|
Gene ontology annotations for Cd9 |
|
|
Experiment description of studies that identified Cd9 in sEVs |
| 1 |
| Experiment ID |
655 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd9|Tsg101
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
Protein
|
| Identification method |
Western blotting
|
| PubMed ID |
36640325
|
| Organism |
Mus musculus |
| Experiment description |
Exosomal miR-27b-3p secreted by visceral adipocytes contributes to endothelial inflammation and atherogenesis |
| Authors |
"Tang Y, Yang LJ, Liu H, Song YJ, Yang QQ, Liu Y, Qian SW, Tang QQ." |
| Journal name |
Cell Rep
|
| Publication year |
2023 |
| Sample |
Adipocytes |
| Sample name |
Visceral (gonadal) adipose tissue |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting Small RNA sequencing RT-qPCR |
|
|
| 2 |
| Experiment ID |
656 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd9|Tsg101
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
Protein
|
| Identification method |
Western blotting
|
| PubMed ID |
36640325
|
| Organism |
Mus musculus |
| Experiment description |
Exosomal miR-27b-3p secreted by visceral adipocytes contributes to endothelial inflammation and atherogenesis |
| Authors |
"Tang Y, Yang LJ, Liu H, Song YJ, Yang QQ, Liu Y, Qian SW, Tang QQ." |
| Journal name |
Cell Rep
|
| Publication year |
2023 |
| Sample |
Adipocytes |
| Sample name |
Visceral (gonadal) adipose tissue |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting Small RNA sequencing RT-qPCR |
|
|
| 3 |
| Experiment ID |
59 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
CD9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
17700640
|
| Organism |
Mus musculus |
| Experiment description |
CD24 is a marker of exosomes secreted into urine and amniotic fluid. |
| Authors |
"Keller S, Rupp C, Stoeck A, Runz S, Fogel M, Lugert S, Hager HD, Abdel-Bakky MS, Gutwein P, Altevogt P" |
| Journal name |
KI
|
| Publication year |
2007 |
| Sample |
Amniotic fluid |
| Sample name |
Amniotic fluid |
| Isolation/purification methods |
Differential centrifugation Sucrose density gradient |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 4 |
| Experiment ID |
1054 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Brain |
| Sample name |
WT mice - Fraction c |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 5 |
| Experiment ID |
1055 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Brain |
| Sample name |
WT mice - Fraction d |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 6 |
| Experiment ID |
1060 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Brain |
| Sample name |
KO mice - Fraction c |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 7 |
| Experiment ID |
1061 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd9|Cd63
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Brain |
| Sample name |
KO mice - Fraction d |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 8 |
| Experiment ID |
26 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Alix|GAPDH|HSP70|CD9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
19109410
|
| Organism |
Mus musculus |
| Experiment description |
Proteomic and immunologic analyses of brain tumor exosomes. |
| Authors |
"Graner MW, Alzate O, Dechkovskaia AM, Keene JD, Sampson JH, Mitchell DA, Bigner DD" |
| Journal name |
FASEB
|
| Publication year |
2008 |
| Sample |
Brain cancer cells |
| Sample name |
SMA560vIII |
| Isolation/purification methods |
Differential centrifugation Sucrose density gradient |
| Flotation density |
1.13-1.15 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry [MALDI TOF/TOF] Western blotting |
|
|
| 9 |
| Experiment ID |
907 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
|
Enriched markers |
|
✔
HSPA5
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
Protein
|
| Identification method |
Mass spectrometry
|
| PubMed ID |
37309723
|
| Organism |
Mus musculus |
| Experiment description |
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells |
| Authors |
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S." |
| Journal name |
Proteomics
|
| Publication year |
2023 |
| Sample |
Colon cancer cells |
| Sample name |
C26 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 10 |
| Experiment ID |
311 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
33431899
|
| Organism |
Mus musculus |
| Experiment description |
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance |
| Authors |
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Colorectal cancer cells |
| Sample name |
MC38 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 11 |
| Experiment ID |
312 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
