Experiment description of studies that identified PDZK1IP1 in exosomes

1 Experiment ID 622 MISEV standards ✔ EM Biophysical techniques Enriched markers ✔ GOLGA2|CYC1 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 29339034     Organism Homo sapiens Experiment description Extracellular matrix proteins and carcinoembryonic antigen-related cell adhesion molecules characterize pancreatic duct fluid exosomes in patients with pancreatic cancer Authors "Zheng J, Hernandez JM, Doussot A, Bojmar L, Zambirinis CP, Costa-Silva B, van Beek EJAH, Mark MT, Molina H, Askan G, Basturk O, Gonen M, Kingham TP, Allen PJ, D'Angelica MI, DeMatteo RP, Lyden D, Jarnagin WR." Journal name HPB Publication year 2018 Sample Pancreatic duct fluid Sample name From patients with Pancreatic ductal adenocarcinoma Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

2 Experiment ID 623 MISEV standards ✘ Biophysical techniques Enriched markers ✔ GOLGA2|CYC1 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 29339034     Organism Homo sapiens Experiment description Extracellular matrix proteins and carcinoembryonic antigen-related cell adhesion molecules characterize pancreatic duct fluid exosomes in patients with pancreatic cancer Authors "Zheng J, Hernandez JM, Doussot A, Bojmar L, Zambirinis CP, Costa-Silva B, van Beek EJAH, Mark MT, Molina H, Askan G, Basturk O, Gonen M, Kingham TP, Allen PJ, D'Angelica MI, DeMatteo RP, Lyden D, Jarnagin WR." Journal name HPB Publication year 2018 Sample Pancreatic duct fluid Sample name From patients with IPMN with microinvasive cancer (IPMNca) Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

3 Experiment ID 625 MISEV standards ✘ Biophysical techniques Enriched markers ✔ GOLGA2|CYC1 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 29339034     Organism Homo sapiens Experiment description Extracellular matrix proteins and carcinoembryonic antigen-related cell adhesion molecules characterize pancreatic duct fluid exosomes in patients with pancreatic cancer Authors "Zheng J, Hernandez JM, Doussot A, Bojmar L, Zambirinis CP, Costa-Silva B, van Beek EJAH, Mark MT, Molina H, Askan G, Basturk O, Gonen M, Kingham TP, Allen PJ, D'Angelica MI, DeMatteo RP, Lyden D, Jarnagin WR." Journal name HPB Publication year 2018 Sample Pancreatic duct fluid Sample name From patients with benign pancreatic disease Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

4 Experiment ID 13 MISEV standards ✔ IEM Biophysical techniques ✔ Alix|RAB4|RAB5B|RAB11|TSG101|CD9|AQP2|AQP1 Enriched markers ✘ Negative markers ✘ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 15326289     Organism Homo sapiens Experiment description Identification and proteomic profiling of exosomes in human urine. Authors "Pisitkun T, Shen RF, Knepper MA" Journal name PNAS Publication year 2004 Sample Urine Sample name Urine - Normal Isolation/purification methods Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry [LCQ DECA XP] Western blotting

5 Experiment ID 63 MISEV standards ✘ Biophysical techniques ✔ AQP2 Enriched markers ✘ Negative markers ✘ Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 19056867     Organism Homo sapiens Experiment description Large-scale proteomics and phosphoproteomics of urinary exosomes. Authors "Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA" Journal name JASN Publication year 2009 Sample Urine Sample name Urine - Normal Isolation/purification methods Differential centrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry [LTQ] Western blotting

