Gene description for Ikbkb
Gene name inhibitor of kappaB kinase beta
Gene symbol Ikbkb
Other names/aliases AI132552
IKK-2
IKK-beta
IKK2
IKK[b]
IKKbeta
Species Mus musculus
 Database cross references - Ikbkb
ExoCarta ExoCarta_16150
Vesiclepedia VP_16150
Entrez Gene 16150
UniProt O88351  
 Ikbkb identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Ikbkb
Molecular Function
    protein kinase activity GO:0004672 IDA
    protein kinase activity GO:0004672 IMP
    protein kinase activity GO:0004672 ISO
    protein kinase activity GO:0004672 ISS
    protein serine/threonine kinase activity GO:0004674 IBA
    protein serine/threonine kinase activity GO:0004674 IDA
    protein serine/threonine kinase activity GO:0004674 ISO
    3-phosphoinositide-dependent protein kinase activity GO:0004676 IEA
    DNA-dependent protein kinase activity GO:0004677 IEA
    AMP-activated protein kinase activity GO:0004679 IEA
    eukaryotic translation initiation factor 2alpha kinase activity GO:0004694 IEA
    ribosomal protein S6 kinase activity GO:0004711 IEA
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
    ATP binding GO:0005524 ISO
    IkappaB kinase activity GO:0008384 IBA
    IkappaB kinase activity GO:0008384 IDA
    IkappaB kinase activity GO:0008384 IMP
    IkappaB kinase activity GO:0008384 ISO
    IkappaB kinase activity GO:0008384 ISO
    protein kinase binding GO:0019901 ISO
    protein phosphatase binding GO:0019903 IPI
    histone H3S10 kinase activity GO:0035175 IEA
    histone H3T11 kinase activity GO:0035402 IEA
    histone H3T6 kinase activity GO:0035403 IEA
    histone H2AXS139 kinase activity GO:0035979 IEA
    identical protein binding GO:0042802 ISO
    protein homodimerization activity GO:0042803 ISO
    protein homodimerization activity GO:0042803 ISS
    histone H3S28 kinase activity GO:0044022 IEA
    histone H4S1 kinase activity GO:0044023 IEA
    histone H2AS1 kinase activity GO:0044024 IEA
    histone H2BS14 kinase activity GO:0044025 IEA
    protein-containing complex binding GO:0044877 ISO
    protein heterodimerization activity GO:0046982 ISO
    protein heterodimerization activity GO:0046982 ISS
    histone H3T3 kinase activity GO:0072354 IEA
    histone H2AS121 kinase activity GO:0072371 IEA
    Rho-dependent protein serine/threonine kinase activity GO:0072518 IEA
    scaffold protein binding GO:0097110 ISO
    protein serine kinase activity GO:0106310 IEA
    histone H2BS36 kinase activity GO:0140823 IEA
    histone H3S57 kinase activity GO:0140855 IEA
    histone H3T45 kinase activity GO:0140857 IEA
    histone H2AT120 kinase activity GO:1990244 IEA
    transferrin receptor binding GO:1990459 ISO
Biological Process
    B cell homeostasis GO:0001782 IMP
    chromatin remodeling GO:0006338 IEA
    protein phosphorylation GO:0006468 ISO
    integrin-mediated signaling pathway GO:0007229 IDA
    canonical NF-kappaB signal transduction GO:0007249 IDA
    canonical NF-kappaB signal transduction GO:0007249 IMP
    canonical NF-kappaB signal transduction GO:0007249 ISO
    I-kappaB phosphorylation GO:0007252 TAS
    positive regulation of cell population proliferation GO:0008284 ISO
    positive regulation of sodium ion transport GO:0010765 IGI
    positive regulation of neuron projection development GO:0010976 ISO
    peptidyl-serine phosphorylation GO:0018105 IDA
    peptidyl-serine phosphorylation GO:0018105 ISO
    cortical actin cytoskeleton organization GO:0030866 ISO
    neuron projection development GO:0031175 ISO
