Gene ontology annotations for TSPAN3
Experiment description of studies that identified TSPAN3 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
494
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD151|CD63|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
Osteoarthritic cartilage
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
6
Experiment ID
496
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
Healthy cartilage
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
7
Experiment ID
497
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
8
Experiment ID
498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
9
Experiment ID
254
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
MNT-1
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
10
Experiment ID
255
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
G1
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
11
Experiment ID
256
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
501mel
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
12
Experiment ID
63
MISEV standards
✘
Biophysical techniques
✔
AQP2
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19056867
Organism
Homo sapiens
Experiment description
Large-scale proteomics and phosphoproteomics of urinary exosomes.
Authors
"Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA"
Journal name
JASN
Publication year
2009
Sample
Urine
Sample name
Urine - Normal
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LTQ] Western blotting
Protein-protein interactions for TSPAN3
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
RNF149
284996
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
2
GPM6A
2823
Affinity Capture-MS
Homo sapiens
3
C5AR1
Affinity Capture-MS
Homo sapiens
4
NOTCH3
4854
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
OR10H1
Affinity Capture-MS
Homo sapiens
6
LGALS9C
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
7
BSCL2
Affinity Capture-MS
Homo sapiens
8
IFNGR1
3459
Affinity Capture-MS
Homo sapiens
9
GPR114
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
10
TNFSF18
8995
Affinity Capture-MS
Homo sapiens
11
LRP10
26020
Affinity Capture-MS
Homo sapiens
12
GOLGA7
51125
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
13
MAOB
Affinity Capture-MS
Homo sapiens
14
TMEM181
57583
Affinity Capture-MS
Homo sapiens
15
TM9SF4
9777
Affinity Capture-MS
Homo sapiens
16
CLEC2B
Affinity Capture-MS
Homo sapiens
17
SRC
6714
Affinity Capture-MS
Homo sapiens
18
EWSR1
2130
Two-hybrid
Homo sapiens
19
PLD2
5338
Affinity Capture-MS
Homo sapiens
20
STX6
10228
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
21
F2RL1
Affinity Capture-MS
Homo sapiens
22
LGALS9
3965
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
23
SDCBP
6386
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
24
ATP13A3
79572
Affinity Capture-MS
Homo sapiens
25
RXFP4
Two-hybrid
Homo sapiens
26
FGFR1
2260
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
27
CLGN
1047
Affinity Capture-MS
Homo sapiens
28
GPR17
2840
Affinity Capture-MS
Homo sapiens
29
ZDHHC9
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
30
NDFIP1
80762
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
31
MANSC1
54682
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
32
BNIP1
662
Affinity Capture-MS
Homo sapiens
33
TMX1
81542
Affinity Capture-MS
Homo sapiens
34
TSPAN2
10100
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
35
KRTCAP3
200634
Affinity Capture-MS
Homo sapiens
36
KDSR
2531
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
37
ACVR1B
91
Affinity Capture-MS
Homo sapiens
38
GABARAP
11337
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
39
S1PR1
1901
Affinity Capture-MS
Homo sapiens
40
ARL17A
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
41
TRIM32
22954
Affinity Capture-MS
Homo sapiens
42
RNF13
11342
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
43
CD63
967
Affinity Capture-MS
Homo sapiens
44
TMEM171
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
45
LRRC8B
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
46
ZDHHC20
253832
Affinity Capture-MS
Homo sapiens
47
CSNK1G3
1456
Affinity Capture-MS
Homo sapiens
48
FAM189B
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
49
CD320
51293
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
50
TRHDE
29953
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
51
GPR141
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
52
RDH14
57665
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
53
MC4R
Two-hybrid
Homo sapiens
54
NDFIP2
54602
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
55
FIBCD1
Affinity Capture-MS
Homo sapiens
56
TMEM246
84302
Affinity Capture-MS
Homo sapiens
57
OPRL1
4987
Affinity Capture-MS
Homo sapiens
58
PI4K2A
55361
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
59
LPAR1
1902
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
60
FGFR2
2263
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
61
SNX17
9784
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
62
GPR21
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
63
EFNB2
1948
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
64
DRD2
Two-hybrid
Homo sapiens
65
SFT2D1
113402
Affinity Capture-MS
Homo sapiens
66
TACR1
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
67
RHBDF2
79651
Affinity Capture-MS
Homo sapiens
68
TP53
7157
Affinity Capture-MS
Homo sapiens
69
EPHA4
2043
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
70
ABCG8
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
71
TMEM30B
161291
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
72
TSPAN15
23555
Affinity Capture-MS
Homo sapiens
73
LMAN2L
81562
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
74
CDC6
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
75
CACNG6
Affinity Capture-MS
Homo sapiens
76
UGCG
7357
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
77
AGPAT3
56894
Affinity Capture-MS
Homo sapiens
78
GPRC5D
Affinity Capture-MS
Homo sapiens
79
LTB4R2
Two-hybrid
Homo sapiens
80
AUP1
550
Affinity Capture-MS
Homo sapiens
81
VAMP7
6845
Affinity Capture-MS
Homo sapiens
82
EPHA5
2044
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
83
TNFRSF10B
8795
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
84
BRICD5
Affinity Capture-MS
Homo sapiens
85
DAGLB
221955
Affinity Capture-MS
Homo sapiens
86
SPPL2B
56928
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
87
EMC7
56851
Affinity Capture-MS
Homo sapiens
88
RAB13
5872
Affinity Capture-MS
Homo sapiens
89
CC2D1A
54862
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
90
LGALS3
3958
Affinity Capture-MS
Homo sapiens
91
CCR6
Affinity Capture-MS
Homo sapiens
92
ADIPOR1
51094
Affinity Capture-MS
Homo sapiens
93
SCAMP3
10067
Affinity Capture-MS
Homo sapiens
94
MAP1LC3B2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which TSPAN3 is involved
No pathways found