Gene description for Znhit6
Gene name zinc finger, HIT-type containing 6
Gene symbol Znhit6
Other names/aliases RGD1308723
Species Rattus norvegicus
 Database cross references - Znhit6
ExoCarta ExoCarta_292160
Vesiclepedia VP_292160
Entrez Gene 292160
 Znhit6 identified in sEVs derived from the following tissue/cell type
Pancreatic cancer cells 20124479    
Pancreatic cancer cells 20124479    
 Gene ontology annotations for Znhit6
Molecular Function
    TFIID-class transcription factor complex binding GO:0001094 ISO
    enzyme binding GO:0019899 ISO
    identical protein binding GO:0042802 ISO
    ATPase binding GO:0051117 ISO
Biological Process
    maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000463 IBA
    box C/D snoRNP assembly GO:0000492 IBA
    box C/D snoRNP assembly GO:0000492 ISO
    snoRNA localization GO:0048254 IBA
    snoRNA localization GO:0048254 ISO
    protein complex oligomerization GO:0051259 ISO
Subcellular Localization
    nucleus GO:0005634 IBA
    pre-snoRNP complex GO:0070761 IBA
    pre-snoRNP complex GO:0070761 ISO
 Experiment description of studies that identified Znhit6 in sEVs
1
Experiment ID 92
MISEV standards
EM
Biophysical techniques
HSP70|GAPDH|CD9|CD151
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 20124479    
Organism Rattus norvegicus
Experiment description Cell surface tetraspanin Tspan8 contributes to molecular pathways of exosome-induced endothelial cell activation.
Authors "Nazarenko I, Rana S, Baumann A, McAlear J, Hellwig A, Trendelenburg M, Lochnit G, Preissner KT, Zoller M."
Journal name CR
Publication year 2010
Sample Pancreatic cancer cells
Sample name AS
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.14-1.17 g/mL
Molecules identified in the study Protein
mRNA
Methods used in the study RT-PCR
Western blotting
RatRef-12 Microarray
FACS
Mass spectrometry [MALDI TOF]
2
Experiment ID 93
MISEV standards
EM
Biophysical techniques
HSP70|GAPDH|CD9|CD151
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 20124479    
Organism Rattus norvegicus
Experiment description Cell surface tetraspanin Tspan8 contributes to molecular pathways of exosome-induced endothelial cell activation.
Authors "Nazarenko I, Rana S, Baumann A, McAlear J, Hellwig A, Trendelenburg M, Lochnit G, Preissner KT, Zoller M."
Journal name CR
Publication year 2010
Sample Pancreatic cancer cells
Sample name AS-Tspan8
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.14-1.17 g/mL
Molecules identified in the study Protein
mRNA
Methods used in the study RT-PCR
Western blotting
 Protein-protein interactions for Znhit6
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Sumo3  
Affinity Capture-MS Rattus norvegicus
View the network image/svg+xml
 Pathways in which Znhit6 is involved
No pathways found





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