    tumor necrosis factor-mediated signaling pathway GO:0033209 IBA
    tumor necrosis factor-mediated signaling pathway GO:0033209 IMP
    tumor necrosis factor-mediated signaling pathway GO:0033209 ISO
    tumor necrosis factor-mediated signaling pathway GO:0033209 TAS
    regulation of phosphorylation GO:0042325 ISO
    positive regulation of canonical NF-kappaB signal transduction GO:0043123 IBA
    positive regulation of canonical NF-kappaB signal transduction GO:0043123 ISO
    positive regulation of transcription by RNA polymerase II GO:0045944 IBA
    positive regulation of transcription by RNA polymerase II GO:0045944 ISO
    positive regulation of transcription by RNA polymerase II GO:0045944 ISS
    positive regulation of NF-kappaB transcription factor activity GO:0051092 ISO
    protein maturation GO:0051604 ISO
    response to cholecystokinin GO:0061847 ISO
    interleukin-1-mediated signaling pathway GO:0070498 ISO
    cellular response to tumor necrosis factor GO:0071356 ISO
    cellular response to tumor necrosis factor GO:0071356 ISS
    protein localization to plasma membrane GO:0072659 ISO
    regulation of establishment of endothelial barrier GO:1903140 ISO
    negative regulation of bicellular tight junction assembly GO:1903347 ISO
    positive regulation of cation channel activity GO:2001259 IGI
Subcellular Localization
    nucleus GO:0005634 IEA
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 ISO
    cytoplasm GO:0005737 TAS
    cytosol GO:0005829 ISO
    IkappaB kinase complex GO:0008385 IBA
    IkappaB kinase complex GO:0008385 IDA
    IkappaB kinase complex GO:0008385 IPI
    IkappaB kinase complex GO:0008385 ISO
    cytoplasmic side of plasma membrane GO:0009898 IDA
    CD40 receptor complex GO:0035631 IDA
    membrane raft GO:0045121 IEA
 Experiment description of studies that identified Ikbkb in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Ikbkb
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Ubc  
Reconstituted Complex Mus musculus
2 Btrc  
Affinity Capture-Western Mus musculus
3 Tnfrsf1a 21937
Affinity Capture-Western Mus musculus
Co-fractionation Mus musculus
4 Rbck1  
Affinity Capture-Western Mus musculus
5 Snap23 20619
Affinity Capture-Western Mus musculus
6 Cited2  
Phenotypic Suppression Mus musculus
7 Tnfaip3  
Co-fractionation Mus musculus
8 Ikbkg  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Biochemical Activity Mus musculus
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
9 IKBKG 8517
Affinity Capture-Western Homo sapiens
10 Sash1  
Affinity Capture-Western Mus musculus
11 Nfkbib  
Biochemical Activity Mus musculus
12 Cd40 21939
Affinity Capture-Western Mus musculus
13 ACVR1 90
Affinity Capture-Luminescence Homo sapiens
14 TGFBR1 7046
Affinity Capture-Luminescence Homo sapiens
15 Tmem173  
Proximity Label-MS Mus musculus
16 Rela  
Co-fractionation Mus musculus
17 Rnf31  
Affinity Capture-Western Mus musculus
Co-fractionation Mus musculus
18 Klhl21  
Affinity Capture-Western Mus musculus
Reconstituted Complex Mus musculus
19 Optn  
Biochemical Activity Mus musculus
20 Rhoa 11848
Affinity Capture-Western Mus musculus
21 Hivep2  
Co-fractionation Mus musculus
22 Prdm1 12142
Phenotypic Enhancement Mus musculus
23 Nkx3-2  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
Biochemical Activity Mus musculus
24 Reg1  
Affinity Capture-Western Mus musculus
25 Chuk  
Affinity Capture-Western Mus musculus
Affinity Capture-Western Mus musculus
26 Nfkbia  
