Gene description for NEFL
Gene name neurofilament, light polypeptide
Gene symbol NEFL
Other names/aliases CMT1F
CMT2E
NF-L
NF68
NFL
PPP1R110
Species Homo sapiens
 Database cross references - NEFL
ExoCarta ExoCarta_4747
Vesiclepedia VP_4747
Entrez Gene 4747
HGNC 7739
MIM 162280
UniProt P07196  
 NEFL identified in sEVs derived from the following tissue/cell type
Liver cancer cells 25265333    
 Gene ontology annotations for NEFL
Molecular Function
    structural constituent of cytoskeleton GO:0005200 IDA
    protein binding GO:0005515 IPI
    protein domain specific binding GO:0019904 IEA
    protein-macromolecule adaptor activity GO:0030674 ISS
    identical protein binding GO:0042802 IPI
    phospholipase binding GO:0043274 IEA
    protein-containing complex binding GO:0044877 IEA
    structural constituent of postsynaptic intermediate filament cytoskeleton GO:0099184 IBA
Biological Process
    microtubule cytoskeleton organization GO:0000226 IEA
    axonogenesis GO:0007409 IEA
    anterograde axonal transport GO:0008089 IMP
    retrograde axonal transport GO:0008090 IMP
    response to toxic substance GO:0009636 IEA
    peripheral nervous system axon regeneration GO:0014012 IEA
    axonal transport of mitochondrion GO:0019896 IMP
    spinal cord development GO:0021510 IEA
    hippocampus development GO:0021766 IEA
    cerebral cortex development GO:0021987 IEA
    regulation of axon diameter GO:0031133 IEA
    neurofilament bundle assembly GO:0033693 IBA
    neurofilament bundle assembly GO:0033693 IDA
    neurofilament bundle assembly GO:0033693 IMP
    locomotion GO:0040011 IEA
    response to peptide hormone GO:0043434 IEA
    intermediate filament polymerization or depolymerization GO:0045105 IEA
    intermediate filament organization GO:0045109 IMP
    positive regulation of axonogenesis GO:0050772 IEA
    neuromuscular process controlling balance GO:0050885 IEA
    protein polymerization GO:0051258 IEA
    response to corticosterone GO:0051412 IEA
    neurofilament cytoskeleton organization GO:0060052 IEA
    regulation of synapse maturation GO:0090128 IEA
    motor neuron apoptotic process GO:0097049 IEA
    postsynaptic modulation of chemical synaptic transmission GO:0099170 IEA
    postsynaptic intermediate filament cytoskeleton organization GO:0099185 IEA
    response to sodium arsenite GO:1903935 IEA
    response to acrylamide GO:1903937 IEA
    negative regulation of motor neuron apoptotic process GO:2000672 IEA
Subcellular Localization
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 ISS
    cytosol GO:0005829 TAS
    intermediate filament GO:0005882 IBA
    neurofilament GO:0005883 IDA
    axon GO:0030424 IBA
    axon GO:0030424 IDA
    growth cone GO:0030426 IEA
    neuromuscular junction GO:0031594 IEA
    Schaffer collateral - CA1 synapse GO:0098685 IEA
    cholinergic synapse GO:0098981 IEA
    postsynaptic intermediate filament cytoskeleton GO:0099160 IBA
    presynaptic intermediate filament cytoskeleton GO:0099182 IEA
    axon cytoplasm GO:1904115 IEA
 Experiment description of studies that identified NEFL in sEVs
1
Experiment ID 267
MISEV standards
✘ Biophysical techniques
✔
TSG101|Alix
Enriched markers
✔
CANX|HSP90B1
Negative markers
✘ Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25265333    
Organism Homo sapiens
Experiment description Quantitative Proteomic Analysis of Exosome Protein Content Changes Induced by Hepatitis B Virus in Huh-7 Cells Using SILAC Labeling and LC-MS/MS
Authors "Zhao X, Wu Y, Duan J, Ma Y, Shen Z, Wei L, Cui X, Zhang J, Xie Y, Liu J"
Journal name J Proteome Res
Publication year 2014
Sample Liver cancer cells
Sample name Huh-7 - Transfected with HBx plasmids
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
 Protein-protein interactions for NEFL
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ARHGEF25 115557
Affinity Capture-MS Homo sapiens
2 ENKD1  
Two-hybrid Homo sapiens
3 ECT2L  
Affinity Capture-MS Homo sapiens
4 DPP9 91039
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 ARHGEF19  
Affinity Capture-MS Homo sapiens
6 ANLN 54443
Affinity Capture-MS Homo sapiens
7 COX15 1355
Proximity Label-MS Homo sapiens
8 KIFC3 3801
Two-hybrid Homo sapiens
9 MCF2  
Affinity Capture-MS Homo sapiens
10 GMIP  
Affinity Capture-MS Homo sapiens
11 TEX11  
Two-hybrid Homo sapiens
12 FGD4 121512
Affinity Capture-MS Homo sapiens
13 PRMT6  
Two-hybrid Homo sapiens
14 ARHGAP42  
Affinity Capture-MS Homo sapiens
15 BASP1 10409
Cross-Linking-MS (XL-MS) Homo sapiens
16 TRIM55  
Two-hybrid Homo sapiens
17 OCIAD1 54940
Proximity Label-MS Homo sapiens
