Gene description for TRIM58
Gene name
tripartite motif containing 58
Gene symbol
TRIM58
Other names/aliases
BIA2
Species
Homo sapiens
Database cross references - TRIM58
ExoCarta
ExoCarta_25893
Vesiclepedia
VP_25893
Entrez Gene
25893
HGNC
24150
UniProt
Q8NG06
TRIM58 identified in sEVs derived from the following tissue/cell type
Platelets
25332113
Platelets
25332113
Platelets
25332113
Gene ontology annotations for TRIM58
Experiment description of studies that identified TRIM58 in sEVs
1
Experiment ID
231
MISEV standards
✘
Biophysical techniques
✔
Alix|CD63|CD9
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
"Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein Lipids
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
232
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
"Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
3
Experiment ID
233
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
"Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 3
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for TRIM58
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
TLR2
7097
Two-hybrid
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
2
FBXW7
Synthetic Lethality
Homo sapiens
3
DYNC1H1
1778
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
4
ACTB
60
Affinity Capture-MS
Homo sapiens
5
HMGA1
3159
Affinity Capture-MS
Homo sapiens
6
HNRNPU
3192
Affinity Capture-MS
Homo sapiens
7
UBE2D3
7323
Reconstituted Complex
Homo sapiens
8
TUBA1A
7846
Affinity Capture-MS
Homo sapiens
9
DYNC1I1
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
Biochemical Activity
Homo sapiens
10
MPRIP
23164
Affinity Capture-MS
Homo sapiens
11
DDX3X
1654
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
TRIM58
25893
Biochemical Activity
Homo sapiens
Biochemical Activity
Homo sapiens
13
KRT5
3852
Affinity Capture-MS
Homo sapiens
14
DYNC2LI1
51626
Affinity Capture-MS
Homo sapiens
15
TMOD3
29766
Affinity Capture-MS
Homo sapiens
16
SRSF3
6428
Affinity Capture-MS
Homo sapiens
17
DYNC1LI2
1783
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which TRIM58 is involved
No pathways found