Biochemical Activity Mus musculus
Biochemical Activity Mus musculus
Biochemical Activity Mus musculus
27 Smn1 20595
Affinity Capture-Western Mus musculus
28 Atg12  
Negative Genetic Mus musculus
29 Fbxw11  
Co-fractionation Mus musculus
30 Fancd2  
Affinity Capture-MS Mus musculus
View the network image/svg+xml
 Pathways in which Ikbkb is involved
PathwayEvidenceSource
Activation of NF-kappaB in B cells IEA Reactome
Adaptive Immune System IEA Reactome
Antiviral mechanism by IFN-stimulated genes IEA Reactome
C-type lectin receptors (CLRs) IEA Reactome
Cellular responses to mechanical stimuli IEA Reactome
Cellular responses to stimuli IEA Reactome
CLEC7A (Dectin-1) signaling IEA Reactome
Cytokine Signaling in Immune system IEA Reactome
Cytosolic sensors of pathogen-associated DNA IEA Reactome
DDX58/IFIH1-mediated induction of interferon-alpha/beta IEA Reactome
Death Receptor Signaling IEA Reactome
Downstream signaling events of B Cell Receptor (BCR) IEA Reactome
Downstream TCR signaling IEA Reactome
Fc epsilon receptor (FCERI) signaling IEA Reactome
FCERI mediated NF-kB activation IEA Reactome
IKK complex recruitment mediated by RIP1 IEA Reactome
Immune System IEA Reactome
Innate Immune System IEA Reactome
Interferon Signaling IEA Reactome
Interleukin-1 family signaling IEA Reactome
Interleukin-1 signaling IEA Reactome
Interleukin-17 signaling IEA Reactome
IRAK1 recruits IKK complex IEA Reactome
IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation IEA Reactome
MAP kinase activation IEA Reactome
MAP3K8 (TPL2)-dependent MAPK1/3 activation IEA Reactome
MyD88 cascade initiated on plasma membrane IEA Reactome
MyD88 dependent cascade initiated on endosome IEA Reactome
MyD88-independent TLR4 cascade IEA Reactome
MyD88:MAL(TIRAP) cascade initiated on plasma membrane IEA Reactome
NF-kB is activated and signals survival IEA Reactome
p75 NTR receptor-mediated signalling IEA Reactome
p75NTR recruits signalling complexes IEA Reactome
p75NTR signals via NF-kB IEA Reactome
PKR-mediated signaling IEA Reactome
Regulation of NF-kappa B signaling IEA Reactome
Regulation of TNFR1 signaling IEA Reactome
Response of endothelial cells to shear stress IEA Reactome
RIP-mediated NFkB activation via ZBP1 IEA Reactome
Signal Transduction IEA Reactome
Signaling by Interleukins IEA Reactome
Signaling by the B Cell Receptor (BCR) IEA Reactome
SLC15A4:TASL-dependent IRF5 activation IEA Reactome
TAK1-dependent IKK and NF-kappa-B activation IEA Reactome
TCR signaling IEA Reactome
TNF signaling IEA Reactome
TNFR1-induced NF-kappa-B signaling pathway IEA Reactome
Toll Like Receptor 10 (TLR10) Cascade IEA Reactome
Toll Like Receptor 2 (TLR2) Cascade IEA Reactome
Toll Like Receptor 3 (TLR3) Cascade IEA Reactome
Toll Like Receptor 4 (TLR4) Cascade IEA Reactome
Toll Like Receptor 5 (TLR5) Cascade IEA Reactome
Toll Like Receptor 7/8 (TLR7/8) Cascade IEA Reactome
Toll Like Receptor 9 (TLR9) Cascade IEA Reactome
Toll Like Receptor TLR1:TLR2 Cascade IEA Reactome
Toll Like Receptor TLR6:TLR2 Cascade IEA Reactome
Toll-like Receptor Cascades IEA Reactome
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation IEA Reactome
TRAF6 mediated NF-kB activation IEA Reactome
TRIF (TICAM1)-mediated TLR4 signaling IEA Reactome
Turbulent (oscillatory, disturbed) flow shear stress activates signaling by PIEZO1 and integrins in endothelial cells IEA Reactome
ZBP1(DAI) mediated induction of type I IFNs IEA Reactome





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