Gene description for CD2BP2
Gene name CD2 (cytoplasmic tail) binding protein 2
Gene symbol CD2BP2
Other names/aliases FWP010
LIN1
PPP1R59
Snu40
U5-52K
Species Homo sapiens
 Database cross references - CD2BP2
ExoCarta ExoCarta_10421
Vesiclepedia VP_10421
Entrez Gene 10421
HGNC 1656
MIM 604470
UniProt O95400  
 CD2BP2 identified in sEVs derived from the following tissue/cell type
Thymus 23844026    
 Gene ontology annotations for CD2BP2
Molecular Function
    protein binding GO:0005515 IPI
    ribonucleoprotein complex binding GO:0043021 IDA
Biological Process
    spliceosomal tri-snRNP complex assembly GO:0000244 NAS
Subcellular Localization
    fibrillar center GO:0001650 IDA
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 IDA
    U5 snRNP GO:0005682 IBA
    U5 snRNP GO:0005682 IDA
    cytoplasm GO:0005737 TAS
    cytosol GO:0005829 IDA
    nuclear speck GO:0016607 IDA
    nuclear speck GO:0016607 IDA
    U4/U6 x U5 tri-snRNP complex GO:0046540 IDA
 Experiment description of studies that identified CD2BP2 in sEVs
1
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for CD2BP2
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 UBE2H 7328
Affinity Capture-MS Homo sapiens
2 KPNA6 23633
Affinity Capture-MS Homo sapiens
3 PPP1CB 5500
Affinity Capture-MS Homo sapiens
4 SNRPG 6637
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 CLIP1 6249
Co-fractionation Homo sapiens
6 SNRPE 6635
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 PAXIP1  
Affinity Capture-MS Homo sapiens
8 Prpf8 192159
Affinity Capture-MS Mus musculus
9 KPNA1 3836
Affinity Capture-MS Homo sapiens
10 PRPF8 10594
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
11 GJA1 2697
Affinity Capture-MS Homo sapiens
12 S100A6 6277
Co-fractionation Homo sapiens
13 ZNHIT2 741
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
14 THRAP3 9967
Affinity Capture-MS Homo sapiens
15 ISY1 57461
Affinity Capture-MS Homo sapiens
16 DHX8 1659
Affinity Capture-MS Homo sapiens
17 C9orf78 51759
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
18 CSNK2A1 1457
Biochemical Activity Homo sapiens
19 PRPF3  
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
20 PHF5A 84844
Affinity Capture-MS Homo sapiens
21 AAR2 25980
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
22 AQR 9716
Affinity Capture-MS Homo sapiens
23 SNRPF 6636
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
24 SNRPD2 6633
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
25 CMBL 134147
Affinity Capture-MS Homo sapiens
26 SF3B2 10992
Affinity Capture-MS Homo sapiens
27 PPP1CC 5501
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
28 KIAA1429 25962
Affinity Capture-MS Homo sapiens
29 DDX23 9416
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
30 SNRNP70 6625
Affinity Capture-MS Homo sapiens
31 KIF22  
Affinity Capture-MS Homo sapiens
32 TBL1XR1 79718
Co-fractionation Homo sapiens
33 USP39 10713
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 Htatsf1  
Two-hybrid Mus musculus
35 CD2 914
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
36 PSMD9 5715
Co-fractionation Homo sapiens
37 CPSF7 79869
Two-hybrid Homo sapiens
38 SRRM2 23524
Affinity Capture-MS Homo sapiens
39 SNRPC 6631
Affinity Capture-MS Homo sapiens
40 OBSL1 23363
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
41 EWSR1 2130
Affinity Capture-MS Homo sapiens
42 SF3A2 8175
Affinity Capture-MS Homo sapiens
43 RAB5B 5869
Co-fractionation Homo sapiens
44 TUBGCP3 10426
Affinity Capture-MS Homo sapiens
45 GINS4  
Co-fractionation Homo sapiens
46 Nono 53610
Two-hybrid Mus musculus
47 SNRPD3 6634
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
48 TUBGCP6 85378
Affinity Capture-MS Homo sapiens
49 TUBGCP4 27229
Affinity Capture-MS Homo sapiens
50 MECP2 4204
