Gene description for NT5DC1
Gene name 5'-nucleotidase domain containing 1
Gene symbol NT5DC1
Other names/aliases C6orf200
LP2642
NT5C2L1
Species Homo sapiens
 Database cross references - NT5DC1
ExoCarta ExoCarta_221294
Vesiclepedia VP_221294
Entrez Gene 221294
HGNC 21556
UniProt Q5TFE4  
 NT5DC1 identified in sEVs derived from the following tissue/cell type
Chondrocytes 35931686    
Chondrocytes 35931686    
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
 Gene ontology annotations for NT5DC1
Molecular Function
    protein binding GO:0005515 IPI
    5'-nucleotidase activity GO:0008253 IBA
    metal ion binding GO:0046872 IEA
 Experiment description of studies that identified NT5DC1 in sEVs
1
Experiment ID 497
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 498
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 35931686    
Organism Homo sapiens
Experiment description Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors "Varela-Eirín M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, García-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name Cell Death Dis
Publication year 2022
Sample Chondrocytes
Sample name T/C-28a2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 211
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 212
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors "Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for NT5DC1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ACACB 32
Affinity Capture-MS Homo sapiens
2 SERBP1 26135
Affinity Capture-MS Homo sapiens
3 TRABD 80305
Affinity Capture-MS Homo sapiens
4 GFAP 2670
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 SRM 6723
Co-fractionation Homo sapiens
6 HSP90AA4P 3323
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 PKLR 5313
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 HBD 3045
Affinity Capture-MS Homo sapiens
9 UBA3 9039
Co-fractionation Homo sapiens
10 RPA3 6119
Proximity Label-MS Homo sapiens
11 NIF3L1 60491
Co-fractionation Homo sapiens
12 OGT 8473
Reconstituted Complex Homo sapiens
13 UCHL3 7347
Co-fractionation Homo sapiens
14 GPAT2  
Affinity Capture-MS Homo sapiens
15 ECHS1 1892
Co-fractionation Homo sapiens
View the network image/svg+xml
 Pathways in which NT5DC1 is involved
No pathways found





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