Gene description for Phf8
Gene name PHD finger protein 8
Gene symbol Phf8
Other names/aliases 9830141C09Rik
mKIAA1111
Species Mus musculus
 Database cross references - Phf8
ExoCarta ExoCarta_320595
Vesiclepedia VP_320595
Entrez Gene 320595
UniProt Q80TJ7  
 Phf8 identified in sEVs derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Phf8
Molecular Function
    chromatin binding GO:0003682 ISO
    chromatin binding GO:0003682 ISS
    transcription coregulator activity GO:0003712 IBA
    iron ion binding GO:0005506 ISO
    iron ion binding GO:0005506 ISS
    zinc ion binding GO:0008270 ISO
    zinc ion binding GO:0008270 ISS
    2-oxoglutarate-dependent dioxygenase activity GO:0016706 ISO
    2-oxoglutarate-dependent dioxygenase activity GO:0016706 ISS
    histone demethylase activity GO:0032452 IBA
    histone demethylase activity GO:0032452 ISO
    histone demethylase activity GO:0032452 ISS
    histone H3K9 demethylase activity GO:0032454 ISO
    histone H3K9 demethylase activity GO:0032454 ISS
    methylated histone binding GO:0035064 ISO
    methylated histone binding GO:0035064 ISS
    histone H4K20 demethylase activity GO:0035575 ISO
    histone H4K20 demethylase activity GO:0035575 ISS
    histone H3K36 demethylase activity GO:0051864 ISO
    histone H3K36 demethylase activity GO:0051864 ISS
    histone H3K27me2/H3K27me3 demethylase activity GO:0071558 ISO
    histone H3K27me2/H3K27me3 demethylase activity GO:0071558 ISS
    histone H3K36me/H3K36me2 demethylase activity GO:0140680 IEA
    histone H3K9me/H3K9me2 demethylase activity GO:0140683 IEA
    FAD-dependent histone H3K9me/H3K9me2 demethylase activity GO:0140685 IEA
Biological Process
    G1/S transition of mitotic cell cycle GO:0000082 ISO
    G1/S transition of mitotic cell cycle GO:0000082 ISS
    chromatin remodeling GO:0006338 IBA
    chromatin remodeling GO:0006338 IEA
    regulation of transcription by RNA polymerase II GO:0006357 IBA
    brain development GO:0007420 ISS
    positive regulation of DNA-templated transcription GO:0045893 ISO
    positive regulation of DNA-templated transcription GO:0045893 ISS
    positive regulation of transcription by RNA polymerase I GO:0045943 ISO
    positive regulation of transcription by RNA polymerase I GO:0045943 ISS
    positive regulation of transcription by RNA polymerase II GO:0045944 IEA
    positive regulation of transcription by RNA polymerase II GO:0045944 ISO
    negative regulation of rDNA heterochromatin formation GO:0061188 ISO
    negative regulation of rDNA heterochromatin formation GO:0061188 ISS
Subcellular Localization
    nucleus GO:0005634 ISO
    nucleus GO:0005634 ISS
    nucleoplasm GO:0005654 IEA
    nucleoplasm GO:0005654 ISO
    nucleolus GO:0005730 ISO
    nucleolus GO:0005730 ISS
    nuclear membrane GO:0031965 IEA
    nuclear membrane GO:0031965 ISO
 Experiment description of studies that identified Phf8 in sEVs
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors "Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO"
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Phf8
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Ddb1 13194
Affinity Capture-MS Mus musculus
View the network image/svg+xml
 Pathways in which Phf8 is involved
PathwayEvidenceSource
Chromatin modifying enzymes IEA Reactome
Chromatin organization IEA Reactome
HDMs demethylate histones IEA Reactome





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