Affinity Capture-MS Homo sapiens
51 SH3BGRL 6451
Co-fractionation Homo sapiens
52 RBM42  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
53 CHD3 1107
Co-fractionation Homo sapiens
54 UBQLN4 56893
Co-fractionation Homo sapiens
55 RBM22 55696
Affinity Capture-MS Homo sapiens
56 SLU7  
Affinity Capture-MS Homo sapiens
57 TFIP11  
Affinity Capture-MS Homo sapiens
58 KIF14 9928
Affinity Capture-MS Homo sapiens
59 E2F4  
Affinity Capture-MS Homo sapiens
60 PRPF6 24148
Two-hybrid Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Luminescence Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
61 PPP1CA 5499
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
62 FOXA1  
Affinity Capture-MS Homo sapiens
63 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
64 AKNA  
Reconstituted Complex Homo sapiens
65 SMU1 55234
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
66 RSRC1  
Affinity Capture-MS Homo sapiens
67 NONO 4841
Affinity Capture-MS Homo sapiens
68 PSMD14 10213
Affinity Capture-MS Homo sapiens
69 SRSF6 6431
Affinity Capture-MS Homo sapiens
70 PPIH 10465
Co-fractionation Homo sapiens
71 SNRNP200 23020
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
72 CD2BP2 10421
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
73 CCDC12  
Affinity Capture-MS Homo sapiens
74 DDX20 11218
Affinity Capture-MS Homo sapiens
75 SNRPD1 6632
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
76 DDX5 1655
Affinity Capture-MS Homo sapiens
77 NTRK1 4914
Affinity Capture-MS Homo sapiens
78 HTATSF1 27336
Affinity Capture-MS Homo sapiens
79 RAD18  
Affinity Capture-MS Homo sapiens
80 SNRPB2 6629
Affinity Capture-MS Homo sapiens
81 KIAA1143  
Affinity Capture-MS Homo sapiens
82 SNRPN 6638
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
83 P4HB 5034
Affinity Capture-MS Homo sapiens
84 RPA4  
Proximity Label-MS Homo sapiens
85 NAA35 60560
Affinity Capture-MS Homo sapiens
86 SNRNP27  
Affinity Capture-MS Homo sapiens
87 HECTD1 25831
Affinity Capture-MS Homo sapiens
88 SRSF4 6429
Affinity Capture-MS Homo sapiens
89 NKTR  
Affinity Capture-MS Homo sapiens
90 TXNL4A 10907
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
91 PRPF31 26121
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
92 PLRG1 5356
Affinity Capture-MS Homo sapiens
93 SF3A3 10946
Affinity Capture-MS Homo sapiens
94 OGT 8473
Reconstituted Complex Homo sapiens
95 EIF4A2 1974
Affinity Capture-MS Homo sapiens
96 BCLAF1 9774
Affinity Capture-MS Homo sapiens
97 SRSF11 9295
Affinity Capture-MS Homo sapiens
98 ALDH7A1 501
Affinity Capture-MS Homo sapiens
99 SFPQ 6421
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
100 RBM39 9584
Affinity Capture-MS Homo sapiens
101 PRPF4B 8899
Affinity Capture-MS Homo sapiens
102 TUBGCP5 114791
Affinity Capture-MS Homo sapiens
103 AHCYL1 10768
Co-fractionation Homo sapiens
104 ECD  
Affinity Capture-MS Homo sapiens
105 KHK 3795
Affinity Capture-MS Homo sapiens
106 DHX15 1665
Affinity Capture-MS Homo sapiens
107 MGA  
Co-fractionation Homo sapiens
108 SNRPB 6628
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
109 NAT10 55226
Two-hybrid Homo sapiens
110 SRSF1 6426
Affinity Capture-MS Homo sapiens
111 ACAD11 84129
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
112 POLK  
Affinity Capture-MS Homo sapiens
113 CUL3 8452
Affinity Capture-MS Homo sapiens
114 PSMF1 9491
Two-hybrid Homo sapiens
115 HSD17B10 3028
Affinity Capture-MS Homo sapiens
116 EP400  
Co-fractionation Homo sapiens
117 TSSC4  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
118 PRPSAP1 5635
Affinity Capture-MS Homo sapiens
119 HNRNPUL1 11100
Affinity Capture-MS Homo sapiens
120 SART1 9092
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
121 NXF1 10482
Affinity Capture-RNA Homo sapiens
122 AP2M1 1173
Two-hybrid Homo sapiens