Protein-protein interactions for PDZK1IP1

Protein Interactor ExoCarta ID Identification method PubMed Species 1 AQP2 359 Two-hybrid Homo sapiens 2 EMC6 83460 Two-hybrid Homo sapiens 3 GYPA   Two-hybrid Homo sapiens 4 TMEM14C 51522 Two-hybrid Homo sapiens 5 TMEM107 84314 Two-hybrid Homo sapiens 6 PEX16 9409 Two-hybrid Homo sapiens 7 CYB5B 80777 Two-hybrid Homo sapiens 8 UTP14A 10813 Two-hybrid Homo sapiens 9 UPK1B 7348 Two-hybrid Homo sapiens 10 SLC35B1 10237 Two-hybrid Homo sapiens 11 MIP   Two-hybrid Homo sapiens 12 STX12 23673 Two-hybrid Homo sapiens 13 C14orf1 11161 Two-hybrid Homo sapiens 14 TMEM39B   Two-hybrid Homo sapiens 15 YIPF6 286451 Two-hybrid Homo sapiens 16 RTP2   Two-hybrid Homo sapiens 17 THBD 7056 Two-hybrid Homo sapiens 18 COPS6 10980 Two-hybrid Homo sapiens 19 ZDHHC17 23390 Two-hybrid Homo sapiens 20 LOC100507537   Two-hybrid Homo sapiens 21 ASGR1 432 Two-hybrid Homo sapiens 22 FCER1G 2207 Two-hybrid Homo sapiens 23 FAM3C 10447 Two-hybrid Homo sapiens 24 GAST   Two-hybrid Homo sapiens 25 TMEM14B   Two-hybrid Homo sapiens 26 ICMT   Two-hybrid Homo sapiens 27 TMEM203   Two-hybrid Homo sapiens 28 PPAPDC1A   Two-hybrid Homo sapiens 29 AIG1   Two-hybrid Homo sapiens 30 NSG1   Two-hybrid Homo sapiens 31 IGFBP5 3488 Two-hybrid Homo sapiens 32 TMEM11 8834 Two-hybrid Homo sapiens 33 JAGN1 84522 Two-hybrid Homo sapiens 34 MYADML2   Two-hybrid Homo sapiens 35 APOD 347 Two-hybrid Homo sapiens 36 TRIM54   Two-hybrid Homo sapiens 37 MYADM 91663 Two-hybrid Homo sapiens 38 SFTPC   Two-hybrid Homo sapiens 39 AGR3 155465 Two-hybrid Homo sapiens 40 CD81 975 Two-hybrid Homo sapiens 41 ARL13B 200894 Two-hybrid Homo sapiens 42 TNFRSF10C   Two-hybrid Homo sapiens 43 NUMB 8650 Two-hybrid Homo sapiens 44 SDCBP 6386 Two-hybrid Homo sapiens 45 RPRM   Two-hybrid Homo sapiens 46 APOA2 336 Two-hybrid Homo sapiens 47 TMEM109 79073 Two-hybrid Homo sapiens 48 GRM2 2912 Two-hybrid Homo sapiens 49 SFXN2   Two-hybrid Homo sapiens 50 TMEM86A   Two-hybrid Homo sapiens 51 PMP22   Two-hybrid Homo sapiens 52 PGAP2   Two-hybrid Homo sapiens 53 TMEM65 157378 Two-hybrid Homo sapiens 54 GALNT15   Two-hybrid Homo sapiens 55 PLP2 5355 Two-hybrid Homo sapiens 56 C2CD2L 9854 Two-hybrid Homo sapiens 57 PPAPDC2   Two-hybrid Homo sapiens 58 C14orf180   Two-hybrid Homo sapiens 59 PDZK1 5174 Two-hybrid Homo sapiens Reconstituted Complex Homo sapiens Reconstituted Complex Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-Western Homo sapiens Two-hybrid Homo sapiens Two-hybrid Homo sapiens 60 CLDN19   Two-hybrid Homo sapiens 61 LHFPL5   Two-hybrid Homo sapiens 62 C17orf62 79415 Two-hybrid Homo sapiens 63 TSPO2   Two-hybrid Homo sapiens 64 SLC35B4   Two-hybrid Homo sapiens 65 GIMAP5   Two-hybrid Homo sapiens 66 CES1   Two-hybrid Homo sapiens 67 TMEM97 27346 Two-hybrid Homo sapiens 68 TUSC5   Two-hybrid Homo sapiens 69 TMEM140   Two-hybrid Homo sapiens 70 LEPROTL1 23484 Two-hybrid Homo sapiens View the network

Pathways in which PDZK1IP1 is involved

No pathways found