33431899
|
| Organism |
Mus musculus |
| Experiment description |
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance |
| Authors |
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Colorectal cancer cells |
| Sample name |
MC38 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 12 |
| Experiment ID |
3 |
| MISEV standards |
|
✔
IEM
|
Biophysical techniques |
|
✔
HSP84|HSC73|MHCII|CD9|mac-1
|
Enriched markers |
|
✔
CANX|HSP90B1
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Mass spectrometry Western blotting
|
| PubMed ID |
10545503
|
| Organism |
Mus musculus |
| Experiment description |
Molecular characterization of dendritic cell-derived exosomes. Selective accumulation of the heat shock protein hsc73. |
| Authors |
"Thery C, Regnault A, Garin J, Wolfers J, Zitvogel L, Ricciardi-Castagnoli P, Raposo G, Amigorena S." |
| Journal name |
JCB
|
| Publication year |
1999 |
| Sample |
Dendritic cells |
| Sample name |
D1 |
| Isolation/purification methods |
Differential centrifugation Sucrose density gradient |
| Flotation density |
1.14-1.20 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry [MALDI TOF] Western blotting |
|
|
| 13 |
| Experiment ID |
10 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Alix|CD9|MHCII|MHCI|CD86|LAMP2
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
11390481
|
| Organism |
Mus musculus |
| Experiment description |
Proteomic analysis of dendritic cell-derived exosomes: a secreted subcellular compartment distinct from apoptotic vesicles. |
| Authors |
"Thery C, Boussac M, Veron P, Ricciardi-Castagnoli P, Raposo G, Garin J, Amigorena S." |
| Journal name |
JIMMU
|
| Publication year |
2001 |
| Sample |
Dendritic cells |
| Sample name |
D1 |
| Isolation/purification methods |
Differential centrifugation Sucrose density gradient |
| Flotation density |
1.15-1.18 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry [MALDI TOF] Mass spectrometry [QTOF] Western blotting |
|
|
| 14 |
| Experiment ID |
73 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
HSP70|HSP90
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Mass spectrometry
|
| PubMed ID |
18494037
|
| Organism |
Mus musculus |
| Experiment description |
Difference gel electrophoresis analysis of Ras-transformed fibroblast cell-derived exosomes. |
| Authors |
"Ji H, Erfani N, Tauro BJ, Kapp EA, Zhu HJ, Moritz RL, Lim JW, Simpson RJ" |
| Journal name |
ELEC
|
| Publication year |
2008 |
| Sample |
Embryonic fibroblasts |
| Sample name |
NIH3T3 |
| Isolation/purification methods |
Differential centrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry [LCQ DECA] Western blotting |
|
|
| 15 |
| Experiment ID |
303 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd63|Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
33431899
|
| Organism |
Mus musculus |
| Experiment description |
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance |
| Authors |
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Faeces |
| Sample name |
Intestinal epithelial cells - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein Lipid miRNA |
| Methods used in the study |
Western blotting Mass spectrometry Immunofluorescence miRNA array HPLC |
|
|
| 16 |
| Experiment ID |
304 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd63|Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
33431899
|
| Organism |
Mus musculus |
| Experiment description |
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance |
| Authors |
"Kumar A, Sundaram K, Mu J, Dryden GW, Sriwastva MK, Lei C, Zhang L, Qiu X, Xu F, Yan J, Zhang X, Park JW, Merchant ML, Bohler HCL, Wang B, Zhang S, Qin C, Xu Z, Han X, McClain CJ, Teng Y, Zhang HG." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Faeces |
| Sample name |
Intestinal epithelial cells - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient centrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein Lipid miRNA |
| Methods used in the study |
Western blotting Mass spectrometry Immunofluorescence miRNA array HPLC |
|
|
| 17 |
| Experiment ID |
1048 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd63|Tsg101|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Hippocampal neuronal cells |
| Sample name |
HT22 |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 18 |
| Experiment ID |
1049 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd63|Tsg101|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Hippocampal neuronal cells |
| Sample name |
HT22 |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 19 |
| Experiment ID |
1050 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Tsg101|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Hippocampal neuronal cells |
