WWC1  
Affinity Capture-MS Homo sapiens
81 HOOK2  
Two-hybrid Homo sapiens
82 KRT15 3866
Two-hybrid Homo sapiens
83 RICTOR 253260
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
84 RHOB 388
Proximity Label-MS Homo sapiens
85 Ppp1cb 19046
Affinity Capture-MS Mus musculus
86 FLOT1 10211
Proximity Label-MS Homo sapiens
87 CCDC8  
Affinity Capture-MS Homo sapiens
88 RNF43  
Proximity Label-MS Homo sapiens
89 PDLIM7 9260
Affinity Capture-MS Homo sapiens
90 Tmod3 50875
Affinity Capture-MS Mus musculus
91 TRAF2 7186
Two-hybrid Homo sapiens
92 PARP1 142
Proximity Label-MS Homo sapiens
93 ADAT3 113179
Affinity Capture-MS Homo sapiens
94 WDR77 79084
Affinity Capture-MS Homo sapiens
95 PTPRD 5789
Reconstituted Complex Homo sapiens
96 EZR 7430
Proximity Label-MS Homo sapiens
97 Myo1c 17913
Affinity Capture-MS Mus musculus
98 CASK 8573
Affinity Capture-MS Homo sapiens
99 SQSTM1 8878
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
100 SEPSECS  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
101 MAPRE3  
Proximity Label-MS Homo sapiens
102 KLHL40  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
103 C11orf52 91894
Proximity Label-MS Homo sapiens
104 Myh10 77579
Affinity Capture-MS Mus musculus
105 MED21  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
106 BCL2L1 598
Affinity Capture-MS Homo sapiens
107 C16orf72 29035
Affinity Capture-MS Homo sapiens
108 PXN 5829
Proximity Label-MS Homo sapiens
109 TSC22D4 81628
Two-hybrid Homo sapiens
110 EPHA2 1969
Proximity Label-MS Homo sapiens
111 KRAS 3845
Proximity Label-MS Homo sapiens
112 VIM 7431
Two-hybrid Homo sapiens
113 Kif1c  
Affinity Capture-MS Mus musculus
114 Sept9  
Affinity Capture-MS Mus musculus
115 KCNJ12 3768
Affinity Capture-MS Homo sapiens
116 Vbp1  
Affinity Capture-MS Mus musculus
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