Gene description for Rpl39
Gene name ribosomal protein L39
Gene symbol Rpl39
Other names/aliases 2810465O16Rik
Species Mus musculus
 Database cross references - Rpl39
ExoCarta ExoCarta_67248
Vesiclepedia VP_67248
Entrez Gene 67248
UniProt P62892  
 Rpl39 identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Rpl39
Molecular Function
    structural constituent of ribosome GO:0003735 IDA
    structural constituent of ribosome GO:0003735 ISO
    protein binding GO:0005515 IPI
Biological Process
    cytoplasmic translation GO:0002181 IMP
    cytoplasmic translation GO:0002181 ISO
    cytoplasmic translation GO:0002181 NAS
    innate immune response in mucosa GO:0002227 ISO
    antibacterial humoral response GO:0019731 ISO
    defense response to Gram-positive bacterium GO:0050830 ISO
    antimicrobial humoral immune response mediated by antimicrobial peptide GO:0061844 ISO
Subcellular Localization
    extracellular space GO:0005615 ISO
    cytoplasm GO:0005737 IDA
    cytosol GO:0005829 TAS
    cytosolic large ribosomal subunit GO:0022625 IBA
    cytosolic large ribosomal subunit GO:0022625 IDA
    cytosolic large ribosomal subunit GO:0022625 IPI
    cytosolic large ribosomal subunit GO:0022625 ISO
    cytosolic ribosome GO:0022626 ISO
 Experiment description of studies that identified Rpl39 in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Rpl39
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Rpl11 67025
Co-fractionation Mus musculus
2 Rpl31 114641
Co-fractionation Mus musculus
3 Rps25 75617
Co-fractionation Mus musculus
4 Rps10 67097
Co-fractionation Mus musculus
5 Rpl13a 22121
Co-fractionation Mus musculus
6 Rps4x 20102
Co-fractionation Mus musculus
7 Rpl14 67115
Co-fractionation Mus musculus
8 Rps2 16898
Co-fractionation Mus musculus
9 Rps8 20116
Co-fractionation Mus musculus
10 Rps23 66475
Co-fractionation Mus musculus
11 Rpl7a 27176
Co-fractionation Mus musculus
12 Rps28 54127
Co-fractionation Mus musculus
13 Rpl24 68193
Co-fractionation Mus musculus
14 Rpl22 19934
Co-fractionation Mus musculus
15 Rpl4 67891
Co-fractionation Mus musculus
16 Eef2 13629
Co-fractionation Mus musculus
17 Rpl7 19989
Co-fractionation Mus musculus
18 Eef1a1 13627
Co-fractionation Mus musculus
19 Rpl26 19941
Co-fractionation Mus musculus
20 Rpl13 270106
Co-fractionation Mus musculus
21 Rplp0 11837
Co-fractionation Mus musculus
22 Rpl23a 268449
Co-fractionation Mus musculus
23 Rps14 20044
Co-fractionation Mus musculus
24 Rpl30 19946
Co-fractionation Mus musculus
25 Eed  
Affinity Capture-MS Mus musculus
26 Rpl15 66480
Co-fractionation Mus musculus
27 Rpl5 100503670
Co-fractionation Mus musculus
28 Hnrnpa2b1 53379
Co-fractionation Mus musculus
29 Rpl6 19988
Co-fractionation Mus musculus
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