| Sample name |
HT22 |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 20 |
| Experiment ID |
1051 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Tsg101|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Hippocampal neuronal cells |
| Sample name |
HT22 |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 21 |
| Experiment ID |
1057 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Kidney |
| Sample name |
WT mice - Fraction c |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 22 |
| Experiment ID |
1058 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Kidney |
| Sample name |
WT mice - Fraction d |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 23 |
| Experiment ID |
1063 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Kidney |
| Sample name |
KO mice - Fraction d |
| Isolation/purification methods |
Differential centrifugation Filtration Sucrose density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 24 |
| Experiment ID |
1148 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Flot1|Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34580290
|
| Organism |
Mus musculus |
| Experiment description |
Bardet-Biedl syndrome proteins modulate the release of bioactive extracellular vesicles |
| Authors |
"Volz AK, Frei A, Kretschmer V, de Jesus Domingues AM, Ketting RF, Ueffing M, Boldt K, Krämer-Albers EM, May-Simera HL." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Kidney medullary cells |
| Sample name |
Kidney medullary cells - ciliated |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting Mass spectrometry small RNA sequencing |
|
|
| 25 |
| Experiment ID |
1149 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Tsg101|Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34580290
|
| Organism |
Mus musculus |
| Experiment description |
Bardet-Biedl syndrome proteins modulate the release of bioactive extracellular vesicles |
| Authors |
"Volz AK, Frei A, Kretschmer V, de Jesus Domingues AM, Ketting RF, Ueffing M, Boldt K, Krämer-Albers EM, May-Simera HL." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Kidney medullary cells |
| Sample name |
Kidney medullary cells - ciliated |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting Mass spectrometry small RNA sequencing |
|
|
| 26 |
| Experiment ID |
1150 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Flot1|Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34580290
|
| Organism |
Mus musculus |
| Experiment description |
Bardet-Biedl syndrome proteins modulate the release of bioactive extracellular vesicles |
| Authors |
"Volz AK, Frei A, Kretschmer V, de Jesus Domingues AM, Ketting RF, Ueffing M, Boldt K, Krämer-Albers EM, May-Simera HL." |
| Journal name |
Nat Commun
|
| Publication year |
2021 |
| Sample |
Kidney medullary cells |
| Sample name |
Kidney medullary cells - ciliated |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting Mass spectrometry small RNA sequencing |
|
|
| 27 |
| Experiment ID |
214 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✘
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Mass spectrometry
|
| PubMed ID |
23658846
|
| Organism |
Mus musculus |
| Experiment description |
Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis. |
| Authors |
"Hassani K, Olivier M." |
| Journal name |
PLoS Negl Trop Dis
|
| Publication year |
2013 |
| Sample |
Macrophages |
| Sample name |
Leishmania-infected-Macrophage (J774A.1) |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Filtration Protease inhibitors Sucrose density gradient Filtration Ultracentrifugation |
| Flotation density |
1.13-1.19 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry |
|
|
| 28 |
| Experiment ID |
215 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✘
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Mass spectrometry
|
| PubMed ID |
23658846
|
| Organism |
Mus musculus |
| Experiment description |
Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis. |
| Authors |
"Hassani K, Olivier M." |
| Journal name |
PLoS Negl Trop Dis
|
| Publication year |
2013 |
| Sample |
Macrophages |
| Sample name |
LPS-treated-Macrophage (J774A.1) |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Filtration Protease inhibitors Sucrose density gradient Filtration Ultracentrifugation |
| Flotation density |
1.13-1.19 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry |
|
|
| 29 |
| Experiment ID |
216 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✘
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Mass spectrometry
|
| PubMed ID |
23658846
|
| Organism |
Mus musculus |
| Experiment description |
