Gene description for Grin1
Gene name glutamate receptor, ionotropic, N-methyl D-aspartate 1
Gene symbol Grin1
Other names/aliases GluN1
NMDAR1
NR1
Species Rattus norvegicus
 Database cross references - Grin1
ExoCarta ExoCarta_24408
Vesiclepedia VP_24408
Entrez Gene 24408
UniProt P35439  
 Grin1 identified in sEVs derived from the following tissue/cell type
Cortical neurones 16446100    
 Gene ontology annotations for Grin1
Molecular Function
    amyloid-beta binding GO:0001540 IDA
    glutamate-gated receptor activity GO:0004970 IDA
    glutamate-gated receptor activity GO:0004970 TAS
    NMDA glutamate receptor activity GO:0004972 IBA
    NMDA glutamate receptor activity GO:0004972 IDA
    NMDA glutamate receptor activity GO:0004972 IGI
    NMDA glutamate receptor activity GO:0004972 IMP
    NMDA glutamate receptor activity GO:0004972 ISO
    NMDA glutamate receptor activity GO:0004972 ISO
    NMDA glutamate receptor activity GO:0004972 TAS
    signaling receptor binding GO:0005102 IPI
    signaling receptor binding GO:0005102 ISO
    monoatomic cation channel activity GO:0005261 ISO
    calcium channel activity GO:0005262 ISO
    calcium channel activity GO:0005262 ISO
    calcium ion binding GO:0005509 ISO
    protein binding GO:0005515 IPI
    calmodulin binding GO:0005516 ISO
    ligand-gated monoatomic ion channel activity GO:0015276 IBA
    ligand-gated monoatomic ion channel activity GO:0015276 IEA
    ligand-gated sodium channel activity GO:0015280 ISO
    ligand-gated sodium channel activity GO:0015280 ISS
    glycine binding GO:0016594 IDA
    glycine binding GO:0016594 ISO
    glutamate binding GO:0016595 IDA
    glutamate binding GO:0016595 ISO
    enzyme binding GO:0019899 IPI
    phosphatase binding GO:0019902 IDA
    transmitter-gated monoatomic ion channel activity GO:0022824 IDA
    voltage-gated monoatomic cation channel activity GO:0022843 IMP
    glutamate-gated calcium ion channel activity GO:0022849 ISO
    glutamate-gated calcium ion channel activity GO:0022849 ISS
    glutamate receptor binding GO:0035254 IPI
    ionotropic glutamate receptor binding GO:0035255 IPI
    signaling receptor activity GO:0038023 IBA
    signaling receptor activity GO:0038023 IEA
    protein-containing complex binding GO:0044877 IDA
    protein-containing complex binding GO:0044877 IPI
    ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential GO:0099507 EXP
    ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential GO:0099507 IDA
    ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential GO:0099507 IMP
    transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:1904315 IDA
    transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential GO:1904315 IMP
Biological Process
    conditioned taste aversion GO:0001661 ISO
    response to hypoxia GO:0001666 IEP
    startle response GO:0001964 ISO
    suckling behavior GO:0001967 ISO
    response to amphetamine GO:0001975 ISO
    transcription by RNA polymerase II GO:0006366 ISO
    monoatomic cation transport GO:0006812 ISO
    monoatomic cation transport GO:0006812 ISO
    calcium ion transport GO:0006816 ISO
    intracellular calcium ion homeostasis GO:0006874 ISO
    chemical synaptic transmission GO:0007268 IBA
    learning or memory GO:0007611 ISO
    learning or memory GO:0007611 TAS
    learning GO:0007612 ISO
    memory GO:0007613 ISO
    long-term memory GO:0007616 ISO
    associative learning GO:0008306 ISO
    adult locomotory behavior GO:0008344 ISO
    olfactory learning GO:0008355 ISO
    visual learning GO:0008542 ISO
    positive regulation of calcium ion transport into cytosol GO:0010524 IGI
    regulation of cell communication GO:0010646 ISO
    response to organic cyclic compound GO:0014070 IEP
