Gene description for INPP5D
Gene name inositol polyphosphate-5-phosphatase, 145kDa
Gene symbol INPP5D
Other names/aliases SHIP
SHIP-1
SHIP1
SIP-145
hp51CN
p150Ship
Species Homo sapiens
 Database cross references - INPP5D
ExoCarta ExoCarta_3635
Vesiclepedia VP_3635
Entrez Gene 3635
HGNC 6079
MIM 601582
UniProt Q92835  
 INPP5D identified in sEVs derived from the following tissue/cell type
Platelets 25332113    
Platelets 25332113    
Platelets 25332113    
Thymus 23844026    
 Gene ontology annotations for INPP5D
Molecular Function
    phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0004439 IEA
    inositol-polyphosphate 5-phosphatase activity GO:0004445 IDA
    protein binding GO:0005515 IPI
    phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity GO:0016314 TAS
    SH3 domain binding GO:0017124 IEA
    phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity GO:0034485 TAS
    inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity GO:0052659 IEA
Biological Process
    phosphatidylinositol biosynthetic process GO:0006661 TAS
    phosphate-containing compound metabolic process GO:0006796 TAS
    apoptotic process GO:0006915 IEA
    signal transduction GO:0007165 TAS
    determination of adult lifespan GO:0008340 IEA
    negative regulation of signal transduction GO:0009968 IBA
    immunoglobulin mediated immune response GO:0016064 IEA
    negative regulation of B cell proliferation GO:0030889 IEA
    negative regulation of interleukin-6 production GO:0032715 IEA
    intracellular signal transduction GO:0035556 IEA
    positive regulation of apoptotic process GO:0043065 IEA
    positive regulation of B cell differentiation GO:0045579 IBA
    positive regulation of erythrocyte differentiation GO:0045648 IEA
    negative regulation of monocyte differentiation GO:0045656 IEA
    negative regulation of neutrophil differentiation GO:0045659 IBA
    negative regulation of osteoclast differentiation GO:0045671 IEA
    negative regulation of bone resorption GO:0045779 IBA
    negative regulation of natural killer cell mediated cytotoxicity GO:0045953 IDA
    phosphatidylinositol dephosphorylation GO:0046856 IEA
    regulation of immune response GO:0050776 IBA
    T cell receptor signaling pathway GO:0050852 TAS
Subcellular Localization
    cytoplasm GO:0005737 IDA
    cytosol GO:0005829 IBA
    cytosol GO:0005829 IDA
    cytosol GO:0005829 TAS
    cytoskeleton GO:0005856 IEA
    plasma membrane GO:0005886 IEA
    membrane raft GO:0045121 IEA
 Experiment description of studies that identified INPP5D in sEVs
1
Experiment ID 231
MISEV standards
Biophysical techniques
Alix|CD63|CD9
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 232
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 233
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for INPP5D
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 KRTAP10-7  
Two-hybrid Homo sapiens
2 ATG16L1 55054
Affinity Capture-MS Homo sapiens
3 Gab2  
Affinity Capture-Western Mus musculus
4 NOTCH2NL 388677
Two-hybrid Homo sapiens
5 DOK2 9046
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
6 PTPN11 5781
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
7 KHDRBS3  
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
8 XIAP  
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
9 NCK1 4690
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
10 DAB2 1601
Reconstituted Complex Homo sapiens
11 FCGR1B  
Protein-peptide Homo sapiens
12 GRB2 2885
Protein-peptide Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
13 SHC1 6464
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
14 PRKCD 5580
Affinity Capture-Western Homo sapiens
15 KIF14 9928
Affinity Capture-MS Homo sapiens
16 CD22 933
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
17 INPPL1 3636
Affinity Capture-MS Homo sapiens
18 MME 4311
Affinity Capture-MS Homo sapiens
19 ZDHHC17 23390
Two-hybrid Homo sapiens
20 CD2AP 23607
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
21 DAB1 1600
Two-hybrid Homo sapiens
22 CLYBL  
Affinity Capture-Western Homo sapiens
23 SH3KBP1 30011
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
24 KRTAP10-3  
Two-hybrid Homo sapiens
25 SLAMF1 6504
Affinity Capture-Western Homo sapiens
26 LYN 4067
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
27 CBL 867
Affinity Capture-Western Homo sapiens
28 TLR9  
Affinity Capture-MS Homo sapiens
29 IL4R  
Reconstituted Complex Homo sapiens
30 DOK1 1796
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
31 CEBPA  
Protein-peptide Homo sapiens
32 LRRK1 79705
Affinity Capture-MS Homo sapiens
33 UBASH3B 84959
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
34 CYSRT1 375791
Two-hybrid Homo sapiens
35 KIT 3815
Reconstituted Complex Homo sapiens
36 CRKL 1399
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
37 TRIP10 9322
Affinity Capture-MS Homo sapiens
38 FCGR2B  
Protein-peptide Homo sapiens
39 KRT40  
Two-hybrid Homo sapiens
40 PIK3R1 5295
Affinity Capture-Western Homo sapiens
41 SYK 6850
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
42 BCR 613
Affinity Capture-Western Homo sapiens
43 KRTAP1-3  
Two-hybrid Homo sapiens
44 KRT31 3881
Two-hybrid Homo sapiens
45 PECAM1 5175
Reconstituted Complex Homo sapiens
Far Western Homo sapiens
46 KRTAP6-3  
Two-hybrid Homo sapiens
47 ARAP1 116985
Two-hybrid Homo sapiens
48 EPOR  
PCA Homo sapiens
49 KRTAP10-9  
Two-hybrid Homo sapiens
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here