Immunomodulatory impact of leishmania-induced macrophage exosomes: a comparative proteomic and functional analysis. |
| Authors |
"Hassani K, Olivier M." |
| Journal name |
PLoS Negl Trop Dis
|
| Publication year |
2013 |
| Sample |
Macrophages |
| Sample name |
Normal-Macrophage (J774A.1) |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Filtration Protease inhibitors Sucrose density gradient Filtration Ultracentrifugation |
| Flotation density |
1.13-1.19 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry |
|
|
| 30 |
| Experiment ID |
570 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Hsp90|Gapdh|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
36648227
|
| Organism |
Mus musculus |
| Experiment description |
Escherichia coli-Derived Outer Membrane Vesicles Relay Inflammatory Responses to Macrophage-Derived Exosomes |
| Authors |
"Imamiya R, Shinohara A, Yakura D, Yamaguchi T, Ueda K, Oguro A, Minamiyama Y, Ichikawa H, Horiguchi Y, Osada-Oka M." |
| Journal name |
mBio
|
| Publication year |
2023 |
| Sample |
Macrophages |
| Sample name |
RAW264.2 - E. coli infected |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 31 |
| Experiment ID |
571 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Hsp90|Gapdh|Cd9|Cd63
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
36648227
|
| Organism |
Mus musculus |
| Experiment description |
Escherichia coli-Derived Outer Membrane Vesicles Relay Inflammatory Responses to Macrophage-Derived Exosomes |
| Authors |
"Imamiya R, Shinohara A, Yakura D, Yamaguchi T, Ueda K, Oguro A, Minamiyama Y, Ichikawa H, Horiguchi Y, Osada-Oka M." |
| Journal name |
mBio
|
| Publication year |
2023 |
| Sample |
Macrophages |
| Sample name |
RAW264.2 - E. coli infected |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 32 |
| Experiment ID |
1101 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd81|Cd9|Tfrc|Gapdh|Lamp1
|
Enriched markers |
|
✔
GOLGA2|CANX
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34957415
|
| Organism |
Mus musculus |
| Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
| Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
| Journal name |
Nat Cancer
|
| Publication year |
2021 |
| Sample |
Melanoma cells |
| Sample name |
B16-F1 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 33 |
| Experiment ID |
1102 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd81|Cd9|Tfrc|Gapdh|Lamp1
|
Enriched markers |
|
✔
GOLGA2|CANX
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34957415
|
| Organism |
Mus musculus |
| Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
| Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
| Journal name |
Nat Cancer
|
| Publication year |
2021 |
| Sample |
Melanoma cells |
| Sample name |
B16-F10 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry Flow cytometry |
|
|
| 34 |
| Experiment ID |
1103 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd81|Cd9|Tfrc|Gapdh|Lamp1
|
Enriched markers |
|
✔
GOLGA2|CANX
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34957415
|
| Organism |
Mus musculus |
| Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
| Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
| Journal name |
Nat Cancer
|
| Publication year |
2021 |
| Sample |
Melanoma cells |
| Sample name |
B16-F1R2 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry Flow cytometry |
|
|
| 35 |
| Experiment ID |
1104 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34957415
|
| Organism |
Mus musculus |
| Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
| Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
| Journal name |
Nat Cancer
|
| Publication year |
2021 |
| Sample |
Melanoma cells |
| Sample name |
B16-F10 - Fraction 6 |
| Isolation/purification methods |
Differential centrifugation OptiPrep density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 36 |
| Experiment ID |
1105 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34957415
|
| Organism |
Mus musculus |
| Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
| Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
| Journal name |
Nat Cancer
|
| Publication year |
2021 |
| Sample |
Melanoma cells |
| Sample name |
B16-F1R2 - Fraction 5 |
| Isolation/purification methods |
Differential centrifugation OptiPrep density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 37 |
| Experiment ID |
1106 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
34957415
|
| Organism |
Mus musculus |
| Experiment description |
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism |
| Authors |
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H." |
| Journal name |
Nat Cancer
|
| Publication year |
2021 |
| Sample |
Melanoma cells |
| Sample name |
B16-F1R2 - Fraction 6 |
