Gene description for Slc6a4
Gene name solute carrier family 6 (neurotransmitter transporter), member 4
Gene symbol Slc6a4
Other names/aliases -
Species Rattus norvegicus
 Database cross references - Slc6a4
ExoCarta ExoCarta_25553
Vesiclepedia VP_25553
Entrez Gene 25553
UniProt P31652  
 Slc6a4 identified in sEVs derived from the following tissue/cell type
Reticulocytes 21828046    
 Gene ontology annotations for Slc6a4
Molecular Function
    integrin binding GO:0005178 ISO
    integrin binding GO:0005178 ISS
    monoatomic cation channel activity GO:0005261 IDA
    neurotransmitter transmembrane transporter activity GO:0005326 ISO
    serotonin:sodium:chloride symporter activity GO:0005335 IBA
    serotonin:sodium:chloride symporter activity GO:0005335 IDA
    serotonin:sodium:chloride symporter activity GO:0005335 IMP
    serotonin:sodium:chloride symporter activity GO:0005335 ISO
    serotonin:sodium:chloride symporter activity GO:0005335 TAS
    protein binding GO:0005515 IPI
    monoamine transmembrane transporter activity GO:0008504 ISO
    antiporter activity GO:0015297 ISO
    syntaxin-1 binding GO:0017075 IPI
    cocaine binding GO:0019811 IMP
    sodium ion binding GO:0031402 ISO
    sodium ion binding GO:0031402 ISS
    identical protein binding GO:0042802 IPI
    nitric-oxide synthase binding GO:0050998 ISO
    actin filament binding GO:0051015 IDA
    serotonin binding GO:0051378 IBA
    serotonin binding GO:0051378 ISO
    serotonin binding GO:0051378 ISS
Biological Process
    response to hypoxia GO:0001666 IEP
    neurotransmitter transport GO:0006836 ISO
    serotonin transport GO:0006837 IDA
    serotonin transport GO:0006837 IMP
    serotonin transport GO:0006837 ISO
    serotonin transport GO:0006837 TAS
    amino acid transport GO:0006865 IBA
    response to nutrient GO:0007584 IEP
    memory GO:0007613 IMP
    circadian rhythm GO:0007623 IMP
    locomotory behavior GO:0007626 NAS
    response to xenobiotic stimulus GO:0009410 IEP
    response to toxic substance GO:0009636 ISO
    positive regulation of gene expression GO:0010628 ISO
    positive regulation of serotonin secretion GO:0014064 IMP
    monoamine transport GO:0015844 ISO
    negative regulation of cerebellar granule cell precursor proliferation GO:0021941 IMP
    negative regulation of synaptic transmission, dopaminergic GO:0032227 IMP
    response to estradiol GO:0032355 IEP
    sodium ion transmembrane transport GO:0035725 IBA
    vasoconstriction GO:0042310 IMP
    negative regulation of neuron differentiation GO:0045665 IMP
    positive regulation of cell cycle GO:0045787 ISO
    negative regulation of organ growth GO:0046621 ISO
    behavioral response to cocaine GO:0048148 IMP
    enteric nervous system development GO:0048484 ISO
    brain morphogenesis GO:0048854 ISO
    serotonin uptake GO:0051610 IBA
    serotonin uptake GO:0051610 IDA
    serotonin uptake GO:0051610 ISO
    membrane depolarization GO:0051899 IDA
    male mating behavior GO:0060179 IMP
    platelet aggregation GO:0070527 ISO
    platelet aggregation GO:0070527 ISS
    cellular response to retinoic acid GO:0071300 IEP
    cellular response to cGMP GO:0071321 IDA
    regulation of thalamus size GO:0090067 ISO
    regulation of thalamus size GO:0090067 ISS
    neurotransmitter reuptake GO:0098810 ISO
    conditioned place preference GO:1990708 IMP
Subcellular Localization
    plasma membrane GO:0005886 IBA
    plasma membrane GO:0005886 IDA
    plasma membrane GO:0005886 ISO
    focal adhesion GO:0005925 ISO
    focal adhesion GO:0005925 ISS
    endosome membrane GO:0010008 IEA
    endomembrane system GO:0012505 IDA
    endomembrane system GO:0012505 ISO
    endomembrane system GO:0012505 NAS
    presynaptic membrane GO:0042734 IDA
    neuron projection GO:0043005 IBA
    membrane raft GO:0045121 ISO
    synapse GO:0045202 IBA
    synapse GO:0045202 ISO
    synapse GO:0045202 ISS
    postsynaptic membrane GO:0045211 IDA
    serotonergic synapse GO:0099154 IDA
 Experiment description of studies that identified Slc6a4 in sEVs
1
Experiment ID 97
MISEV standards
EM
Biophysical techniques
TSG101|HSP90|HSC70|MHCI
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors "Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E."
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Slc6a4
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.



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