Gene description for Snrpd2
Gene name small nuclear ribonucleoprotein D2 polypeptide
Gene symbol Snrpd2
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Snrpd2
ExoCarta ExoCarta_680309
Vesiclepedia VP_680309
Entrez Gene 680309
 Snrpd2 identified in sEVs derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Snrpd2
Molecular Function
    RNA binding GO:0003723 IEA
    U1 snRNP binding GO:1990446 IDA
Biological Process
    spliceosomal snRNP assembly GO:0000387 IBA
    spliceosomal snRNP assembly GO:0000387 ISO
    mRNA splicing, via spliceosome GO:0000398 ISO
    biological_process GO:0008150 ND
Subcellular Localization
    nucleus GO:0005634 ISO
    spliceosomal complex GO:0005681 ISO
    U5 snRNP GO:0005682 IBA
    U2-type spliceosomal complex GO:0005684 ISO
    U1 snRNP GO:0005685 IBA
    U1 snRNP GO:0005685 IDA
    U1 snRNP GO:0005685 ISO
    U2 snRNP GO:0005686 IBA
    U4 snRNP GO:0005687 ISO
    U12-type spliceosomal complex GO:0005689 ISO
    cytosol GO:0005829 ISO
    methylosome GO:0034709 ISO
    pICln-Sm protein complex GO:0034715 IBA
    pICln-Sm protein complex GO:0034715 ISO
    SMN-Sm protein complex GO:0034719 ISO
    U4/U6 x U5 tri-snRNP complex GO:0046540 IBA
    U4/U6 x U5 tri-snRNP complex GO:0046540 ISO
    U2-type precatalytic spliceosome GO:0071005 ISO
    U2-type catalytic step 2 spliceosome GO:0071007 ISO
    precatalytic spliceosome GO:0071011 IBA
    catalytic step 2 spliceosome GO:0071013 IBA
    catalytic step 2 spliceosome GO:0071013 ISO
 Experiment description of studies that identified Snrpd2 in sEVs
1
Experiment ID 96
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 97
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Snrpd2
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.
 Pathways in which Snrpd2 is involved
No pathways found





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