| Isolation/purification methods |
Differential centrifugation OptiPrep density gradient centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 38 |
| Experiment ID |
504 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Tsg101|Cd63|Cd9
|
Enriched markers |
|
✔
Canx
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
36253358
|
| Organism |
Mus musculus |
| Experiment description |
Bone marrow mesenchymal stem cell-derived exosomal miR-21a-5p alleviates renal fibrosis by attenuating glycolysis by targeting PFKM |
| Authors |
"Xu S, Cheuk YC, Jia Y, Chen T, Chen J, Luo Y, Cao Y, Guo J, Dong L, Zhang Y, Shi Y, Rong R." |
| Journal name |
Cell Death Dis
|
| Publication year |
2022 |
| Sample |
Mesenchymal stem cells |
| Sample name |
Bone marrow-derived MSCs |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting miRNA sequencing qPCR |
|
|
| 39 |
| Experiment ID |
14 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
RAB7|RAB11|CD9|CD63|LAMP1|LAMP2
|
Enriched markers |
|
✔
DNM
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Mass spectrometry Western blotting
|
| PubMed ID |
16081791
|
| Organism |
Mus musculus |
| Experiment description |
Proteomic analysis of microglia-derived exosomes: metabolic role of the aminopeptidase CD13 in neuropeptide catabolism. |
| Authors |
"Potolicchio I, Carven GJ, Xu X, Stipp C, Riese RJ, Stern LJ, Santambrogio L" |
| Journal name |
JIMMU
|
| Publication year |
2005 |
| Sample |
Microglia |
| Sample name |
N9 |
| Isolation/purification methods |
Differential centrifugation Sucrose density gradient |
| Flotation density |
1.15 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Mass spectrometry [LCQ DECA XP] Western blotting |
|
|
| 40 |
| Experiment ID |
262 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Alix|TSG101|HSP70|HSP90|CD63|CD9|
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
Y
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
25242146
|
| Organism |
Mus musculus |
| Experiment description |
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells |
| Authors |
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino" |
| Journal name |
Molecular Cell
|
| Publication year |
2014 |
| Sample |
Neural stem cells |
| Sample name |
NPCs |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient |
| Flotation density |
1.13-1.20 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry Microarray |
|
|
| 41 |
| Experiment ID |
263 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
CD63|CD9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
25242146
|
| Organism |
Mus musculus |
| Experiment description |
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells |
| Authors |
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino" |
| Journal name |
Molecular Cell
|
| Publication year |
2014 |
| Sample |
Neural stem cells |
| Sample name |
NPCs - Th1 treated |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient |
| Flotation density |
1.13-1.20 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 42 |
| Experiment ID |
264 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
CD63|CD9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
25242146
|
| Organism |
Mus musculus |
| Experiment description |
Extracellular Vesicles from Neural Stem Cells Transfer IFN-? via Ifngr1 to Activate Stat1 Signaling in Target Cells |
| Authors |
"Chiara Cossetti, Nunzio Iraci, Tim R. Mercer, Tommaso Leonardi, Emanuele Alpi, Denise Drago, Clara Alfaro-Cervello, Harpreet K. Saini, Matthew P. Davis, Julia Schaeffer, Beatriz Vega, Matilde Stefanini, CongJian Zhao, Werner Muller, Jose Manuel Garcia-Verdugo, Suresh Mathivanan, Angela Bachi, Anton J. Enright, John S. Mattick, Stefano Pluchino" |
| Journal name |
Molecular Cell
|
| Publication year |
2014 |
| Sample |
Neural stem cells |
| Sample name |
NPCs - Th2 treated |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation Sucrose density gradient |
| Flotation density |
1.13-1.20 g/mL
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 43 |
| Experiment ID |
315 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
33199621
|
| Organism |
Mus musculus |
| Experiment description |
Delivery of muscle-derived exosomal miRNAs induced by HIIT improves insulin sensitivity through down-regulation of hepatic FoxO1 in mice |
| Authors |
"Castaño C, Mirasierra M, Vallejo M, Novials A, Párrizas M." |
| Journal name |
Proc Natl Acad Sci U S A
|
| Publication year |
2020 |
| Sample |
Plasma |
| Sample name |
Plasma - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting RT-PCT |
|
|
| 44 |
| Experiment ID |
316 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Cd63|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
