Gene ontology annotations for USP24
Experiment description of studies that identified USP24 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
497
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
6
Experiment ID
498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
7
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
8
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for USP24
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
ZRANB1
54764
Affinity Capture-MS
Homo sapiens
2
GYPA
Affinity Capture-MS
Homo sapiens
3
HNRNPD
3184
Affinity Capture-MS
Homo sapiens
4
LYPD3
27076
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
6
GPR17
2840
Affinity Capture-MS
Homo sapiens
7
VIPR2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
8
CYB5B
80777
Affinity Capture-MS
Homo sapiens
9
SERBP1
26135
Affinity Capture-MS
Homo sapiens
10
CXCR4
7852
Affinity Capture-MS
Homo sapiens
11
SPSB4
Affinity Capture-MS
Homo sapiens
12
SLC35G1
Affinity Capture-MS
Homo sapiens
13
TP53
7157
Biochemical Activity
Homo sapiens
14
IFT20
90410
Affinity Capture-MS
Homo sapiens
15
FPR1
Affinity Capture-MS
Homo sapiens
16
HCST
Affinity Capture-MS
Homo sapiens
17
SIRT7
Affinity Capture-MS
Homo sapiens
18
COPS7B
64708
Co-fractionation
Homo sapiens
19
RPA2
6118
Proximity Label-MS
Homo sapiens
20
NPTN
27020
Affinity Capture-MS
Homo sapiens
21
C19orf38
Affinity Capture-MS
Homo sapiens
22
RP2
6102
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
23
CPNE2
221184
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
24
IGHM
3507
Affinity Capture-MS
Homo sapiens
25
SYMPK
8189
Co-fractionation
Homo sapiens
26
CHRM4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
27
Oxnad1
Affinity Capture-MS
Mus musculus
28
NR3C1
2908
Proximity Label-MS
Homo sapiens
29
CNOT2
Affinity Capture-MS
Homo sapiens
30
DDB2
Two-hybrid
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Biochemical Activity
Homo sapiens
31
UBC
7316
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
32
CSNK2A1
1457
Biochemical Activity
Homo sapiens
33
GPR182
Affinity Capture-MS
Homo sapiens
34
PIBF1
Affinity Capture-MS
Homo sapiens
35
CUL3
8452
Affinity Capture-MS
Homo sapiens
36
GPRC5D
Affinity Capture-MS
Homo sapiens
37
TAGLN
6876
Affinity Capture-MS
Homo sapiens
38
ZEB1
Affinity Capture-MS
Homo sapiens
39
HTT
3064
Co-fractionation
Homo sapiens
40
WWP2
11060
Affinity Capture-MS
Homo sapiens
41
HIF1AN
55662
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
42
B3GAT1
Affinity Capture-MS
Homo sapiens
43
FIS1
51024
Affinity Capture-MS
Homo sapiens
44
C3orf18
Affinity Capture-MS
Homo sapiens
45
RPA3
6119
Proximity Label-MS
Homo sapiens
46
MYH6
4624
Affinity Capture-MS
Homo sapiens
47
Elavl1
15568
Affinity Capture-MS
Mus musculus
48
ARRB1
408
Affinity Capture-MS
Homo sapiens
49
XYLT1
64131
Affinity Capture-MS
Homo sapiens
50
CMTM5
Affinity Capture-MS
Homo sapiens
51
GOLGA1
Proximity Label-MS
Homo sapiens
52
HSPA1A
3303
Affinity Capture-MS
Homo sapiens
53
DHX34
9704
Affinity Capture-MS
Homo sapiens
54
Cdc6
23834
Affinity Capture-MS
Mus musculus
55
JUNB
Reconstituted Complex
Homo sapiens
56
NCS1
23413
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
57
SUV39H1
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
58
BMX
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
59
FAM168A
Affinity Capture-MS
Homo sapiens
60
FOXK1
221937
Co-fractionation
Homo sapiens
61
GSDMB
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
62
HMGA1
3159
Affinity Capture-MS
Homo sapiens
63
SLC33A1
9197
Affinity Capture-MS
Homo sapiens
64
CDC5L
988
Affinity Capture-MS
Homo sapiens
65
PPIF
10105
Cross-Linking-MS (XL-MS)
Homo sapiens
66
RHOJ
57381
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
67
HYPM
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which USP24 is involved