    response to amine GO:0014075 IEP
    propylene metabolic process GO:0018964 ISO
    sensory perception of pain GO:0019233 ISO
    calcium-mediated signaling GO:0019722 IEA
    pons maturation GO:0021586 ISO
    cerebral cortex development GO:0021987 ISO
    monoatomic ion transmembrane transport GO:0034220 IEA
    social behavior GO:0035176 ISO
    ionotropic glutamate receptor signaling pathway GO:0035235 IBA
    ionotropic glutamate receptor signaling pathway GO:0035235 IDA
    ionotropic glutamate receptor signaling pathway GO:0035235 IEA
    ionotropic glutamate receptor signaling pathway GO:0035235 ISO
    ionotropic glutamate receptor signaling pathway GO:0035235 ISO
    ionotropic glutamate receptor signaling pathway GO:0035235 ISS
    synaptic transmission, glutamatergic GO:0035249 ISO
    sodium ion transmembrane transport GO:0035725 ISO
    sodium ion transmembrane transport GO:0035725 ISS
    regulation of membrane potential GO:0042391 IBA
    regulation of membrane potential GO:0042391 ISO
    regulation of membrane potential GO:0042391 ISO
    positive regulation of apoptotic process GO:0043065 ISO
    response to morphine GO:0043278 ISO
    regulation of neuron apoptotic process GO:0043523 ISO
    negative regulation of neuron apoptotic process GO:0043524 ISO
    regulation of respiratory gaseous exchange GO:0043576 ISO
    response to ethanol GO:0045471 ISO
    positive regulation of transcription by RNA polymerase II GO:0045944 ISO
    regulation of synaptic plasticity GO:0048167 ISO
    regulation of synaptic plasticity GO:0048167 ISS
    regulation of neuronal synaptic plasticity GO:0048168 ISO
    regulation of neuronal synaptic plasticity GO:0048168 NAS
    regulation of long-term neuronal synaptic plasticity GO:0048169 ISO
    rhythmic process GO:0048511 IDA
    regulation of dendrite morphogenesis GO:0048814 ISO
    regulation of axonogenesis GO:0050770 ISO
    neuromuscular process GO:0050905 ISO
    protein heterotetramerization GO:0051290 IDA
    response to calcium ion GO:0051592 IEP
    regulation of synapse assembly GO:0051963 ISO
    positive regulation of synaptic transmission, glutamatergic GO:0051968 IDA
    positive regulation of synaptic transmission, glutamatergic GO:0051968 ISS
    calcium ion homeostasis GO:0055074 ISO
    excitatory postsynaptic potential GO:0060079 ISO
    prepulse inhibition GO:0060134 ISO
    male mating behavior GO:0060179 ISO
    response to fungicide GO:0060992 IEP
    protein-containing complex assembly GO:0065003 IDA
    neuron cellular homeostasis GO:0070050 ISO
    calcium ion transmembrane transport GO:0070588 IDA
    calcium ion transmembrane transport GO:0070588 ISO
    calcium ion transmembrane transport GO:0070588 ISS
    cellular response to manganese ion GO:0071287 IEP
    calcium ion transmembrane import into cytosol GO:0097553 ISO
    monoatomic cation transmembrane transport GO:0098655 IDA
    monoatomic cation transmembrane transport GO:0098655 ISO
    monoatomic cation transmembrane transport GO:0098655 ISS
    regulation of presynaptic membrane potential GO:0099505 IEA
    positive regulation of Schwann cell migration GO:1900149 IMP
    positive regulation of dendritic spine maintenance GO:1902952 IGI
    positive regulation of reactive oxygen species biosynthetic process GO:1903428 IGI
    protein localization to postsynaptic membrane GO:1903539 ISO
    regulation of monoatomic cation transmembrane transport GO:1904062 IDA
    regulation of monoatomic cation transmembrane transport GO:1904062 ISS
    cellular response to amyloid-beta GO:1904646 ISO
    response to glycine GO:1905429 ISO
    cellular response to glycine GO:1905430 IEP
    positive regulation of excitatory postsynaptic potential GO:2000463 IDA