33199621
|
| Organism |
Mus musculus |
| Experiment description |
Delivery of muscle-derived exosomal miRNAs induced by HIIT improves insulin sensitivity through down-regulation of hepatic FoxO1 in mice |
| Authors |
"Castaño C, Mirasierra M, Vallejo M, Novials A, Párrizas M." |
| Journal name |
Proc Natl Acad Sci U S A
|
| Publication year |
2020 |
| Sample |
Plasma |
| Sample name |
Plasma - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein miRNA |
| Methods used in the study |
Western blotting RT-PCT |
|
|
| 45 |
| Experiment ID |
333 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
32132711
|
| Organism |
Mus musculus |
| Experiment description |
Decoy exosomes provide protection against bacterial toxins |
| Authors |
"Keller MD, Ching KL, Liang FX, Dhabaria A, Tam K, Ueberheide BM, Unutmaz D, Torres VJ, Cadwell K." |
| Journal name |
Nature
|
| Publication year |
2020 |
| Sample |
Plasma |
| Sample name |
Plasma - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 46 |
| Experiment ID |
334 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
32132711
|
| Organism |
Mus musculus |
| Experiment description |
Decoy exosomes provide protection against bacterial toxins |
| Authors |
"Keller MD, Ching KL, Liang FX, Dhabaria A, Tam K, Ueberheide BM, Unutmaz D, Torres VJ, Cadwell K." |
| Journal name |
Nature
|
| Publication year |
2020 |
| Sample |
Plasma |
| Sample name |
Plasma - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 47 |
| Experiment ID |
335 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd81|Cd9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
32132711
|
| Organism |
Mus musculus |
| Experiment description |
Decoy exosomes provide protection against bacterial toxins |
| Authors |
"Keller MD, Ching KL, Liang FX, Dhabaria A, Tam K, Ueberheide BM, Unutmaz D, Torres VJ, Cadwell K." |
| Journal name |
Nature
|
| Publication year |
2020 |
| Sample |
Plasma |
| Sample name |
Plasma - C57BL/6 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 48 |
| Experiment ID |
1052 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Tsg101|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Podocytes |
| Sample name |
MPC-5 |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 49 |
| Experiment ID |
1053 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
Cd63|Tsg101|Cd9
|
Enriched markers |
|
✔
CANX
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
30967557
|
| Organism |
Mus musculus |
| Experiment description |
KIBRA controls exosome secretion via inhibiting the proteasomal degradation of Rab27a |
| Authors |
"Song L, Tang S, Han X, Jiang Z, Dong L, Liu C, Liang X, Dong J, Qiu C, Wang Y, Du Y." |
| Journal name |
Nat Commun
|
| Publication year |
2019 |
| Sample |
Podocytes |
| Sample name |
MPC-5 |
| Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
| 50 |
| Experiment ID |
908 |
| MISEV standards |
|
✔
EM
|
Biophysical techniques |
|
✔
Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a
|
Enriched markers |
|
✔
HSPA5
|
Negative markers |
|
✔
NTA
|
Particle analysis
|
|
| Identified molecule |
Protein
|
| Identification method |
Mass spectrometry
|
| PubMed ID |
37309723
|
| Organism |
Mus musculus |
| Experiment description |
Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells |
| Authors |
"Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S." |
| Journal name |
Proteomics
|
| Publication year |
2023 |
| Sample |
T-cell lymphoma cells |
| Sample name |
EL4 |
| Isolation/purification methods |
Differential centrifugation Ultracentrifugation |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting Mass spectrometry |
|
|
| 51 |
| Experiment ID |
60 |
| MISEV standards |
|
✘
|
Biophysical techniques |
|
✔
CD9
|
Enriched markers |
|
✘
|
Negative markers |
|
✘
|
Particle analysis
|
|
| Identified molecule |
protein
|
| Identification method |
Western blotting
|
| PubMed ID |
17700640
|
| Organism |
Mus musculus |
| Experiment description |
CD24 is a marker of exosomes secreted into urine and amniotic fluid. |
| Authors |
"Keller S, Rupp C, Stoeck A, Runz S, Fogel M, Lugert S, Hager HD, Abdel-Bakky MS, Gutwein P, Altevogt P" |
| Journal name |
KI
|
| Publication year |
2007 |
| Sample |
Urine |
| Sample name |
Urine - Normal |
| Isolation/purification methods |
Differential centrifugation Sucrose density gradient |
| Flotation density |
-
|
| Molecules identified in the study |
Protein |
| Methods used in the study |
Western blotting |
|
|
Protein-protein interactions for Cd9 |
| |
Protein Interactor |
ExoCarta ID |
Identification method |
PubMed |
Species |
|
No interactions are found.
|
|
Pathways in which Cd9 is involved |
|
|
|