18 APP 351
Co-localization Homo sapiens
19 PPP1CC 5501
Affinity Capture-MS Homo sapiens
20 IGF2BP3 10643
Affinity Capture-MS Homo sapiens
21 CRYZ 1429
Proximity Label-MS Homo sapiens
22 NME7 29922
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
23 PPP1R18 170954
Two-hybrid Homo sapiens
24 PRC1 9055
Affinity Capture-MS Homo sapiens
25 YWHAG 7532
Affinity Capture-MS Homo sapiens
26 MARCH5  
Proximity Label-MS Homo sapiens
27 SURF1  
Proximity Label-MS Homo sapiens
28 Plekhg5  
Affinity Capture-MS Mus musculus
29 SLC25A46 91137
Proximity Label-MS Homo sapiens
30 C18orf8 29919
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
31 MECP2 4204
Affinity Capture-MS Homo sapiens
32 MRPL4 51073
Affinity Capture-MS Homo sapiens
33 CHD3 1107
Two-hybrid Homo sapiens
34 OBSL1 23363
Affinity Capture-MS Homo sapiens
35 NEIL3  
Protein-RNA Homo sapiens
36 KIF14 9928
Affinity Capture-MS Homo sapiens
37 PRNP 5621
Affinity Capture-MS Homo sapiens
38 MAP2 4133
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
39 KRT8 3856
Cross-Linking-MS (XL-MS) Homo sapiens
40 MTCH2 23788
Proximity Label-MS Homo sapiens
41 SAMM50 25813
Proximity Label-MS Homo sapiens
42 ECT2 1894
Affinity Capture-MS Homo sapiens
43 PARK2  
Affinity Capture-MS Homo sapiens
44 KRT31 3881
Affinity Capture-MS Homo sapiens
45 PIAS4  
Two-hybrid Homo sapiens
46 RABEP1 9135
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
47 PSMD14 10213
Affinity Capture-MS Homo sapiens
48 PPP1R16B  
Two-hybrid Homo sapiens
49 CHMP4B 128866
Affinity Capture-MS Homo sapiens
50 MYO15B 80022
Two-hybrid Homo sapiens
51 SYNC  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
52 CCDC109B 55013
Proximity Label-MS Homo sapiens
53 KRT14 3861
Affinity Capture-MS Homo sapiens
54 PKN1 5585
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
55 GFAP 2670
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
56 TRIM63  
Two-hybrid Homo sapiens
57 PSG9  
Affinity Capture-MS Homo sapiens
58 CDC14A  
Proximity Label-MS Homo sapiens
59 BRD7  
Two-hybrid Homo sapiens
60 GAN 8139
Affinity Capture-MS Homo sapiens
61 S100P 6286
Affinity Capture-MS Homo sapiens
62 MAP7 9053
Affinity Capture-MS Homo sapiens
63 CCNC  
Two-hybrid Homo sapiens
64 KIF20A 10112
Affinity Capture-MS Homo sapiens
65 C16orf70  
Affinity Capture-MS Homo sapiens
66 SIRT7  
Affinity Capture-MS Homo sapiens
67 HOXB5  
Affinity Capture-MS Homo sapiens
68 CRYAB 1410
Affinity Capture-MS Homo sapiens
69 TXLNB  
Two-hybrid Homo sapiens
70 DES 1674
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
71 USP2  
Two-hybrid Homo sapiens
72 CCDC13 152206
Two-hybrid Homo sapiens
73 RPL7 6129
Cross-Linking-MS (XL-MS) Homo sapiens
74 KRT27 342574
Affinity Capture-MS Homo sapiens
75 SETBP1  
Cross-Linking-MS (XL-MS) Homo sapiens
76 KRT15 3866
Two-hybrid Homo sapiens
77 NEFM 4741
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
78 BICD2 23299
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
79 SEC16A 9919
Affinity Capture-MS Homo sapiens
80 BICD1 636
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
81 HAX1  
Proximity Label-MS Homo sapiens
82 SMYD1  
Two-hybrid Homo sapiens
83 CCDC8  
Affinity Capture-MS Homo sapiens
84 NES 10763
Affinity Capture-MS Homo sapiens
85 KRT18 3875
Cross-Linking-MS (XL-MS) Homo sapiens
86 DEPDC1B 55789
Affinity Capture-MS Homo sapiens
87 SPTAN1 6709
Reconstituted Complex Homo sapiens
88 CHCHD1  
Proximity Label-MS Homo sapiens
89 NEK6 10783
Two-hybrid Homo sapiens
90 RSPRY1 89970
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
91 NGEF  
Affinity Capture-MS Homo sapiens
92 TSC1 7248
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
93 FAM83H 286077
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
94 NEFH 4744
Co-purification Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
95 IDE 3416
Affinity Capture-MS Homo sapiens
96 SKAP1 8631
Affinity Capture-MS Homo sapiens
97 TERF1 7013
Two-hybrid Homo sapiens
98 KDM1A 23028
Two-hybrid Homo sapiens
99 SLC25A51  
Proximity Label-MS Homo sapiens
100 CIT 11113
Cross-Linking-MS (XL-MS) Homo sapiens
101 PDE4DIP 9659
Two-hybrid Homo sapiens
102 KRT23  
Affinity Capture-MS Homo sapiens
103 ARHGAP23 57636
Affinity Capture-MS Homo sapiens
104 AR 367
Proximity Label-MS Homo sapiens
105 CCDC96  
Affinity Capture-MS Homo sapiens
106 VIM 7431
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
107 PRMT1 3276
Affinity Capture-MS Homo sapiens
108 NDN 4692
Two-hybrid Homo sapiens
109 KRT7 3855
Affinity Capture-MS Homo sapiens
110 AIM1 202
Affinity Capture-MS Homo sapiens
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here