    positive regulation of excitatory postsynaptic potential GO:2000463 ISS
Subcellular Localization
    cytoplasm GO:0005737 IDA
    cytoplasm GO:0005737 ISO
    endoplasmic reticulum GO:0005783 ISO
    endoplasmic reticulum membrane GO:0005789 TAS
    plasma membrane GO:0005886 IBA
    plasma membrane GO:0005886 IDA
    plasma membrane GO:0005886 ISO
    plasma membrane GO:0005886 ISS
    plasma membrane GO:0005886 TAS
    synaptic vesicle GO:0008021 ISO
    cell surface GO:0009986 IDA
    cell surface GO:0009986 ISO
    postsynaptic density GO:0014069 ISO
    membrane GO:0016020 ISO
    basolateral plasma membrane GO:0016323 ISO
    NMDA selective glutamate receptor complex GO:0017146 IBA
    NMDA selective glutamate receptor complex GO:0017146 IDA
    NMDA selective glutamate receptor complex GO:0017146 IEA
    NMDA selective glutamate receptor complex GO:0017146 ISO
    NMDA selective glutamate receptor complex GO:0017146 ISS
    NMDA selective glutamate receptor complex GO:0017146 TAS
    dendrite GO:0030425 ISO
    synaptic vesicle membrane GO:0030672 ISO
    dendrite membrane GO:0032590 IDA
    monoatomic ion channel complex GO:0034702 ISO
    presynaptic membrane GO:0042734 IDA
    presynaptic membrane GO:0042734 IDA
    neuron projection GO:0043005 IBA
    neuronal cell body GO:0043025 IDA
    neuronal cell body GO:0043025 ISO
    synaptic cleft GO:0043083 IDA
    terminal bouton GO:0043195 IDA
    dendritic spine GO:0043197 IDA
    dendritic spine GO:0043197 ISO
    dendritic branch GO:0044307 IDA
    synapse GO:0045202 IBA
    synapse GO:0045202 IDA
    synapse GO:0045202 ISO
    postsynaptic membrane GO:0045211 IDA
    postsynaptic membrane GO:0045211 IEA
    postsynaptic membrane GO:0045211 ISO
    postsynaptic membrane GO:0045211 NAS
    presynaptic active zone membrane GO:0048787 IDA
    excitatory synapse GO:0060076 IDA
    synaptic membrane GO:0097060 IDA
    synaptic membrane GO:0097060 IPI
    synaptic membrane GO:0097060 ISO
    hippocampal mossy fiber to CA3 synapse GO:0098686 IDA
    parallel fiber to Purkinje cell synapse GO:0098688 IDA
    postsynaptic density membrane GO:0098839 IDA
    postsynaptic density membrane GO:0098839 IDA
    postsynaptic density membrane GO:0098839 ISO
    neurotransmitter receptor complex GO:0098878 ISO
    glutamatergic synapse GO:0098978 IDA
    glutamatergic synapse GO:0098978 IMP
    glutamatergic synapse GO:0098978 ISO
 Experiment description of studies that identified Grin1 in sEVs
1
Experiment ID 30
MISEV standards
EM
Biophysical techniques
Alix|TSG101|FLOT
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 16446100    
Organism Rattus norvegicus
Experiment description Exosomes are released by cultured cortical neurones.
Authors "Faure J, Lachenal G, Court M, Hirrlinger J, Chatellard-Causse C, Blot B, Grange J, Schoehn G, Goldberg Y, Boyer V, Kirchhoff F, Raposo G, Garin J, Sadoul R"
Journal name MCN
Publication year 2006
Sample Cortical neurones
Sample name Cortical neurones
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Flotation density 1.13 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [QTOF]
Western blotting
 Protein-protein interactions for Grin1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Grin2a  
Affinity Capture-Western Rattus norvegicus
2 Fbxo2  
Affinity Capture-Western Rattus norvegicus
3 Drd1  
Affinity Capture-Western Rattus norvegicus
Reconstituted Complex Rattus norvegicus
Affinity Capture-Western Rattus norvegicus
4 Grin2a  
Affinity Capture-Western Mus musculus
5 Itm2b 290364
Affinity Capture-MS Rattus norvegicus
6 Ubc  
Affinity Capture-Western Rattus norvegicus
7 Grin2c  
Affinity Capture-Western Mus musculus
8 Grin2b  
Co-fractionation Rattus norvegicus
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here