123 SF3A1 10291
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
124 EFTUD2 9343
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
125 RPA3 6119
Proximity Label-MS Homo sapiens
126 BPI 671
Affinity Capture-MS Homo sapiens
127 MFAP1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
128 PRPF19 27339
Affinity Capture-MS Homo sapiens
129 PSPC1 55269
Affinity Capture-MS Homo sapiens
130 BANF1 8815
Affinity Capture-MS Homo sapiens
131 TUBGCP2 10844
Affinity Capture-MS Homo sapiens
132 EMC2 9694
Affinity Capture-MS Homo sapiens
133 RAD54B  
Affinity Capture-MS Homo sapiens
134 USP19 10869
Affinity Capture-MS Homo sapiens
Affinity Capture-Luminescence Homo sapiens
135 TOE1 114034
Affinity Capture-MS Homo sapiens
136 SART3 9733
Co-fractionation Homo sapiens
137 GPATCH8  
Affinity Capture-MS Homo sapiens
138 SGTA 6449
Co-fractionation Homo sapiens
139 SF3B3 23450
Affinity Capture-MS Homo sapiens
140 ARHGEF40 55701
Affinity Capture-MS Homo sapiens
141 GEMIN4 50628
Affinity Capture-MS Homo sapiens
142 Sart1  
Affinity Capture-MS Mus musculus
143 U2SURP 23350
Affinity Capture-MS Homo sapiens
144 PLP2 5355
Co-fractionation Homo sapiens
145 DDX46 9879
Affinity Capture-MS Homo sapiens
146 PAXBP1  
Affinity Capture-MS Homo sapiens
147 TRAF7  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
148 NUDT21 11051
Affinity Capture-MS Homo sapiens
149 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
150 KLHL36  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
151 EAPP  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
152 SF3B1 23451
Affinity Capture-MS Homo sapiens
153 SRRM1 10250
Affinity Capture-MS Homo sapiens
154 CREBRF  
Affinity Capture-MS Homo sapiens
155 TUBG1 7283
Affinity Capture-MS Homo sapiens
156 ERH 2079
Affinity Capture-MS Homo sapiens
157 GINS3  
Co-fractionation Homo sapiens
158 WBP11  
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
159 SNRPA1 6627
Affinity Capture-MS Homo sapiens
160 POLR3C 10623
Co-fractionation Homo sapiens
161 SF3B4 10262
Two-hybrid Homo sapiens
162 SNRPA 6626
Affinity Capture-MS Homo sapiens
163 POMP  
Co-fractionation Homo sapiens
164 PNISR  
Affinity Capture-MS Homo sapiens
165 PTBP3 9991
Two-hybrid Homo sapiens
166 GCFC2  
Affinity Capture-MS Homo sapiens
167 PUF60 22827
Affinity Capture-MS Homo sapiens
168 S100A9 6280
Co-fractionation Homo sapiens
169 DDX58 23586
Affinity Capture-RNA Homo sapiens
170 PRPF38B 55119
Affinity Capture-MS Homo sapiens
171 DCD 117159
Affinity Capture-MS Homo sapiens
172 CHRM3 1131
Two-hybrid Homo sapiens
173 SNRNP40 9410
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
174 NAA30 122830
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
175 MOV10 4343
Affinity Capture-RNA Homo sapiens
176 DHX38 9785
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
177 NEDD1 121441
Affinity Capture-MS Homo sapiens
178 TCAF1 9747
Affinity Capture-MS Homo sapiens
179 FAM50A 9130
Affinity Capture-MS Homo sapiens
180 DDX42 11325
Affinity Capture-MS Homo sapiens
181 XRCC6 2547
Proximity Label-MS Homo sapiens
182 PRPF4 9128
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
183 SNW1 22938
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
184 C9orf72  
Affinity Capture-MS Homo sapiens
185 CWC22 57703
Affinity Capture-MS Homo sapiens
186 RC3H1 149041
Affinity Capture-MS Homo sapiens
187 SSRP1 6749
Affinity Capture-MS Homo sapiens
188 SP7  
Proximity Label-MS Homo sapiens
189 AK1 203
Affinity Capture-MS Homo sapiens
190 UBE2V2 7336
Co-fractionation Homo sapiens
191 CDC5L 988
Affinity Capture-MS Homo sapiens
192 COTL1 23406
Co-fractionation Homo sapiens
193 PNN 5411
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which CD2BP2 is involved
No pathways found





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