Gene description for Tcirg1
Gene name T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
Gene symbol Tcirg1
Other names/aliases OC116
TIRC7
Species Rattus norvegicus
 Database cross references - Tcirg1
ExoCarta ExoCarta_293650
Vesiclepedia VP_293650
Entrez Gene 293650
 Tcirg1 identified in sEVs derived from the following tissue/cell type
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Tcirg1
Molecular Function
    proton transmembrane transporter activity GO:0015078 NAS
    proton-transporting ATPase activity, rotational mechanism GO:0046961 IEA
    ATPase binding GO:0051117 IBA
Biological Process
    autophagosome assembly GO:0000045 ISO
    ossification GO:0001503 ISO
    osteoclast proliferation GO:0002158 ISO
    intracellular calcium ion homeostasis GO:0006874 ISO
    autophagy GO:0006914 ISO
    apoptotic process GO:0006915 ISO
    inflammatory response GO:0006954 ISO
    vacuolar acidification GO:0007035 IBA
    protein catabolic process in the vacuole GO:0007039 ISO
    regulation of proton transport GO:0010155 ISO
    response to silver ion GO:0010272 ISO
    gene expression GO:0010467 ISO
    regulation of gene expression GO:0010468 ISO
    immunoglobulin mediated immune response GO:0016064 ISO
    macroautophagy GO:0016236 ISO
    optic nerve development GO:0021554 ISO
    establishment of cell polarity GO:0030010 ISO
    myeloid cell differentiation GO:0030099 ISO
    B cell differentiation GO:0030183 ISO
    T cell differentiation GO:0030217 ISO
    osteoclast differentiation GO:0030316 ISO
    ruffle organization GO:0031529 ISO
    protein localization to organelle GO:0033365 ISO
    memory T cell activation GO:0035709 ISO
    T-helper 1 cell activation GO:0035711 ISO
    odontogenesis GO:0042476 ISO
    T cell homeostasis GO:0043029 ISO
    tooth eruption GO:0044691 ISO
    bone resorption GO:0045453 ISO
    regulation of osteoblast differentiation GO:0045667 ISO
    pH reduction GO:0045851 ISO
    homeostasis of number of cells GO:0048872 ISO
    regulation of insulin secretion GO:0050796 ISO
    intracellular pH reduction GO:0051452 ISO
    establishment of vesicle localization GO:0051650 ISO
    retina development in camera-type eye GO:0060041 ISO
    hematopoietic stem cell homeostasis GO:0061484 ISO
    enamel mineralization GO:0070166 ISO
    cellular response to cytokine stimulus GO:0071345 ISO
    phagosome acidification GO:0090383 ISO
    dentin mineralization GO:0097188 ISO
    proton transmembrane transport GO:1902600 NAS
Subcellular Localization
    vacuolar proton-transporting V-type ATPase, V0 domain GO:0000220 IEA
    nucleus GO:0005634 ISO
    lysosome GO:0005764 ISO
    late endosome GO:0005770 ISO
    plasma membrane GO:0005886 IBA
    plasma membrane GO:0005886 ISO
    apical plasma membrane GO:0016324 ISO
    vacuolar proton-transporting V-type ATPase complex GO:0016471 IBA
    secretory granule membrane GO:0030667 ISO
    phagocytic vesicle membrane GO:0030670 ISO
    proton-transporting V-type ATPase, V0 domain GO:0033179 IEA
    phagocytic vesicle GO:0045335 ISO
 Experiment description of studies that identified Tcirg1 in sEVs
1
Experiment ID 90
MISEV standards
EM
Biophysical techniques
HSC70|HSP90|TSG101|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E"
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
2
Experiment ID 94
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 96
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 97
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
5
Experiment ID 99
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [QSTAR]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Tcirg1
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.
 Pathways in which Tcirg1 is involved
No pathways found





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