Gene ontology annotations for TMBIM6
Experiment description of studies that identified TMBIM6 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
254
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
MNT-1
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
255
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
G1
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
256
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
501mel
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
257
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
Daju
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
9
Experiment ID
260
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|FLOT1|CD81
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25950383
Organism
Homo sapiens
Experiment description
Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors
"Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L"
Journal name
Pigment Cell Melanoma Res
Publication year
2015
Sample
Melanoma cells
Sample name
1205Lu
Isolation/purification methods
Differential centrifugation Unltracentrifugation Sucrose density gradient
Flotation density
1.13 - 1.19 g/mL
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
Protein-protein interactions for TMBIM6
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
GPR151
Two-hybrid
Homo sapiens
2
JSRP1
Two-hybrid
Homo sapiens
3
ATG9A
79065
Affinity Capture-MS
Homo sapiens
4
KIAA2013
90231
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
GLP1R
PCA
Homo sapiens
6
PI16
Two-hybrid
Homo sapiens
7
CD79A
Two-hybrid
Homo sapiens
8
FFAR1
Affinity Capture-MS
Homo sapiens
9
GJB4
Two-hybrid
Homo sapiens
10
MS4A3
Two-hybrid
Homo sapiens
11
SERINC2
347735
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
GPHB5
Two-hybrid
Homo sapiens
13
UGT2B11
Two-hybrid
Homo sapiens
14
RNF5
Affinity Capture-MS
Homo sapiens
15
TREML1
340205
Two-hybrid
Homo sapiens
16
LIME1
54923
Two-hybrid
Homo sapiens
17
OPRM1
4988
Two-hybrid
Homo sapiens
18
SLAMF6
114836
Two-hybrid
Homo sapiens
19
MANBAL
63905
Two-hybrid
Homo sapiens
20
HIATL1
84641
Two-hybrid
Homo sapiens
21
ST8SIA4
7903
Affinity Capture-MS
Homo sapiens
22
IL17RC
84818
Affinity Capture-MS
Homo sapiens
23
GPX8
493869
Two-hybrid
Homo sapiens
24
SYT9
143425
Two-hybrid
Homo sapiens
25
SLC12A7
10723
Two-hybrid
Homo sapiens
26
BFAR
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
27
VTI1A
143187
Two-hybrid
Homo sapiens
28
CLDN22
Two-hybrid
Homo sapiens
29
SYNGR1
9145
Affinity Capture-MS
Homo sapiens
30
HERPUD2
Two-hybrid
Homo sapiens
31
RNFT1
Affinity Capture-MS
Homo sapiens
32
PARK2
Affinity Capture-MS
Homo sapiens
33
RHBDL2
Two-hybrid
Homo sapiens
34
GPR35
Affinity Capture-MS
Homo sapiens
35
CERS2
29956
Two-hybrid
Homo sapiens
36
CLCC1
23155
Affinity Capture-MS
Homo sapiens
37
ODF4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
38
SLC7A1
6541
Two-hybrid
Homo sapiens
39
LYPD1
Affinity Capture-MS
Homo sapiens
40
TMEM63A
9725
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
41
GZMK
Two-hybrid
Homo sapiens
42
CD300LG
Two-hybrid
Homo sapiens
43
SCN3B
Two-hybrid
Homo sapiens
44
TRPM8
Affinity Capture-MS
Homo sapiens
45
TMUB1
Two-hybrid
Homo sapiens
46
TMCO3
55002
Affinity Capture-MS
Homo sapiens
47
KCNC1
Two-hybrid
Homo sapiens
48
CHRND
Affinity Capture-MS
Homo sapiens
49
PCDHA8
Affinity Capture-MS
Homo sapiens
50
CLEC5A
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
51
GJA8
Two-hybrid
Homo sapiens
52
EXD3
Affinity Capture-MS
Homo sapiens
53
GJA5
2702
Two-hybrid
Homo sapiens
54
HSD11B1
3290
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
55
LRRC59
55379
Two-hybrid
Homo sapiens
56
RNF170
81790
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
57
SLC41A3
54946
Two-hybrid
Homo sapiens
58
NELFCD
51497
Affinity Capture-MS
Homo sapiens
59
ESAM
90952
Two-hybrid
Homo sapiens
60
CHST8
64377
Affinity Capture-MS
Homo sapiens
61
HTR2C
Two-hybrid
Homo sapiens
62
IER3
Two-hybrid
Homo sapiens
63
CREB3L1
Two-hybrid
Homo sapiens
64
FAM209A
200232
Two-hybrid
Homo sapiens
65
EMR4P
Affinity Capture-MS
Homo sapiens
66
MAPK6
Affinity Capture-MS
Homo sapiens
67
GPR42
Two-hybrid
Homo sapiens
68
SIT1
27240
Two-hybrid
Homo sapiens
69
MPPE1
65258
Affinity Capture-MS
Homo sapiens
70
RNF185
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
71
OSBPL8
114882
Affinity Capture-MS
Homo sapiens
72
HFE2
Two-hybrid
Homo sapiens
73
TMX2
51075
Two-hybrid
Homo sapiens
74
C5orf46
389336
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
75
CD99L2
83692
Two-hybrid
Homo sapiens
76
GYPA
Two-hybrid
Homo sapiens
77
ADORA2B
Affinity Capture-MS
Homo sapiens
78
TRIM13
Affinity Capture-MS
Homo sapiens
79
EDNRA
1909
Affinity Capture-MS
Homo sapiens
80
HLA-DMB
3109
Affinity Capture-MS
Homo sapiens
81
SOAT2
Two-hybrid
Homo sapiens
82
VAC14
55697
Affinity Capture-MS
Homo sapiens
83
DUSP3
1845
Affinity Capture-MS
Homo sapiens
84
ASIC4
Affinity Capture-MS
Homo sapiens
85
TEX29
Two-hybrid
Homo sapiens
86
EBP
Two-hybrid
Homo sapiens
87
REEP2
Two-hybrid
Homo sapiens
88
MMGT1
93380
Two-hybrid
Homo sapiens
89
FERD3L
Two-hybrid
Homo sapiens
90
BCL2
Affinity Capture-MS
Homo sapiens
Affinity Capture-Western
Homo sapiens
91
KCNA10
Two-hybrid
Homo sapiens
92
SPPL2B
56928
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
93
ADAM33
80332
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
94
POMK
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
95
MARCH4
Affinity Capture-MS
Homo sapiens
96
VIPR1
Affinity Capture-MS
Homo sapiens
97
COX7C
1350
Affinity Capture-MS
Homo sapiens
98
C9orf72
Affinity Capture-MS
Homo sapiens
99
TMEM31
Two-hybrid
Homo sapiens
100
PIANP
Two-hybrid
Homo sapiens
101
SLC1A1
6505
Affinity Capture-MS
Homo sapiens
102
FGFBP2
Two-hybrid
Homo sapiens
103
STEAP1B
Two-hybrid
Homo sapiens
104
ATP13A1
57130
Two-hybrid
Homo sapiens
View the network
image/svg+xml
Pathways in which TMBIM6 is involved
No pathways found